RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 TMEM100Q9NV29 134 aa21.25■□□□□ 0.99
VEGFA-232ENST00000640653 COMMD3-BMI1R4GMX3 469 aa21.25■□□□□ 0.99
VEGFA-232ENST00000640653 TMEM178BH3BS89 294 aa21.24■□□□□ 0.99
VEGFA-232ENST00000640653 ACOT8O14734 319 aa21.24■□□□□ 0.99
VEGFA-232ENST00000640653 CST1P01037 141 aa21.24■□□□□ 0.99
VEGFA-232ENST00000640653 RPS27P42677 84 aaKnown RBP21.24■□□□□ 0.99
VEGFA-232ENST00000640653 MMP16P51512 607 aa21.24■□□□□ 0.99
VEGFA-232ENST00000640653 LCN2P80188 198 aa21.24■□□□□ 0.99
VEGFA-232ENST00000640653 HNRNPA0Q13151 305 aaKnown RBP21.24■□□□□ 0.99
VEGFA-232ENST00000640653 GK2Q14410 553 aaPredicted RBP21.24■□□□□ 0.99
VEGFA-232ENST00000640653 ZNRF4Q8WWF5 429 aa21.24■□□□□ 0.99
VEGFA-232ENST00000640653 PATZ1Q9HBE1 687 aaKnown RBP21.24■□□□□ 0.99
VEGFA-232ENST00000640653 DDX28Q9NUL7 540 aaKnown RBP21.24■□□□□ 0.99
VEGFA-232ENST00000640653 LOC105371242A0A075B767 164 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 A0A0A6YYJ9 748 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 AQP12BA6NM10 295 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 RIIAD1A6NNX1 92 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 ZNF3P17036 446 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 HOXB6P17509 224 aaKnown RBP21.23■□□□□ 0.99
VEGFA-232ENST00000640653 SPI1P17947 270 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 MDH2P40926 338 aaKnown RBP21.23■□□□□ 0.99
VEGFA-232ENST00000640653 SLC6A9P48067 706 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 ENTPD1P49961 510 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 ZMYND11Q15326 602 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 LYPD4Q6UWN0 246 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 CD300LDQ6UXZ3 194 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 C1orf229Q6ZS94 237 aaPredicted RBP21.23■□□□□ 0.99
VEGFA-232ENST00000640653 PGAP1Q75T13 922 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 TRPM8Q7Z2W7 1104 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 DCXRQ7Z4W1 244 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 NAA40Q86UY6 237 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 AQP12AQ8IXF9 295 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 ADGRG5Q8IZF4 528 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 MUC20Q8N307 709 aaPredicted RBP21.23■□□□□ 0.99
VEGFA-232ENST00000640653 OR10S1Q8NGN2 331 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 TEX47Q8TBZ9 253 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 GIPC3Q8TF64 312 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 SLCO4A1Q96BD0 722 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 NIPSNAP1Q9BPW8 284 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 NMNAT2Q9BZQ4 307 aa21.23■□□□□ 0.99
VEGFA-232ENST00000640653 DYSFO75923 2080 aa21.22■□□□□ 0.99
VEGFA-232ENST00000640653 PPIAL4EA0A075B759 164 aa21.22■□□□□ 0.99
VEGFA-232ENST00000640653 PPIAL4CA0A0B4J2A2 164 aa21.22■□□□□ 0.99
VEGFA-232ENST00000640653 ARRDC5A6NEK1 342 aa21.22■□□□□ 0.99
VEGFA-232ENST00000640653 PPIAL4DF5H284 164 aa21.22■□□□□ 0.99
VEGFA-232ENST00000640653 H0YL77 283 aa21.22■□□□□ 0.99
VEGFA-232ENST00000640653 GNGT2O14610 69 aa21.22■□□□□ 0.99
VEGFA-232ENST00000640653 MLNRO43193 412 aa21.22■□□□□ 0.99
VEGFA-232ENST00000640653 AVPP01185 164 aa21.22■□□□□ 0.99
VEGFA-232ENST00000640653 GYPBP06028 91 aa21.22■□□□□ 0.99
VEGFA-232ENST00000640653 SPARCP09486 303 aa21.22■□□□□ 0.99
VEGFA-232ENST00000640653 PPIAL4FP0DN26 164 aa21.22■□□□□ 0.99
VEGFA-232ENST00000640653 BLVRAP53004 296 aa21.22■□□□□ 0.99
VEGFA-232ENST00000640653 MRPL21Q7Z2W9 205 aaKnown RBP21.22■□□□□ 0.99
VEGFA-232ENST00000640653 C1QL2Q7Z5L3 287 aa21.22■□□□□ 0.99
VEGFA-232ENST00000640653 OR6K6Q8NGW6 343 aa21.22■□□□□ 0.99
VEGFA-232ENST00000640653 SPRYD4Q8WW59 207 aaPredicted RBP21.22■□□□□ 0.99
VEGFA-232ENST00000640653 FEVQ99581 238 aa21.22■□□□□ 0.99
VEGFA-232ENST00000640653 COPS4Q9BT78 406 aa21.22■□□□□ 0.99
VEGFA-232ENST00000640653 A0A1B0GWJ7 208 aa21.21■□□□□ 0.99
VEGFA-232ENST00000640653 DHRS12A0PJE2 317 aa21.21■□□□□ 0.99
VEGFA-232ENST00000640653 F5H5P2 479 aa21.21■□□□□ 0.99
VEGFA-232ENST00000640653 H3BN98 237 aa21.21■□□□□ 0.99
VEGFA-232ENST00000640653 OTX1P32242 354 aaPredicted RBP21.21■□□□□ 0.99
VEGFA-232ENST00000640653 RBMXP38159 391 aaKnown RBP21.21■□□□□ 0.99
VEGFA-232ENST00000640653 TAF13Q15543 124 aa21.21■□□□□ 0.99
VEGFA-232ENST00000640653 DNAL1Q4LDG9 190 aa21.21■□□□□ 0.99
VEGFA-232ENST00000640653 TEX30Q5JUR7 227 aa21.21■□□□□ 0.99
VEGFA-232ENST00000640653 DRAM2Q6UX65 266 aa21.21■□□□□ 0.99
VEGFA-232ENST00000640653 ZNF420Q8TAQ5 688 aaPredicted RBP21.21■□□□□ 0.99
VEGFA-232ENST00000640653 ZNF418Q8TF45 676 aaPredicted RBP21.21■□□□□ 0.99
VEGFA-232ENST00000640653 C7orf69Q9H7B7 122 aa21.21■□□□□ 0.99
VEGFA-232ENST00000640653 CMC2Q9NRP2 79 aa21.21■□□□□ 0.99
VEGFA-232ENST00000640653 NOP16Q9Y3C1 178 aaKnown RBP21.21■□□□□ 0.99
VEGFA-232ENST00000640653 LRRC30A6NM36 301 aa21.2■□□□□ 0.98
VEGFA-232ENST00000640653 ZNF593O00488 134 aaPredicted RBP21.2■□□□□ 0.98
VEGFA-232ENST00000640653 GYG2O15488 501 aa21.2■□□□□ 0.98
VEGFA-232ENST00000640653 EPHA1P21709 976 aa21.2■□□□□ 0.98
VEGFA-232ENST00000640653 ZFP36P26651 326 aaKnown RBP21.2■□□□□ 0.98
VEGFA-232ENST00000640653 PRSS12P56730 875 aa21.2■□□□□ 0.98
VEGFA-232ENST00000640653 PCK2Q16822 640 aa21.2■□□□□ 0.98
VEGFA-232ENST00000640653 ZNF181Q2M3W8 571 aa21.2■□□□□ 0.98
VEGFA-232ENST00000640653 MOGAT3Q86VF5 341 aa21.2■□□□□ 0.98
VEGFA-232ENST00000640653 C1orf87Q8N0U7 546 aa21.2■□□□□ 0.98
VEGFA-232ENST00000640653 ZNF511Q8NB15 262 aa21.2■□□□□ 0.98
VEGFA-232ENST00000640653 NANPQ8TBE9 248 aa21.2■□□□□ 0.98
VEGFA-232ENST00000640653 BCAS4Q8TDM0 211 aa21.2■□□□□ 0.98
VEGFA-232ENST00000640653 CANT1Q8WVQ1 401 aa21.2■□□□□ 0.98
VEGFA-232ENST00000640653 SLAMF6Q96DU3 332 aa21.2■□□□□ 0.98
VEGFA-232ENST00000640653 F5H0A9 414 aaPredicted RBP21.19■□□□□ 0.98
VEGFA-232ENST00000640653 HLA-DPB1P04440 258 aa21.19■□□□□ 0.98
VEGFA-232ENST00000640653 CLUP10909 449 aa21.19■□□□□ 0.98
VEGFA-232ENST00000640653 PSKH1P11801 424 aa21.19■□□□□ 0.98
VEGFA-232ENST00000640653 GRK5P34947 590 aa21.19■□□□□ 0.98
VEGFA-232ENST00000640653 RAD23AP54725 363 aa21.19■□□□□ 0.98
VEGFA-232ENST00000640653 SNAI3Q3KNW1 292 aa21.19■□□□□ 0.98
VEGFA-232ENST00000640653 CELF2-AS1Q8N7Q2 184 aa21.19■□□□□ 0.98
VEGFA-232ENST00000640653 KCNJ15Q99712 375 aa21.19■□□□□ 0.98
VEGFA-232ENST00000640653 SLC22A4Q9H015 551 aa21.19■□□□□ 0.98
VEGFA-232ENST00000640653 CENPMQ9NSP4 180 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms