RNA–Protein interactions for RNA: ENST00000636355.1

CLN3-248, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 975 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-248ENST00000636355 C1QTNF9P0C862 333 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 CD37P11049 281 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 SFTPCP11686 197 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 IGFBP3P17936 291 aaPredicted RBP9.25□□□□□ -0.93
CLN3-248ENST00000636355 TNFSF8P32971 234 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 TALDO1P37837 337 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 NR4A2P43354 598 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 HTR5AP47898 357 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 TDGF1P3P51864 188 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 ZNF181Q2M3W8 571 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 CEP78Q5JTW2 689 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 C1orf185Q5T7R7 199 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 ZNF529Q6P280 563 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 C16orf87Q6PH81 154 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 UNQ6494/PRO21346Q6UXR6 183 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 PGAP1Q75T13 922 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 NUFIP2Q7Z417 695 aaKnown RBP9.25□□□□□ -0.93
CLN3-248ENST00000636355 LRRTM1Q86UE6 522 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 SERPINA12Q8IW75 414 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 LAX1Q8IWV1 398 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 UBE2J2Q8N2K1 259 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 GDPD1Q8N9F7 314 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 OR51A4Q8NGJ6 313 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 OR1K1Q8NGR3 316 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 OR10AC1Q8NH08 325 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 PP6455Q8WZ26 134 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 EXTL1Q92935 676 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 ZNF775Q96BV0 537 aaPredicted RBP9.25□□□□□ -0.93
CLN3-248ENST00000636355 FOXRED1Q96CU9 486 aaPredicted RBP9.25□□□□□ -0.93
CLN3-248ENST00000636355 WNT5BQ9H1J7 359 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 OR10A2Q9H208 303 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 TP63Q9H3D4 680 aaPredicted RBP9.25□□□□□ -0.93
CLN3-248ENST00000636355 OBP2BQ9NPH6 170 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 ZNF275Q9NSD4 429 aaPredicted RBP9.25□□□□□ -0.93
CLN3-248ENST00000636355 SPATA2Q9UM82 520 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 CLEC4AQ9UMR7 237 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 V9GYH0 126 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 ASPMQ8IZT6 3477 aa9.25□□□□□ -0.93
CLN3-248ENST00000636355 TPRP12270 2363 aaKnown RBP9.24□□□□□ -0.93
CLN3-248ENST00000636355 A0A1B0GTI1 187 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 K7EM74 188 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 SLC17A2O00624 439 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 CTDSP2O14595 271 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 XRCC2O43543 280 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 DHRS3O75911 302 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 SERPINA5P05154 406 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 ITGA5P08648 1049 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 SLC6A9P48067 706 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 SOX2P48431 317 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 PRKXP51817 358 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 CXADRP78310 365 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 PSG4Q00888 419 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 PLP2Q04941 152 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 FAPQ12884 760 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 UBE2NLQ5JXB2 153 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 IDNKQ5T6J7 187 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 ZBTB37Q5TC79 503 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 GLT8D1Q68CQ7 371 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 XKRXQ6PP77 449 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 LUZP2Q86TE4 346 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 SKA3Q8IX90 412 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 Q8NA96 180 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 MINDY2Q8NBR6 621 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 OR5D14Q8NGL3 314 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 OR6M1Q8NGM8 313 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 TRMT10AQ8TBZ6 339 aaKnown RBP9.24□□□□□ -0.93
CLN3-248ENST00000636355 ZCCHC14Q8WYQ9 949 aaKnown RBP9.24□□□□□ -0.93
CLN3-248ENST00000636355 CPNE2Q96FN4 548 aaPredicted RBP9.24□□□□□ -0.93
CLN3-248ENST00000636355 PGAM5Q96HS1 289 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 UQCC2Q9BRT2 126 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 SFXN3Q9BWM7 321 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 MIXL1Q9H2W2 232 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 PLEKHA1Q9HB21 404 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 SLC24A3Q9HC58 644 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 ABCB9Q9NP78 766 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 CYSLTR2Q9NS75 346 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 ZNF224Q9NZL3 707 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 DAPK2Q9UIK4 370 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 SPTA1P02549 2419 aa9.24□□□□□ -0.93
CLN3-248ENST00000636355 MGAQ8IWI9 3026 aa9.23□□□□□ -0.93
CLN3-248ENST00000636355 DMXL2Q8TDJ6 3036 aa9.23□□□□□ -0.93
CLN3-248ENST00000636355 TRAV8-7A0A075B6U6 113 aa9.23□□□□□ -0.93
CLN3-248ENST00000636355 P2RY10O00398 339 aa9.23□□□□□ -0.93
CLN3-248ENST00000636355 ICMTO60725 284 aa9.23□□□□□ -0.93
CLN3-248ENST00000636355 UPK1BO75841 260 aa9.23□□□□□ -0.93
CLN3-248ENST00000636355 NCR1O76036 304 aa9.23□□□□□ -0.93
CLN3-248ENST00000636355 IGHV3-9P01782 118 aa9.23□□□□□ -0.93
CLN3-248ENST00000636355 ABOP16442 354 aa9.23□□□□□ -0.93
CLN3-248ENST00000636355 ZNF20P17024 532 aa9.23□□□□□ -0.93
CLN3-248ENST00000636355 ATF1P18846 271 aa9.23□□□□□ -0.93
CLN3-248ENST00000636355 THBS4P35443 961 aa9.23□□□□□ -0.93
CLN3-248ENST00000636355 DDOSTP39656 456 aa9.23□□□□□ -0.93
CLN3-248ENST00000636355 KIR2DL2P43627 348 aaPredicted RBP9.23□□□□□ -0.93
CLN3-248ENST00000636355 EVX1P49640 407 aa9.23□□□□□ -0.93
CLN3-248ENST00000636355 OR10A3P58181 314 aa9.23□□□□□ -0.93
CLN3-248ENST00000636355 GALK2Q01415 458 aa9.23□□□□□ -0.93
CLN3-248ENST00000636355 RBPJQ06330 500 aa9.23□□□□□ -0.93
CLN3-248ENST00000636355 P2RY6Q15077 328 aa9.23□□□□□ -0.93
CLN3-248ENST00000636355 PABPC1L2AQ5JQF8 200 aa9.23□□□□□ -0.93
CLN3-248ENST00000636355 ZNF774Q6NX45 483 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms