RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 RAB27BO00194 218 aa9.4□□□□□ -0.9
CX3CL1-201ENST00000006053 FBP1P09467 338 aa9.4□□□□□ -0.9
CX3CL1-201ENST00000006053 HLA-DOBP13765 273 aa9.4□□□□□ -0.9
CX3CL1-201ENST00000006053 EDN3P14138 238 aa9.4□□□□□ -0.9
CX3CL1-201ENST00000006053 PSMB6P28072 239 aa9.4□□□□□ -0.9
CX3CL1-201ENST00000006053 NR0B1P51843 470 aaKnown RBP9.4□□□□□ -0.9
CX3CL1-201ENST00000006053 ROM1Q03395 351 aa9.4□□□□□ -0.9
CX3CL1-201ENST00000006053 GLO1Q04760 184 aa9.4□□□□□ -0.9
CX3CL1-201ENST00000006053 ZNF260Q3ZCT1 412 aa9.4□□□□□ -0.9
CX3CL1-201ENST00000006053 FAM76BQ5HYJ3 339 aa9.4□□□□□ -0.9
CX3CL1-201ENST00000006053 NKAPLQ5M9Q1 402 aa9.4□□□□□ -0.9
CX3CL1-201ENST00000006053 PTPMT1Q8WUK0 201 aaPredicted RBP9.4□□□□□ -0.9
CX3CL1-201ENST00000006053 ROBO4Q8WZ75 1007 aa9.4□□□□□ -0.9
CX3CL1-201ENST00000006053 ARL11Q969Q4 196 aa9.4□□□□□ -0.9
CX3CL1-201ENST00000006053 TLNRD1Q9H1K6 362 aa9.4□□□□□ -0.9
CX3CL1-201ENST00000006053 TXNIPQ9H3M7 391 aa9.4□□□□□ -0.9
CX3CL1-201ENST00000006053 UCK1Q9HA47 277 aa9.4□□□□□ -0.9
CX3CL1-201ENST00000006053 NUP210LQ5VU65 1888 aa9.4□□□□□ -0.91
CX3CL1-201ENST00000006053 EPOPA6NHQ4 379 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 LDLRAD4O15165 306 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 NR2C1P13056 603 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 TPT1P13693 172 aaKnown RBP9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 OR1D4P47884 311 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 SRSF4Q08170 494 aaKnown RBP9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 SGCBQ16585 318 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 C16orf54Q6UWD8 224 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 OR52N4Q8NGI2 321 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 OR10R2Q8NGX6 335 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 ZNF519Q8TB69 540 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 AQP3Q92482 292 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 PIK3IP1Q96FE7 263 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 CNTNAP3BQ96NU0 1288 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 SPACA5Q96QH8 159 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 CBY1Q9Y3M2 126 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 TMED7-TICAM2A0A0A6YYA0 188 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 ZNF705EA8MWA4 302 aaPredicted RBP9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 FARS2O95363 451 aaKnown RBP9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 CRHP06850 196 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 FSTP19883 344 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 SLC6A8P48029 635 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 ARRB1P49407 418 aaPredicted RBP9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 YPEL5P62699 121 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 RPP30P78346 268 aaKnown RBP9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 HLA-DQA1Q5Y7H0 255 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 PTGES2Q9H7Z7 377 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 RAB22AQ9UL26 194 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 ASCC3Q8N3C0 2202 aaKnown RBP9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 EFSO43281 561 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 IL11P20809 199 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 CD1CP29017 333 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 NPBWR1P48145 328 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 SLC9A3R2Q15599 337 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 COX15Q7KZN9 410 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 BAP18Q8IXM2 172 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 ZDHHC22Q8N966 263 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 GPR119Q8TDV5 335 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 TGIF2Q9GZN2 237 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 HRH4Q9H3N8 390 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 FAM96BQ9Y3D0 163 aa9.39□□□□□ -0.91
CX3CL1-201ENST00000006053 A0A0A6YYH2 397 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 A6NJ64 397 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 IL2RAP01589 272 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 H2BFMP0C1H6 154 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 PI3P19957 117 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 PGCP20142 388 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 C1orf140Q5VVS0 124 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 TMEM92Q6UXU6 159 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 TMEM200AQ86VY9 491 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 ZNF101Q8IZC7 436 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 OR13C9Q8NGT0 318 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 SLC46A1Q96NT5 459 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 G6PC2Q9NQR9 355 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 DHCR7Q9UBM7 475 aaKnown RBP9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 PCNX3Q9H6A9 2034 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 RP1P56715 2156 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 TMEM150CB9EJG8 249 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 RAB5BP61020 215 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 UNC119Q13432 240 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 CLINT1Q14677 625 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 C1orf100Q5SVJ3 147 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 ZNF585AQ6P3V2 769 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 TTLL10Q6ZVT0 673 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 NAA40Q86UY6 237 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 PAQR4Q8N4S7 273 aaPredicted RBP9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 OR2I1PQ8NGU4 316 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 SVIPQ8NHG7 77 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 RNF141Q8WVD5 230 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 RRNAD1Q96FB5 475 aaKnown RBP9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 VSX1Q9NZR4 365 aaPredicted RBP9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 TCRBV21S2A2A0A5A6 115 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 RHPN2P1A8MT19 583 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 NUDT21O43809 227 aaKnown RBP9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 ADAP1O75689 374 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 AHSA1O95433 338 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 HLA-GP17693 338 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 NFYBP25208 207 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 CRABP1P29762 137 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 NPY4RP50391 375 aa9.38□□□□□ -0.91
CX3CL1-201ENST00000006053 PNLIPRP2P54317 469 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms