RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 PGAM5Q96HS1 289 aa12.11□□□□□ -0.47
SEC61B-201ENST00000223641 PDCD1LG2Q9BQ51 273 aa12.11□□□□□ -0.47
SEC61B-201ENST00000223641 RGCCQ9H4X1 137 aa12.11□□□□□ -0.47
SEC61B-201ENST00000223641 ESRP2Q9H6T0 727 aaKnown RBP12.11□□□□□ -0.47
SEC61B-201ENST00000223641 TUBG2Q9NRH3 451 aa12.11□□□□□ -0.47
SEC61B-201ENST00000223641 CRIM1Q9NZV1 1036 aa12.11□□□□□ -0.47
SEC61B-201ENST00000223641 STARD10Q9Y365 291 aa12.11□□□□□ -0.47
SEC61B-201ENST00000223641 ANKHD1Q8IWZ3 2542 aaKnown RBP12.11□□□□□ -0.47
SEC61B-201ENST00000223641 TENM4Q6N022 2769 aa12.11□□□□□ -0.47
SEC61B-201ENST00000223641 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.1□□□□□ -0.47
SEC61B-201ENST00000223641 DEFB108AA8MXU0 73 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 XRCC2O43543 280 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 SC5DO75845 299 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 NR4A1P22736 598 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 GABRA5P31644 462 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 TTKP33981 857 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 RAD52P43351 418 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 SLC3A1Q07837 685 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 BEX5Q5H9J7 111 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 TMEM244Q5VVB8 128 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 CD200R1LQ6Q8B3 271 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 UNQ6126/PRO20091Q6UXV3 157 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 MS4A15Q8N5U1 240 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 OR5L1Q8NGL2 311 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 OR5AK2Q8NH90 309 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 RGP1Q92546 391 aaPredicted RBP12.1□□□□□ -0.47
SEC61B-201ENST00000223641 ITFG2Q969R8 447 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 RADILQ96JH8 1075 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 LYZL4Q96KX0 146 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 SPOCK3Q9BQ16 436 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 TMEM204Q9BSN7 226 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 REPIN1Q9BWE0 567 aaKnown RBP12.1□□□□□ -0.47
SEC61B-201ENST00000223641 BCL2L14Q9BZR8 327 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 OR10A2Q9H208 303 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 EIF3KQ9UBQ5 218 aaKnown RBP12.1□□□□□ -0.47
SEC61B-201ENST00000223641 ZNF281Q9Y2X9 895 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 CADP27708 2225 aa12.1□□□□□ -0.47
SEC61B-201ENST00000223641 PNMA8CA0A1B0GUJ8 204 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 LOC390937A0A1W2PQ73 354 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 ABCD4O14678 606 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 CASKO14936 926 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 CD36P16671 472 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 ACHEP22303 614 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 GALP22466 123 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 GLRXP35754 106 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 ZNF92Q03936 586 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 SPOCK1Q08629 439 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 DAZAP2Q15038 168 aaPredicted RBP12.09□□□□□ -0.47
SEC61B-201ENST00000223641 TRAM1Q15629 374 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 YIF1BQ5BJH7 314 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 GLYATL3Q5SZD4 288 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 UNQ9370/PRO34162Q6UXP9 181 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 FBXW12Q6X9E4 464 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 RDH10Q8IZV5 341 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 ZNF676Q8N7Q3 588 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 NUP37Q8NFH4 326 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 ABHD4Q8TB40 342 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 OR51E1Q8TCB6 317 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 PLPPR2Q96GM1 343 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 COMMD4Q9H0A8 199 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 POFUT1Q9H488 388 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 OPA3Q9H6K4 179 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 SLC24A3Q9HC58 644 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 GTF2A1LQ9UNN4 478 aa12.09□□□□□ -0.47
SEC61B-201ENST00000223641 TRBV5-5A0A0J9YX44 114 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 ATP6V1G2-DDX39BF2Z307 99 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 P2RY10O00398 339 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 TBX1O43435 398 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 CLDN1O95832 211 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 FAM157BP0CG42 384 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 CFL1P23528 166 aaKnown RBP12.08□□□□□ -0.48
SEC61B-201ENST00000223641 PSMA1P25786 263 aaKnown RBP12.08□□□□□ -0.48
SEC61B-201ENST00000223641 CRYBB2P43320 205 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 PPP1CBP62140 327 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 RPS25P62851 125 aaKnown RBP12.08□□□□□ -0.48
SEC61B-201ENST00000223641 FAM3AP98173 230 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 TNK1Q13470 666 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 GK2Q14410 553 aaPredicted RBP12.08□□□□□ -0.48
SEC61B-201ENST00000223641 DOK3Q7L591 496 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 KRT74Q7RTS7 529 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 GPR141Q7Z602 305 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 CCDC54Q8NEL0 328 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 OR51A4Q8NGJ6 313 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 OR1J1Q8NGS3 322 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 OR14K1Q8NGZ2 314 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 OR10AC1Q8NH08 325 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 OR2AE1Q8NHA4 323 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 MARS2Q96GW9 593 aaKnown RBP12.08□□□□□ -0.48
SEC61B-201ENST00000223641 REEP6Q96HR9 211 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 KCNS3Q9BQ31 491 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 SOX7Q9BT81 388 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 GPR84Q9NQS5 396 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 HHLA2Q9UM44 414 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 SPEF1Q9Y4P9 236 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 N6AMT1Q9Y5N5 214 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 V9GYS6 101 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 COL12A1Q99715 3063 aa12.08□□□□□ -0.48
SEC61B-201ENST00000223641 hCG_38984A0A1B0GV85 526 aa12.07□□□□□ -0.48
SEC61B-201ENST00000223641 LOC107986453A0A1B0GWG9 222 aa12.07□□□□□ -0.48
SEC61B-201ENST00000223641 FAM221AA4D161 298 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms