RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 COQ7Q99807 217 aa16.6■□□□□ 0.25
TARDBP-228ENST00000629725 HDHD2Q9H0R4 259 aa16.6■□□□□ 0.25
TARDBP-228ENST00000629725 FN3KRPQ9HA64 309 aa16.6■□□□□ 0.25
TARDBP-228ENST00000629725 TRIM36Q9NQ86 728 aa16.6■□□□□ 0.25
TARDBP-228ENST00000629725 POLR1DQ9Y2S0 133 aa16.6■□□□□ 0.25
TARDBP-228ENST00000629725 CAB39Q9Y376 341 aaPredicted RBP16.6■□□□□ 0.25
TARDBP-228ENST00000629725 RYR3Q15413 4870 aa16.59■□□□□ 0.25
TARDBP-228ENST00000629725 KHDRBS3O75525 346 aaKnown RBP16.59■□□□□ 0.25
TARDBP-228ENST00000629725 FBP1P09467 338 aa16.59■□□□□ 0.25
TARDBP-228ENST00000629725 GK2Q14410 553 aaPredicted RBP16.59■□□□□ 0.25
TARDBP-228ENST00000629725 NANOGP8Q6NSW7 305 aa16.59■□□□□ 0.25
TARDBP-228ENST00000629725 FAM122BQ7Z309 247 aa16.59■□□□□ 0.25
TARDBP-228ENST00000629725 VMO1Q7Z5L0 202 aa16.59■□□□□ 0.25
TARDBP-228ENST00000629725 GALNT4Q8N4A0 578 aa16.59■□□□□ 0.25
TARDBP-228ENST00000629725 FAM156AQ8NDB6 213 aa16.59■□□□□ 0.25
TARDBP-228ENST00000629725 ZNF583Q96ND8 569 aa16.59■□□□□ 0.25
TARDBP-228ENST00000629725 SYT4Q9H2B2 425 aa16.59■□□□□ 0.25
TARDBP-228ENST00000629725 ZNRD1Q9P1U0 126 aa16.59■□□□□ 0.25
TARDBP-228ENST00000629725 TRAV38-1A0A0B4J264 116 aa16.58■□□□□ 0.24
TARDBP-228ENST00000629725 OR10H3O60404 316 aa16.58■□□□□ 0.24
TARDBP-228ENST00000629725 ECDO95905 644 aaPredicted RBP16.58■□□□□ 0.24
TARDBP-228ENST00000629725 HERPUD1Q15011 391 aa16.58■□□□□ 0.24
TARDBP-228ENST00000629725 C11orf91Q3C1V1 193 aa16.58■□□□□ 0.24
TARDBP-228ENST00000629725 CDONQ4KMG0 1287 aa16.58■□□□□ 0.24
TARDBP-228ENST00000629725 COLCA1Q6ZS62 124 aa16.58■□□□□ 0.24
TARDBP-228ENST00000629725 NPRL2Q8WTW4 380 aa16.58■□□□□ 0.24
TARDBP-228ENST00000629725 TSPEARQ8WU66 669 aa16.58■□□□□ 0.24
TARDBP-228ENST00000629725 TPD52L3Q96J77 140 aa16.58■□□□□ 0.24
TARDBP-228ENST00000629725 SEMA6AQ9H2E6 1030 aa16.58■□□□□ 0.24
TARDBP-228ENST00000629725 CNTD2Q9H8S5 307 aa16.58■□□□□ 0.24
TARDBP-228ENST00000629725 NMNAT1Q9HAN9 279 aaPredicted RBP16.58■□□□□ 0.24
TARDBP-228ENST00000629725 RHCGQ9UBD6 479 aa16.58■□□□□ 0.24
TARDBP-228ENST00000629725 DNAH3Q8TD57 4116 aa16.58■□□□□ 0.24
TARDBP-228ENST00000629725 A0A1B0GVI7 797 aa16.57■□□□□ 0.24
TARDBP-228ENST00000629725 ANKRD61A6NGH8 418 aa16.57■□□□□ 0.24
TARDBP-228ENST00000629725 OOEPA6NGQ2 149 aa16.57■□□□□ 0.24
TARDBP-228ENST00000629725 GYPAP02724 150 aa16.57■□□□□ 0.24
TARDBP-228ENST00000629725 KRR1Q13601 381 aaKnown RBP16.57■□□□□ 0.24
TARDBP-228ENST00000629725 CYLC2Q14093 348 aaPredicted RBP16.57■□□□□ 0.24
TARDBP-228ENST00000629725 OR8G1Q15617 311 aa16.57■□□□□ 0.24
TARDBP-228ENST00000629725 ZBED5Q49AG3 693 aa16.57■□□□□ 0.24
TARDBP-228ENST00000629725 CYBRD1Q53TN4 286 aa16.57■□□□□ 0.24
TARDBP-228ENST00000629725 RABL3Q5HYI8 236 aa16.57■□□□□ 0.24
TARDBP-228ENST00000629725 SLC35E4Q6ICL7 350 aa16.57■□□□□ 0.24
TARDBP-228ENST00000629725 CALHM3Q86XJ0 350 aa16.57■□□□□ 0.24
TARDBP-228ENST00000629725 RNF113BQ8IZP6 322 aaKnown RBP16.57■□□□□ 0.24
TARDBP-228ENST00000629725 SPRYD4Q8WW59 207 aaPredicted RBP16.57■□□□□ 0.24
TARDBP-228ENST00000629725 DYDC1Q8WWB3 177 aa16.57■□□□□ 0.24
TARDBP-228ENST00000629725 PPP1R14AQ96A00 147 aa16.57■□□□□ 0.24
TARDBP-228ENST00000629725 ATP6V1G3Q96LB4 118 aa16.57■□□□□ 0.24
TARDBP-228ENST00000629725 SH3GL1Q99961 368 aa16.57■□□□□ 0.24
TARDBP-228ENST00000629725 FBLN5Q9UBX5 448 aa16.57■□□□□ 0.24
TARDBP-228ENST00000629725 RPS6KA6Q9UK32 745 aa16.57■□□□□ 0.24
TARDBP-228ENST00000629725 KPTNQ9Y664 436 aa16.57■□□□□ 0.24
TARDBP-228ENST00000629725 CDC42EP2O14613 210 aa16.56■□□□□ 0.24
TARDBP-228ENST00000629725 DVL1O14640 695 aa16.56■□□□□ 0.24
TARDBP-228ENST00000629725 GPR37O15354 613 aa16.56■□□□□ 0.24
TARDBP-228ENST00000629725 ZNF26P17031 533 aaPredicted RBP16.56■□□□□ 0.24
TARDBP-228ENST00000629725 GPR4P46093 362 aa16.56■□□□□ 0.24
TARDBP-228ENST00000629725 YAP1P46937 504 aaKnown RBP16.56■□□□□ 0.24
TARDBP-228ENST00000629725 LOXL3P58215 753 aa16.56■□□□□ 0.24
TARDBP-228ENST00000629725 HIST1H3AP68431 136 aa16.56■□□□□ 0.24
TARDBP-228ENST00000629725 MALLQ13021 153 aa16.56■□□□□ 0.24
TARDBP-228ENST00000629725 TRAM2Q15035 370 aa16.56■□□□□ 0.24
TARDBP-228ENST00000629725 KCNMB1Q16558 191 aa16.56■□□□□ 0.24
TARDBP-228ENST00000629725 RSPO1Q2MKA7 263 aaPredicted RBP16.56■□□□□ 0.24
TARDBP-228ENST00000629725 LRRC23Q53EV4 343 aaPredicted RBP16.56■□□□□ 0.24
TARDBP-228ENST00000629725 HIST2H3PS2Q5TEC6 136 aa16.56■□□□□ 0.24
TARDBP-228ENST00000629725 HIST2H3AQ71DI3 136 aa16.56■□□□□ 0.24
TARDBP-228ENST00000629725 PGAP1Q75T13 922 aa16.56■□□□□ 0.24
TARDBP-228ENST00000629725 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.56■□□□□ 0.24
TARDBP-228ENST00000629725 SLCO4A1Q96BD0 722 aa16.56■□□□□ 0.24
TARDBP-228ENST00000629725 FNDC11Q9BVV2 318 aa16.56■□□□□ 0.24
TARDBP-228ENST00000629725 NDEL1Q9GZM8 345 aa16.56■□□□□ 0.24
TARDBP-228ENST00000629725 SLC22A4Q9H015 551 aa16.56■□□□□ 0.24
TARDBP-228ENST00000629725 NUAK2Q9H093 628 aa16.56■□□□□ 0.24
TARDBP-228ENST00000629725 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.56■□□□□ 0.24
TARDBP-228ENST00000629725 VSX1Q9NZR4 365 aaPredicted RBP16.56■□□□□ 0.24
TARDBP-228ENST00000629725 RPUSD1Q9UJJ7 312 aaKnown RBP16.56■□□□□ 0.24
TARDBP-228ENST00000629725 NOP16Q9Y3C1 178 aaKnown RBP16.56■□□□□ 0.24
TARDBP-228ENST00000629725 LHFPL6Q9Y693 200 aa16.56■□□□□ 0.24
TARDBP-228ENST00000629725 NOTCH3Q9UM47 2321 aa16.55■□□□□ 0.24
TARDBP-228ENST00000629725 IMPA2O14732 288 aa16.55■□□□□ 0.24
TARDBP-228ENST00000629725 FCN3O75636 299 aa16.55■□□□□ 0.24
TARDBP-228ENST00000629725 CA6P23280 308 aa16.55■□□□□ 0.24
TARDBP-228ENST00000629725 SDHAP31040 664 aa16.55■□□□□ 0.24
TARDBP-228ENST00000629725 GABRA5P31644 462 aa16.55■□□□□ 0.24
TARDBP-228ENST00000629725 MEP1BQ16820 701 aa16.55■□□□□ 0.24
TARDBP-228ENST00000629725 ERICH5Q6P6B1 374 aa16.55■□□□□ 0.24
TARDBP-228ENST00000629725 CORO6Q6QEF8 472 aa16.55■□□□□ 0.24
TARDBP-228ENST00000629725 METAP1DQ6UB28 335 aaPredicted RBP16.55■□□□□ 0.24
TARDBP-228ENST00000629725 ZNF730Q6ZMV8 503 aa16.55■□□□□ 0.24
TARDBP-228ENST00000629725 OFCC1Q8IZS5 231 aa16.55■□□□□ 0.24
TARDBP-228ENST00000629725 PLPP7Q8NBV4 271 aa16.55■□□□□ 0.24
TARDBP-228ENST00000629725 ST8SIA4Q92187 359 aa16.55■□□□□ 0.24
TARDBP-228ENST00000629725 COL7A1Q02388 2944 aa16.55■□□□□ 0.24
TARDBP-228ENST00000629725 F5H5K5 113 aa16.54■□□□□ 0.24
TARDBP-228ENST00000629725 J3KTA2 159 aa16.54■□□□□ 0.24
TARDBP-228ENST00000629725 PTBP3O95758 552 aaKnown RBP16.54■□□□□ 0.24
TARDBP-228ENST00000629725 ACSM4P0C7M7 580 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms