RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 FHL1Q13642 323 aa12.11□□□□□ -0.47
PNKP-218ENST00000625299 OR8G1Q15617 311 aa12.11□□□□□ -0.47
PNKP-218ENST00000625299 CYBRD1Q53TN4 286 aa12.11□□□□□ -0.47
PNKP-218ENST00000625299 RABL3Q5HYI8 236 aa12.11□□□□□ -0.47
PNKP-218ENST00000625299 KPRPQ5T749 579 aaPredicted RBP12.11□□□□□ -0.47
PNKP-218ENST00000625299 CORO6Q6QEF8 472 aa12.11□□□□□ -0.47
PNKP-218ENST00000625299 BTN2A1Q7KYR7 527 aa12.11□□□□□ -0.47
PNKP-218ENST00000625299 REC114Q7Z4M0 266 aa12.11□□□□□ -0.47
PNKP-218ENST00000625299 CELF2-AS1Q8N7Q2 184 aa12.11□□□□□ -0.47
PNKP-218ENST00000625299 SPRYD4Q8WW59 207 aaPredicted RBP12.11□□□□□ -0.47
PNKP-218ENST00000625299 ST8SIA4Q92187 359 aa12.11□□□□□ -0.47
PNKP-218ENST00000625299 COQ7Q99807 217 aa12.11□□□□□ -0.47
PNKP-218ENST00000625299 ONECUT1Q9UBC0 465 aa12.11□□□□□ -0.47
PNKP-218ENST00000625299 DNAJB11Q9UBS4 358 aa12.11□□□□□ -0.47
PNKP-218ENST00000625299 ATPIF1Q9UII2 106 aa12.11□□□□□ -0.47
PNKP-218ENST00000625299 RPS6KA6Q9UK32 745 aa12.11□□□□□ -0.47
PNKP-218ENST00000625299 A4GNTQ9UNA3 340 aa12.11□□□□□ -0.47
PNKP-218ENST00000625299 A0A1W2PRD5 423 aa12.1□□□□□ -0.47
PNKP-218ENST00000625299 A0A1W2PRF3 423 aa12.1□□□□□ -0.47
PNKP-218ENST00000625299 A0A1W2PRM7 423 aa12.1□□□□□ -0.47
PNKP-218ENST00000625299 HTR3EA5X5Y0 456 aa12.1□□□□□ -0.47
PNKP-218ENST00000625299 OOEPA6NGQ2 149 aa12.1□□□□□ -0.47
PNKP-218ENST00000625299 TSPAN9O75954 239 aa12.1□□□□□ -0.47
PNKP-218ENST00000625299 CD14P08571 375 aa12.1□□□□□ -0.47
PNKP-218ENST00000625299 FBP1P09467 338 aa12.1□□□□□ -0.47
PNKP-218ENST00000625299 PRKCDQ05655 676 aa12.1□□□□□ -0.47
PNKP-218ENST00000625299 DBPQ10586 325 aaPredicted RBP12.1□□□□□ -0.47
PNKP-218ENST00000625299 GK2Q14410 553 aaPredicted RBP12.1□□□□□ -0.47
PNKP-218ENST00000625299 HERPUD1Q15011 391 aa12.1□□□□□ -0.47
PNKP-218ENST00000625299 MEP1BQ16820 701 aa12.1□□□□□ -0.47
PNKP-218ENST00000625299 ANKDD1AQ495B1 522 aa12.1□□□□□ -0.47
PNKP-218ENST00000625299 NANOGP8Q6NSW7 305 aa12.1□□□□□ -0.47
PNKP-218ENST00000625299 ZNF730Q6ZMV8 503 aa12.1□□□□□ -0.47
PNKP-218ENST00000625299 GJC3Q8NFK1 279 aa12.1□□□□□ -0.47
PNKP-218ENST00000625299 SLCO4A1Q96BD0 722 aa12.1□□□□□ -0.47
PNKP-218ENST00000625299 ADAT1Q9BUB4 502 aaKnown RBP12.1□□□□□ -0.47
PNKP-218ENST00000625299 NDEL1Q9GZM8 345 aa12.1□□□□□ -0.47
PNKP-218ENST00000625299 HDHD2Q9H0R4 259 aa12.1□□□□□ -0.47
PNKP-218ENST00000625299 TOR3AQ9H497 397 aa12.1□□□□□ -0.47
PNKP-218ENST00000625299 ZNRD1Q9P1U0 126 aa12.1□□□□□ -0.47
PNKP-218ENST00000625299 CAB39Q9Y376 341 aaPredicted RBP12.1□□□□□ -0.47
PNKP-218ENST00000625299 TRAV38-1A0A0B4J264 116 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 A0A1B0GWJ7 208 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 F5H5K5 113 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 J3KTA2 159 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 CDC42EP2O14613 210 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 DVL1O14640 695 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 AHCYL1O43865 530 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 CA6P23280 308 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 GABRA5P31644 462 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 TGFBR2P37173 567 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 POU4F2Q12837 409 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 MALLQ13021 153 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 SLC35E4Q6ICL7 350 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 PGAP1Q75T13 922 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 FAM122BQ7Z309 247 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 LZICQ8WZA0 190 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 TLCD1Q96CP7 247 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 ZNF583Q96ND8 569 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 FNDC11Q9BVV2 318 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 NUAK2Q9H093 628 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 PPA2Q9H2U2 334 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 TRIM36Q9NQ86 728 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 SIRT7Q9NRC8 400 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 C1orf123Q9NWV4 160 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 SIGLEC9Q9Y336 463 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 LHFPL6Q9Y693 200 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 RYR3Q15413 4870 aa12.09□□□□□ -0.47
PNKP-218ENST00000625299 IGHV3OR15-7A0A075B7D8 119 aa12.08□□□□□ -0.48
PNKP-218ENST00000625299 A0A1B0GVI7 797 aa12.08□□□□□ -0.48
PNKP-218ENST00000625299 hCG_1807616A0A1W2PRN6 198 aa12.08□□□□□ -0.48
PNKP-218ENST00000625299 A6NLC8 198 aa12.08□□□□□ -0.48
PNKP-218ENST00000625299 SOCS2O14508 198 aa12.08□□□□□ -0.48
PNKP-218ENST00000625299 PAHP00439 452 aa12.08□□□□□ -0.48
PNKP-218ENST00000625299 LCATP04180 440 aa12.08□□□□□ -0.48
PNKP-218ENST00000625299 ZNF26P17031 533 aaPredicted RBP12.08□□□□□ -0.48
PNKP-218ENST00000625299 CYLC2Q14093 348 aaPredicted RBP12.08□□□□□ -0.48
PNKP-218ENST00000625299 TRAM2Q15035 370 aa12.08□□□□□ -0.48
PNKP-218ENST00000625299 ZBED5Q49AG3 693 aa12.08□□□□□ -0.48
PNKP-218ENST00000625299 CDONQ4KMG0 1287 aa12.08□□□□□ -0.48
PNKP-218ENST00000625299 TBPL2Q6SJ96 375 aa12.08□□□□□ -0.48
PNKP-218ENST00000625299 MRPL21Q7Z2W9 205 aaKnown RBP12.08□□□□□ -0.48
PNKP-218ENST00000625299 CALHM3Q86XJ0 350 aa12.08□□□□□ -0.48
PNKP-218ENST00000625299 LINC00346Q8IVM7 164 aa12.08□□□□□ -0.48
PNKP-218ENST00000625299 OFCC1Q8IZS5 231 aa12.08□□□□□ -0.48
PNKP-218ENST00000625299 FGFRL1Q8N441 504 aa12.08□□□□□ -0.48
PNKP-218ENST00000625299 GALNT4Q8N4A0 578 aa12.08□□□□□ -0.48
PNKP-218ENST00000625299 PITX2Q99697 317 aa12.08□□□□□ -0.48
PNKP-218ENST00000625299 SH3GL1Q99961 368 aa12.08□□□□□ -0.48
PNKP-218ENST00000625299 CNTD2Q9H8S5 307 aa12.08□□□□□ -0.48
PNKP-218ENST00000625299 NMNAT1Q9HAN9 279 aaPredicted RBP12.08□□□□□ -0.48
PNKP-218ENST00000625299 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.08□□□□□ -0.48
PNKP-218ENST00000625299 RPUSD1Q9UJJ7 312 aaKnown RBP12.08□□□□□ -0.48
PNKP-218ENST00000625299 FOXJ3Q9UPW0 622 aa12.08□□□□□ -0.48
PNKP-218ENST00000625299 SNX13Q9Y5W8 968 aa12.08□□□□□ -0.48
PNKP-218ENST00000625299 NDUFA2O43678 99 aa12.07□□□□□ -0.48
PNKP-218ENST00000625299 FCN3O75636 299 aa12.07□□□□□ -0.48
PNKP-218ENST00000625299 ECDO95905 644 aaPredicted RBP12.07□□□□□ -0.48
PNKP-218ENST00000625299 GRPP07492 148 aa12.07□□□□□ -0.48
PNKP-218ENST00000625299 ACSM4P0C7M7 580 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 248 ms