RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 ALKBH6Q3KRA9 238 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 OR2G6Q5TZ20 316 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 AGAP6Q5VW22 663 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 C20orf204Q6ZNR8 217 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 RORBQ92753 470 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 SGK3Q96BR1 496 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 LURAP1Q96LR2 239 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 SIGLEC11Q96RL6 698 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 JAM3Q9BX67 310 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 FAIMQ9NVQ4 179 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 GTF2A1LQ9UNN4 478 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 PLEKHA6Q9Y2H5 1048 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 J3QW42 95 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 SLC35A2P78381 396 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 ZNF92Q03936 586 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 PSG7Q13046 419 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 GK2Q14410 553 aaPredicted RBP12.86□□□□□ -0.35
RPA3-201ENST00000223129 SWI5Q1ZZU3 235 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 CNPY1Q3B7I2 92 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 GFOD2Q3B7J2 385 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 MBNL2Q5VZF2 373 aaKnown RBP12.86□□□□□ -0.35
RPA3-201ENST00000223129 FAM220AQ7Z4H9 259 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 C1orf174Q8IYL3 243 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 OR8B12Q8NGG6 310 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 RNF166Q96A37 237 aaPredicted RBP12.86□□□□□ -0.35
RPA3-201ENST00000223129 COG8Q96MW5 612 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 TRAF4Q9BUZ4 470 aaPredicted RBP12.86□□□□□ -0.35
RPA3-201ENST00000223129 PBOV1Q9GZY1 135 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 CBLN4Q9NTU7 201 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 ERVK-18Q9QC07 812 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 TPRKBQ9Y3C4 175 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 R4GMQ9 66 aa12.86□□□□□ -0.35
RPA3-201ENST00000223129 LOC110117498-PIK3R3F6TDL0 507 aa12.85□□□□□ -0.35
RPA3-201ENST00000223129 CDK1P06493 297 aa12.85□□□□□ -0.35
RPA3-201ENST00000223129 MYL12AP19105 171 aa12.85□□□□□ -0.35
RPA3-201ENST00000223129 MMP16P51512 607 aa12.85□□□□□ -0.35
RPA3-201ENST00000223129 KLF3P57682 345 aaPredicted RBP12.85□□□□□ -0.35
RPA3-201ENST00000223129 ACTA2P62736 377 aa12.85□□□□□ -0.35
RPA3-201ENST00000223129 ACTG2P63267 376 aa12.85□□□□□ -0.35
RPA3-201ENST00000223129 MALLQ13021 153 aa12.85□□□□□ -0.35
RPA3-201ENST00000223129 ZNF829Q3KNS6 432 aaPredicted RBP12.85□□□□□ -0.35
RPA3-201ENST00000223129 PAMR1Q6UXH9 720 aa12.85□□□□□ -0.35
RPA3-201ENST00000223129 KCTD20Q7Z5Y7 419 aa12.85□□□□□ -0.35
RPA3-201ENST00000223129 DTX2Q86UW9 622 aa12.85□□□□□ -0.35
RPA3-201ENST00000223129 SPRYD4Q8WW59 207 aaPredicted RBP12.85□□□□□ -0.35
RPA3-201ENST00000223129 PELI1Q96FA3 418 aa12.85□□□□□ -0.35
RPA3-201ENST00000223129 CCL19Q99731 98 aa12.85□□□□□ -0.35
RPA3-201ENST00000223129 DUSP21Q9H596 190 aa12.85□□□□□ -0.35
RPA3-201ENST00000223129 VCX3AQ9NNX9 186 aa12.85□□□□□ -0.35
RPA3-201ENST00000223129 G6PC2Q9NQR9 355 aa12.85□□□□□ -0.35
RPA3-201ENST00000223129 NDUFA13Q9P0J0 144 aa12.85□□□□□ -0.35
RPA3-201ENST00000223129 SLC22A13Q9Y226 551 aa12.85□□□□□ -0.35
RPA3-201ENST00000223129 EXOSC1Q9Y3B2 195 aaKnown RBP12.85□□□□□ -0.35
RPA3-201ENST00000223129 ITPR2Q14571 2701 aa12.85□□□□□ -0.35
RPA3-201ENST00000223129 IGLV3-9A0A075B6K5 115 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 B9A039 149 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 TACSTD2P09758 323 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 ALDH3B1P43353 468 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 CHN2P52757 468 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 EFNB3Q15768 340 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 TIGD6Q17RP2 521 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 RBM48Q5RL73 367 aaKnown RBP12.84□□□□□ -0.35
RPA3-201ENST00000223129 OR2T2Q6IF00 324 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 C11orf71Q6IPW1 123 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 FBXW12Q6X9E4 464 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 ZCCHC24Q8N2G6 241 aaKnown RBP12.84□□□□□ -0.35
RPA3-201ENST00000223129 OR52H1Q8NGJ2 320 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 MYDGFQ969H8 173 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 HAVCR1Q96D42 359 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 SOX7Q9BT81 388 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 OR10A2Q9H208 303 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 SP140LQ9H930 580 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 CHCHD3Q9NX63 227 aaKnown RBP12.84□□□□□ -0.35
RPA3-201ENST00000223129 TAAR3PQ9P1P4 343 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 ST6GALNAC2Q9UJ37 374 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 OR52A1Q9UKL2 312 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 POLQO75417 2590 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 A0A1W2PPW3 197 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 E9PI62 339 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 IGHV3-13P01766 116 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 CD53P19397 219 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 TUBG1P23258 451 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 CDKN1AP38936 164 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 SELENOVP59797 346 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 ODF4Q2M2E3 257 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 PGAP1Q75T13 922 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 OR5AS1Q8N127 324 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 SYS1Q8N2H4 156 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 PRSS35Q8N3Z0 413 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 IGFBPL1Q8WX77 278 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 GATAD2BQ8WXI9 593 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 MRPL48Q96GC5 212 aaKnown RBP12.84□□□□□ -0.35
RPA3-201ENST00000223129 REEP6Q96HR9 211 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 TUBG2Q9NRH3 451 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 CAB39Q9Y376 341 aaPredicted RBP12.84□□□□□ -0.35
RPA3-201ENST00000223129 SNX5Q9Y5X3 404 aa12.84□□□□□ -0.35
RPA3-201ENST00000223129 ARFGEF3Q5TH69 2177 aa12.83□□□□□ -0.36
RPA3-201ENST00000223129 SMIM31A0A1B0GVY4 71 aa12.83□□□□□ -0.36
RPA3-201ENST00000223129 XRCC2O43543 280 aa12.83□□□□□ -0.36
RPA3-201ENST00000223129 TTRP02766 147 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms