RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 AKR1C4P17516 323 aa11.66□□□□□ -0.54
CTNS-201ENST00000046640 CAPZA1P52907 286 aa11.66□□□□□ -0.54
CTNS-201ENST00000046640 RAP1BP61224 184 aa11.66□□□□□ -0.54
CTNS-201ENST00000046640 RAP1AP62834 184 aa11.66□□□□□ -0.54
CTNS-201ENST00000046640 RSPO4Q2I0M5 234 aaPredicted RBP11.66□□□□□ -0.54
CTNS-201ENST00000046640 ATPAF1Q5TC12 328 aaPredicted RBP11.66□□□□□ -0.54
CTNS-201ENST00000046640 ZNF385CQ66K41 422 aaPredicted RBP11.66□□□□□ -0.54
CTNS-201ENST00000046640 FDX2Q6P4F2 183 aa11.66□□□□□ -0.54
CTNS-201ENST00000046640 MR1Q95460 341 aa11.66□□□□□ -0.54
CTNS-201ENST00000046640 PRMT8Q9NR22 394 aaPredicted RBP11.66□□□□□ -0.54
CTNS-201ENST00000046640 COMMD9Q9P000 198 aa11.66□□□□□ -0.54
CTNS-201ENST00000046640 COLQQ9Y215 455 aaPredicted RBP11.66□□□□□ -0.54
CTNS-201ENST00000046640 CPAMD8Q8IZJ3 1885 aa11.66□□□□□ -0.54
CTNS-201ENST00000046640 KANTRA0A1W2PQU2 76 aa11.66□□□□□ -0.54
CTNS-201ENST00000046640 IGHMP01871 453 aa11.66□□□□□ -0.54
CTNS-201ENST00000046640 MECP2P51608 486 aaKnown RBP11.66□□□□□ -0.54
CTNS-201ENST00000046640 TAS2R19P59542 299 aa11.66□□□□□ -0.54
CTNS-201ENST00000046640 CXADRP78310 365 aa11.66□□□□□ -0.54
CTNS-201ENST00000046640 DNM1P34Q6PK57 102 aa11.66□□□□□ -0.54
CTNS-201ENST00000046640 LINC00518Q8N0U6 118 aa11.66□□□□□ -0.54
CTNS-201ENST00000046640 WDSUB1Q8N9V3 476 aa11.66□□□□□ -0.54
CTNS-201ENST00000046640 OR4K17Q8NGC6 315 aa11.66□□□□□ -0.54
CTNS-201ENST00000046640 GPX8Q8TED1 209 aa11.66□□□□□ -0.54
CTNS-201ENST00000046640 ADAMTS20P59510 1910 aa11.66□□□□□ -0.54
CTNS-201ENST00000046640 NAXDQ8IW45 347 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 UEVLDQ8IX04 471 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 OR52N4Q8NGI2 321 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 OR10S1Q8NGN2 331 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 OR13C9Q8NGT0 318 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 OR6K3Q8NGY3 331 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 PPP1R1CQ8WVI7 109 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 ZBTB8AQ96BR9 441 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 ADAT3Q96EY9 351 aaPredicted RBP11.65□□□□□ -0.54
CTNS-201ENST00000046640 POTEKPQ9BYX7 375 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 LDAHQ9H6V9 325 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 KLK13Q9UKR3 277 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 PTRH2Q9Y3E5 179 aaKnown RBP11.65□□□□□ -0.54
CTNS-201ENST00000046640 RER1O15258 196 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 TOX3O15405 576 aaPredicted RBP11.65□□□□□ -0.54
CTNS-201ENST00000046640 SRSF10O75494 262 aaKnown RBP11.65□□□□□ -0.54
CTNS-201ENST00000046640 ITGB2P05107 769 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 DLSTP36957 453 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 PMPCAQ10713 525 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 SHEQ5VZ18 495 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 OR51E1Q8TCB6 317 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 CCDC107Q8WV48 283 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 NUDCD2Q8WVJ2 157 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 ALKBH4Q9NXW9 302 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 PRR13Q9NZ81 148 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 ASH2LQ9UBL3 628 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 PILRBQ9UKJ0 227 aa11.65□□□□□ -0.54
CTNS-201ENST00000046640 F5H0A9 414 aaPredicted RBP11.65□□□□□ -0.55
CTNS-201ENST00000046640 PMS2P2O95744 297 aa11.65□□□□□ -0.55
CTNS-201ENST00000046640 TTRP02766 147 aa11.65□□□□□ -0.55
CTNS-201ENST00000046640 RPA2P15927 270 aa11.65□□□□□ -0.55
CTNS-201ENST00000046640 ACTBP60709 375 aa11.65□□□□□ -0.55
CTNS-201ENST00000046640 ACTG1P63261 375 aa11.65□□□□□ -0.55
CTNS-201ENST00000046640 TOMM20Q15388 145 aa11.65□□□□□ -0.55
CTNS-201ENST00000046640 PMS2CLQ68D20 193 aa11.65□□□□□ -0.55
CTNS-201ENST00000046640 KLHL24Q6TFL4 600 aa11.65□□□□□ -0.55
CTNS-201ENST00000046640 DNM1P46Q6ZS02 220 aa11.65□□□□□ -0.55
CTNS-201ENST00000046640 HSD17B13Q7Z5P4 300 aaPredicted RBP11.65□□□□□ -0.55
CTNS-201ENST00000046640 SPACA9Q96E40 222 aaPredicted RBP11.65□□□□□ -0.55
CTNS-201ENST00000046640 PRO3102Q9H379 93 aa11.65□□□□□ -0.55
CTNS-201ENST00000046640 CNTD2Q9H8S5 307 aa11.65□□□□□ -0.55
CTNS-201ENST00000046640 ASF1BQ9NVP2 202 aa11.65□□□□□ -0.55
CTNS-201ENST00000046640 UPB1Q9UBR1 384 aa11.65□□□□□ -0.55
CTNS-201ENST00000046640 VSIG4Q9Y279 399 aa11.65□□□□□ -0.55
CTNS-201ENST00000046640 B3GALT5Q9Y2C3 310 aa11.65□□□□□ -0.55
CTNS-201ENST00000046640 AHCTF1Q8WYP5 2266 aa11.64□□□□□ -0.55
CTNS-201ENST00000046640 COL5A1P20908 1838 aaPredicted RBP11.64□□□□□ -0.55
CTNS-201ENST00000046640 SYT7O43581 403 aa11.64□□□□□ -0.55
CTNS-201ENST00000046640 ABOP16442 354 aa11.64□□□□□ -0.55
CTNS-201ENST00000046640 C5orf46Q6UWT4 87 aa11.64□□□□□ -0.55
CTNS-201ENST00000046640 ZNF584Q8IVC4 421 aa11.64□□□□□ -0.55
CTNS-201ENST00000046640 OR2M3Q8NG83 312 aa11.64□□□□□ -0.55
CTNS-201ENST00000046640 EDAQ92838 391 aa11.64□□□□□ -0.55
CTNS-201ENST00000046640 LHX6Q9UPM6 363 aa11.64□□□□□ -0.55
CTNS-201ENST00000046640 DNASE2O00115 360 aaPredicted RBP11.64□□□□□ -0.55
CTNS-201ENST00000046640 ZNF208O43345 1280 aa11.64□□□□□ -0.55
CTNS-201ENST00000046640 F12P00748 615 aaPredicted RBP11.64□□□□□ -0.55
CTNS-201ENST00000046640 AKR1D1P51857 326 aa11.64□□□□□ -0.55
CTNS-201ENST00000046640 ZP4Q12836 540 aa11.64□□□□□ -0.55
CTNS-201ENST00000046640 PPP1R1AQ13522 171 aa11.64□□□□□ -0.55
CTNS-201ENST00000046640 ZNF169Q14929 603 aaPredicted RBP11.64□□□□□ -0.55
CTNS-201ENST00000046640 CLVS2Q5SYC1 327 aa11.64□□□□□ -0.55
CTNS-201ENST00000046640 FAM166AQ6J272 317 aa11.64□□□□□ -0.55
CTNS-201ENST00000046640 OR2W3Q7Z3T1 314 aa11.64□□□□□ -0.55
CTNS-201ENST00000046640 OR13C8Q8NGS7 320 aa11.64□□□□□ -0.55
CTNS-201ENST00000046640 SLC22A8Q8TCC7 542 aa11.64□□□□□ -0.55
CTNS-201ENST00000046640 FAM71F1Q96KD3 344 aaPredicted RBP11.64□□□□□ -0.55
CTNS-201ENST00000046640 MRGPRX4Q96LA9 322 aa11.64□□□□□ -0.55
CTNS-201ENST00000046640 PBOV1Q9GZY1 135 aa11.64□□□□□ -0.55
CTNS-201ENST00000046640 C5orf51A6NDU8 294 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 HSPB2A8KAH6 182 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 SULT2B1O00204 365 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 GPR31O00270 319 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 F10P00742 488 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 ZNF43P17038 809 aa11.63□□□□□ -0.55
CTNS-201ENST00000046640 IGFBP3P17936 291 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms