RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 HRH1P35367 487 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 ATP1B3P54709 279 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 LPCAT3Q6P1A2 487 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 Q7L0L9 218 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 RNF144BQ7Z419 303 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 SLC22A24Q8N4F4 322 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 OR10S1Q8NGN2 331 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 DDIT4LQ96D03 193 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 MRPS24Q96EL2 167 aaKnown RBP10.02□□□□□ -0.81
VARS2-213ENST00000625423 SPACA5Q96QH8 159 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 SLC7A5P2Q9GIP4 190 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 SLC25A32Q9H2D1 315 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 SLC2A8Q9NY64 477 aa10.02□□□□□ -0.81
VARS2-213ENST00000625423 TMEM200CA6NKL6 621 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 TRIM77I1YAP6 450 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 SIGLEC5O15389 551 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 STK17BO94768 372 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 DCNP07585 359 aaKnown RBP10.01□□□□□ -0.81
VARS2-213ENST00000625423 IL13RA1P78552 427 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 QRFPP83859 136 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 SIGLEC14Q08ET2 396 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 EIF4E3Q8N5X7 224 aaKnown RBP10.01□□□□□ -0.81
VARS2-213ENST00000625423 CASTOR1Q8WTX7 329 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 ZNF75AQ96N20 296 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 SELENOIQ9C0D9 397 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 CYB5R1Q9UHQ9 305 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 SPAG17Q6Q759 2223 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 COL5A1P20908 1838 aaPredicted RBP10.01□□□□□ -0.81
VARS2-213ENST00000625423 C9orf170A2RU37 121 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 LIPT2A6NK58 231 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 EFNA2O43921 213 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 STARP49675 285 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 CLDN6P56747 220 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 SRSF4Q08170 494 aaKnown RBP10.01□□□□□ -0.81
VARS2-213ENST00000625423 C12orf4Q9NQ89 552 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 IFT46Q9NQC8 304 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 SERINC1Q9NRX5 453 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 RASL12Q9NYN1 266 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 SLC5A6Q9Y289 635 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 FER1L5A0AVI2 2057 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 RNF222A6NCQ9 220 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 VSTM2BA6NLU5 285 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 OR2AT4A6NND4 320 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 BPNT1O95861 308 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 SLC25A4P12235 298 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 AKR1C4P17516 323 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 VAMP1P23763 118 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 DLSTP36957 453 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 AWAT2Q6E213 333 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 TFAP2EQ6VUC0 442 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 ANGPTL5Q86XS5 388 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 ADAD2Q8NCV1 583 aaKnown RBP10.01□□□□□ -0.81
VARS2-213ENST00000625423 OR5D14Q8NGL3 314 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 OR51E1Q8TCB6 317 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 NICN1Q9BSH3 213 aa10.01□□□□□ -0.81
VARS2-213ENST00000625423 ZNF471Q9BX82 626 aaPredicted RBP10.01□□□□□ -0.81
VARS2-213ENST00000625423 OR2F2O95006 317 aa10□□□□□ -0.81
VARS2-213ENST00000625423 APOC3P02656 99 aa10□□□□□ -0.81
VARS2-213ENST00000625423 ERCC1P07992 297 aaPredicted RBP10□□□□□ -0.81
VARS2-213ENST00000625423 FOSL2P15408 326 aa10□□□□□ -0.81
VARS2-213ENST00000625423 RAB3AP20336 220 aa10□□□□□ -0.81
VARS2-213ENST00000625423 OR2F1Q13607 317 aa10□□□□□ -0.81
VARS2-213ENST00000625423 ELP2Q6IA86 826 aa10□□□□□ -0.81
VARS2-213ENST00000625423 PTCRAQ6ISU1 281 aaPredicted RBP10□□□□□ -0.81
VARS2-213ENST00000625423 ATRAIDQ6UW56 229 aa10□□□□□ -0.81
VARS2-213ENST00000625423 CFAP77Q6ZQR2 320 aa10□□□□□ -0.81
VARS2-213ENST00000625423 KCTD9Q7L273 389 aa10□□□□□ -0.81
VARS2-213ENST00000625423 ANKRD37Q7Z713 158 aa10□□□□□ -0.81
VARS2-213ENST00000625423 CARFQ8N187 725 aa10□□□□□ -0.81
VARS2-213ENST00000625423 MITD1Q8WV92 249 aa10□□□□□ -0.81
VARS2-213ENST00000625423 SOX7Q9BT81 388 aa10□□□□□ -0.81
VARS2-213ENST00000625423 SEC61A2Q9H9S3 476 aa10□□□□□ -0.81
VARS2-213ENST00000625423 KLRF1Q9NZS2 232 aa10□□□□□ -0.81
VARS2-213ENST00000625423 B3GAT1Q9P2W7 334 aa10□□□□□ -0.81
VARS2-213ENST00000625423 KCNK7Q9Y2U2 307 aa10□□□□□ -0.81
VARS2-213ENST00000625423 NPIPB13A6NJU9 1138 aa10□□□□□ -0.81
VARS2-213ENST00000625423 NPIPB4C9JG80 1138 aa10□□□□□ -0.81
VARS2-213ENST00000625423 ZNF208O43345 1280 aa10□□□□□ -0.81
VARS2-213ENST00000625423 BCL2L11O43521 198 aa10□□□□□ -0.81
VARS2-213ENST00000625423 PMP2P02689 132 aa10□□□□□ -0.81
VARS2-213ENST00000625423 SLC2A1P11166 492 aa10□□□□□ -0.81
VARS2-213ENST00000625423 LAP3P28838 519 aa10□□□□□ -0.81
VARS2-213ENST00000625423 ZNF345Q14585 488 aa10□□□□□ -0.81
VARS2-213ENST00000625423 ZNF273Q14593 569 aa10□□□□□ -0.81
VARS2-213ENST00000625423 ZNF101Q8IZC7 436 aa10□□□□□ -0.81
VARS2-213ENST00000625423 ZDHHC22Q8N966 263 aa10□□□□□ -0.81
VARS2-213ENST00000625423 SLC38A9Q8NBW4 561 aa10□□□□□ -0.81
VARS2-213ENST00000625423 NFAM1Q8NET5 270 aaPredicted RBP10□□□□□ -0.81
VARS2-213ENST00000625423 OR2I1PQ8NGU4 316 aa10□□□□□ -0.81
VARS2-213ENST00000625423 PHB2Q99623 299 aa10□□□□□ -0.81
VARS2-213ENST00000625423 UQCC2Q9BRT2 126 aa10□□□□□ -0.81
VARS2-213ENST00000625423 B3GALT5Q9Y2C3 310 aa10□□□□□ -0.81
VARS2-213ENST00000625423 EEF1E1-BLOC1S5C9J1V9 151 aa10□□□□□ -0.81
VARS2-213ENST00000625423 KCNAB3O43448 404 aa10□□□□□ -0.81
VARS2-213ENST00000625423 SSX5O60225 188 aa10□□□□□ -0.81
VARS2-213ENST00000625423 IL2RAP01589 272 aa10□□□□□ -0.81
VARS2-213ENST00000625423 IFNA6P05013 189 aa10□□□□□ -0.81
VARS2-213ENST00000625423 HEXBP07686 556 aa10□□□□□ -0.81
VARS2-213ENST00000625423 GLB1P16278 677 aa10□□□□□ -0.81
VARS2-213ENST00000625423 ABOP16442 354 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms