RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 SPHARQ15513 63 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 EFNB3Q15768 340 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 ZNF322Q6U7Q0 402 aaPredicted RBP10.92□□□□□ -0.66
PNKP-217ENST00000625216 ZNF813Q6ZN06 617 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 DPY19L4Q7Z388 723 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 MDP1Q86V88 176 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 GLB1L2Q8IW92 636 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 NABP1Q96AH0 204 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 YIPF6Q96EC8 236 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 FBXO17Q96EF6 278 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 COG8Q96MW5 612 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 AMELYQ99218 206 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 FOXB1Q99853 325 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 NAA50Q9GZZ1 169 aaKnown RBP10.92□□□□□ -0.66
PNKP-217ENST00000625216 ZNF442Q9H7R0 627 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 ISG20L2Q9H9L3 353 aaKnown RBP10.92□□□□□ -0.66
PNKP-217ENST00000625216 EMC7Q9NPA0 242 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 POLE4Q9NR33 117 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 CHCHD3Q9NX63 227 aaKnown RBP10.92□□□□□ -0.66
PNKP-217ENST00000625216 FBXL3Q9UKT7 428 aa10.92□□□□□ -0.66
PNKP-217ENST00000625216 CAB39Q9Y376 341 aaPredicted RBP10.92□□□□□ -0.66
PNKP-217ENST00000625216 IGHV2OR16-5A0A0B4J2B6 119 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 ZNF593O00488 134 aaPredicted RBP10.91□□□□□ -0.66
PNKP-217ENST00000625216 OR4A8P0C604 315 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 SLC25A16P16260 332 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 ALOX5APP20292 161 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 CALCRP30988 508 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 IDH3GP51553 393 aaPredicted RBP10.91□□□□□ -0.66
PNKP-217ENST00000625216 HGFACQ04756 655 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 ADIPOQQ15848 244 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 SSX1Q16384 188 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 KCNMB1Q16558 191 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 TSTQ16762 297 aaKnown RBP10.91□□□□□ -0.66
PNKP-217ENST00000625216 PCK2Q16822 640 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 GSG1Q2KHT4 349 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 CDONQ4KMG0 1287 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 TP53I3Q53FA7 332 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 ARMCX4Q5H9R4 360 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 LINC00346Q8IVM7 164 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 OTOSQ8NHW6 89 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 FAM168AQ92567 244 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 C4orf36Q96KX1 117 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 MGLLQ99685 303 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 PLK3Q9H4B4 646 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 SPEF1Q9Y4P9 236 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 CEPT1Q9Y6K0 416 aa10.91□□□□□ -0.66
PNKP-217ENST00000625216 FN1P02751 2386 aaKnown RBP10.91□□□□□ -0.66
PNKP-217ENST00000625216 IGHV4-30-2A0A087WSY4 118 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 SMIM31A0A1B0GVY4 71 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 H3BSA7 217 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 NDUFS8O00217 210 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 UBL3O95164 117 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 ABHD16AO95870 558 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 HLA-HP01893 362 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 HSMCR30P0CW71 290 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 OR8G3PP0DMU2 310 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 CD79AP11912 226 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 NPR2P20594 1047 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 PCSK6P29122 969 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 OR12D2P58182 307 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 RAB1AP62820 205 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 KRTAP1-1Q07627 177 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 LOXL1Q08397 574 aaPredicted RBP10.9□□□□□ -0.66
PNKP-217ENST00000625216 MLLT11Q13015 90 aaPredicted RBP10.9□□□□□ -0.66
PNKP-217ENST00000625216 EIF2B1Q14232 305 aaKnown RBP10.9□□□□□ -0.66
PNKP-217ENST00000625216 NRN1LQ496H8 165 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 TEX30Q5JUR7 227 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 ZNF684Q5T5D7 378 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 GPR107Q5VW38 600 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 DPPA2Q7Z7J5 298 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 KLBQ86Z14 1044 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 CLVS1Q8IUQ0 354 aaPredicted RBP10.9□□□□□ -0.66
PNKP-217ENST00000625216 SYS1Q8N2H4 156 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 ZFP41Q8N8Y5 198 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 GATAD2BQ8WXI9 593 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 MNTQ99583 582 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 SEC61A2Q9H9S3 476 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 MYOZ1Q9NP98 299 aaPredicted RBP10.9□□□□□ -0.66
PNKP-217ENST00000625216 ISYNA1Q9NPH2 558 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 MRM2Q9UI43 246 aaKnown RBP10.9□□□□□ -0.66
PNKP-217ENST00000625216 LAMP5Q9UJQ1 280 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 LHFPL6Q9Y693 200 aa10.9□□□□□ -0.66
PNKP-217ENST00000625216 ANK3Q12955 4377 aaKnown RBP10.9□□□□□ -0.66
PNKP-217ENST00000625216 ZNF503-AS2A6NEH8 195 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 INAFM1C9JVW0 142 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 E9PI62 339 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 J3QLW9 94 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 PSMD9O00233 223 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 CD5LO43866 347 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 FARS2O95363 451 aaKnown RBP10.89□□□□□ -0.67
PNKP-217ENST00000625216 MT-ND5P03915 603 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 CELA3BP08861 270 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 B4GALT1P15291 398 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 ZNF823P16415 610 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 ZNF19P17023 458 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 THBS4P35443 961 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 EVX1P49640 407 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 PPOXP50336 477 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 ZNF84P51523 738 aa10.89□□□□□ -0.67
PNKP-217ENST00000625216 ACTA2P62736 377 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms