RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 ADAT1Q9BUB4 502 aaKnown RBP9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 SPAG17Q6Q759 2223 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 C17orf112F2Z3M2 114 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 DLL1O00548 723 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 PLPP3O14495 311 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 S100A2P29034 98 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 ARL3P36405 182 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 ZNF468Q5VIY5 522 aaPredicted RBP9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 GABRG1Q8N1C3 465 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 DNAJC5GQ8N7S2 189 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 SLC38A9Q8NBW4 561 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 NPEPL1Q8NDH3 523 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 OR13G1Q8NGZ3 307 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 SHARPINQ9H0F6 387 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 PPIL3Q9H2H8 161 aaKnown RBP9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 TRPM7Q96QT4 1865 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 PLXNA1Q9UIW2 1896 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 CCL3P10147 92 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 TPT1P13693 172 aaKnown RBP9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 ATF1P18846 271 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 PTBP1P26599 531 aaKnown RBP eCLIP9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 NUBP1P53384 320 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 HBG1P69891 147 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 HBG2P69892 147 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 AKR1C1Q04828 323 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 BHLHA15Q7RTS1 189 aaPredicted RBP9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 SFTPA2Q8IWL1 248 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 GPR32P1Q8NGA4 272 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 SLC26A1Q9H2B4 701 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 MYOZ1Q9NP98 299 aaPredicted RBP9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 MN1Q10571 1320 aaPredicted RBP9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 GREB1LQ9C091 1923 aaPredicted RBP9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 CEP290O15078 2479 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 A0A1B0GV50 99 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 CLDN1O95832 211 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 GPR12P47775 334 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 LUMP51884 338 aaPredicted RBP9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 GNG3P63215 75 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 CTU2Q2VPK5 515 aaKnown RBP9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 HFEQ30201 348 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 KHDC1LQ5JSQ8 128 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 LGI3Q8N145 548 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 C17orf47Q8NEP4 570 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 ZG16BQ96DA0 208 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 TRMT61AQ96FX7 289 aaKnown RBP9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 RAB1BQ9H0U4 201 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 SSUH2Q9Y2M2 353 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 M0QYG6 137 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 AIPO00170 330 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 AGFG2O95081 481 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 ZNF883P0CG24 379 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 RAB13P51153 203 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 SUB1P53999 127 aaKnown RBP eCLIP9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 RTL8BQ17RB0 113 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 BEST4Q8NFU0 473 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 CLDN23Q96B33 292 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 ZC3H10Q96K80 434 aaKnown RBP9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 TMEM246Q9BRR3 403 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 LRP12Q9Y561 859 aa9.28□□□□□ -0.92
NIPAL3-201ENST00000003912 ATG2BQ96BY7 2078 aa9.27□□□□□ -0.92
NIPAL3-201ENST00000003912 PCP4L1A6NKN8 68 aa9.27□□□□□ -0.92
NIPAL3-201ENST00000003912 NPIPB8E9PQR5 432 aa9.27□□□□□ -0.92
NIPAL3-201ENST00000003912 MAGEB4O15481 346 aaPredicted RBP9.27□□□□□ -0.92
NIPAL3-201ENST00000003912 PABPC1L2AQ5JQF8 200 aa9.27□□□□□ -0.92
NIPAL3-201ENST00000003912 TMEM200AQ86VY9 491 aa9.27□□□□□ -0.92
NIPAL3-201ENST00000003912 RBMXL3Q8N7X1 1067 aaKnown RBP9.27□□□□□ -0.92
NIPAL3-201ENST00000003912 OR6X1Q8NH79 312 aa9.27□□□□□ -0.92
NIPAL3-201ENST00000003912 OR2AE1Q8NHA4 323 aa9.27□□□□□ -0.92
NIPAL3-201ENST00000003912 GIMAP1Q8WWP7 306 aa9.27□□□□□ -0.92
NIPAL3-201ENST00000003912 SLC25A46Q96AG3 418 aa9.27□□□□□ -0.92
NIPAL3-201ENST00000003912 SPSB1Q96BD6 273 aa9.27□□□□□ -0.92
NIPAL3-201ENST00000003912 PLA2G12AQ9BZM1 189 aa9.27□□□□□ -0.92
NIPAL3-201ENST00000003912 HEYLQ9NQ87 328 aaPredicted RBP9.27□□□□□ -0.92
NIPAL3-201ENST00000003912 CHST2Q9Y4C5 530 aa9.27□□□□□ -0.92
NIPAL3-201ENST00000003912 A3GALT2U3KPV4 340 aa9.27□□□□□ -0.92
NIPAL3-201ENST00000003912 A0A1W2PR80 420 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 ZNF705EA8MWA4 302 aaPredicted RBP9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 ZNF32P17041 273 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 KLF3P57682 345 aaPredicted RBP9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 OTPQ5XKR4 325 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 C20orf141Q9NUB4 165 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 A0A1W2PR77 199 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 FITM1A5D6W6 292 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 FABP1P07148 127 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 FAHP16930 419 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 PTPN6P29350 595 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 ZNF136P52737 540 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 FMODQ06828 376 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 DBPQ10586 325 aaPredicted RBP9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 GK2Q14410 553 aaPredicted RBP9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 H2BFWTQ7Z2G1 175 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 OSR2Q8N2R0 312 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 OR6K3Q8NGY3 331 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 TMEM74BQ9NUR3 256 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 UGT2A1Q9Y4X1 527 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 TRGV10A0A0A0MS01 117 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 MEIOCA2RUB1 952 aa9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 HOXD4P09016 255 aaPredicted RBP9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 APEX1P27695 318 aaKnown RBP9.27□□□□□ -0.93
NIPAL3-201ENST00000003912 RAP2BP61225 183 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms