RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 HRH1P35367 487 aa17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 GNALP38405 381 aa17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 INPP5JQ15735 1006 aaPredicted RBP17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 CCDC157Q569K6 752 aa17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 OR52N4Q8NGI2 321 aa17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 ST8SIA1Q92185 356 aa17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 FAM117AQ9C073 453 aa17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 FBLN5Q9UBX5 448 aa17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 NDRG3Q9UGV2 375 aa17.93■□□□□ 0.46
SYNGAP1-227ENST00000638142 F5H0A9 414 aaPredicted RBP17.92■□□□□ 0.46
SYNGAP1-227ENST00000638142 TTRP02766 147 aa17.92■□□□□ 0.46
SYNGAP1-227ENST00000638142 VSIG8P0DPA2 414 aa17.92■□□□□ 0.46
SYNGAP1-227ENST00000638142 SLC2A4RGQ9NR83 387 aa17.92■□□□□ 0.46
SYNGAP1-227ENST00000638142 EFSO43281 561 aa17.92■□□□□ 0.46
SYNGAP1-227ENST00000638142 IFNA6P05013 189 aa17.92■□□□□ 0.46
SYNGAP1-227ENST00000638142 ERCC1P07992 297 aaPredicted RBP17.92■□□□□ 0.46
SYNGAP1-227ENST00000638142 AVPR2P30518 371 aa17.92■□□□□ 0.46
SYNGAP1-227ENST00000638142 GPR85P60893 370 aa17.92■□□□□ 0.46
SYNGAP1-227ENST00000638142 HSD11B2P80365 405 aa17.92■□□□□ 0.46
SYNGAP1-227ENST00000638142 OR7A5Q15622 319 aa17.92■□□□□ 0.46
SYNGAP1-227ENST00000638142 KLHL24Q6TFL4 600 aa17.92■□□□□ 0.46
SYNGAP1-227ENST00000638142 NARS2Q96I59 477 aaKnown RBP17.92■□□□□ 0.46
SYNGAP1-227ENST00000638142 MBD2Q9UBB5 411 aa17.92■□□□□ 0.46
SYNGAP1-227ENST00000638142 SLC5A6Q9Y289 635 aa17.92■□□□□ 0.46
SYNGAP1-227ENST00000638142 RP1P56715 2156 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 IGKV1D-43A0A0B4J1Z2 117 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 OR2AT4A6NND4 320 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 SYT7O43581 403 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 VAMP1P23763 118 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 ARL4DP49703 201 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 ARHGDIBP52566 201 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 HSF1Q00613 529 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 SLC22A6Q4U2R8 563 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 RHOUQ7L0Q8 258 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 PRSS58Q8IYP2 241 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 VN1R1Q9GZP7 353 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 PCDH15Q96QU1 1955 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 ANKUB1A6NFN9 424 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 SHISA7A6NL88 538 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 TAS2R31P59538 309 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 POU3F1Q03052 451 aaPredicted RBP17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 Q6ZS52 159 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 OR10H5Q8NGA6 315 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 OR5D14Q8NGL3 314 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 OR1L3Q8NH93 324 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 CASTOR1Q8WTX7 329 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 SLAMF6Q96DU3 332 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 ADAT3Q96EY9 351 aaPredicted RBP17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 ARL5BQ96KC2 179 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 SAV1Q9H4B6 383 aaPredicted RBP17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 PCDHB10Q9UN67 800 aa17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 RANBP2P49792 3224 aaKnown RBP17.91■□□□□ 0.46
SYNGAP1-227ENST00000638142 SEC16AO15027 2179 aa17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 DBX1A6NMT0 343 aa17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 GNB3P16520 340 aa17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 TLE3Q04726 772 aa17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 ZNF529Q6P280 563 aa17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 WDFY1Q8IWB7 410 aa17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 ADAD2Q8NCV1 583 aaKnown RBP17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 OR10R2Q8NGX6 335 aa17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 STOML3Q8TAV4 291 aa17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 PBOV1Q9GZY1 135 aa17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 PTGES2Q9H7Z7 377 aa17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 CHST11Q9NPF2 352 aa17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 TMEM218A2RU14 115 aa17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 RHPN2P1A8MT19 583 aa17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 H7C2Y5 167 aa17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 CRHP06850 196 aa17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 AKR1C4P17516 323 aa17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 PSMB6P28072 239 aa17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 APOBEC1P41238 236 aaKnown RBP17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 KCTD9Q7L273 389 aa17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 CHMP1AQ9HD42 196 aaPredicted RBP17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 MED29Q9NX70 200 aa17.9■□□□□ 0.46
SYNGAP1-227ENST00000638142 TMEM14DPA8MWL7 114 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 ZNF208O43345 1280 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 CD38P28907 300 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 CLDN6P56747 220 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 DEFB133Q30KQ1 61 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 C14orf28Q4W4Y0 310 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 CARFQ8N187 725 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 OR4K17Q8NGC6 315 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 RLN3Q8WXF3 142 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 C11orf40Q8WZ69 217 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 TSNAXQ99598 290 aaKnown RBP17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 SELENOIQ9C0D9 397 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 SLC39A1Q9NY26 324 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 GON4LQ3T8J9 2241 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 PCP4L1A6NKN8 68 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 EEF1E1-BLOC1S5C9J1V9 151 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 SSX5O60225 188 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 AWAT2Q6E213 333 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 OGFOD3Q6PK18 319 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 HOGA1Q86XE5 327 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 SVBPQ8N300 66 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 OR5AP2Q8NGF4 316 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 OR1S2Q8NGQ3 325 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 ELP5Q8TE02 316 aa17.89■□□□□ 0.45
SYNGAP1-227ENST00000638142 NMES1Q9C002 83 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms