RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 CD200P41217 278 aa9.99□□□□□ -0.81
UPF3B-204ENST00000619445 PITPNBP48739 271 aa9.99□□□□□ -0.81
UPF3B-204ENST00000619445 TSPAN31Q12999 210 aa9.99□□□□□ -0.81
UPF3B-204ENST00000619445 C11orf91Q3C1V1 193 aa9.99□□□□□ -0.81
UPF3B-204ENST00000619445 KRTAP27-1Q3LI81 207 aa9.99□□□□□ -0.81
UPF3B-204ENST00000619445 ZNF404Q494X3 552 aa9.99□□□□□ -0.81
UPF3B-204ENST00000619445 CD276Q5ZPR3 534 aa9.99□□□□□ -0.81
UPF3B-204ENST00000619445 SLC18B1Q6NT16 456 aa9.99□□□□□ -0.81
UPF3B-204ENST00000619445 DCDC5Q6ZRR9 648 aa9.99□□□□□ -0.81
UPF3B-204ENST00000619445 PGAP1Q75T13 922 aa9.99□□□□□ -0.81
UPF3B-204ENST00000619445 MOGAT3Q86VF5 341 aa9.99□□□□□ -0.81
UPF3B-204ENST00000619445 OR6V1Q8N148 313 aa9.99□□□□□ -0.81
UPF3B-204ENST00000619445 PARP8Q8N3A8 854 aa9.99□□□□□ -0.81
UPF3B-204ENST00000619445 SPERTQ8NA61 448 aa9.99□□□□□ -0.81
UPF3B-204ENST00000619445 GNPDA2Q8TDQ7 276 aa9.99□□□□□ -0.81
UPF3B-204ENST00000619445 SPRYD4Q8WW59 207 aaPredicted RBP9.99□□□□□ -0.81
UPF3B-204ENST00000619445 NSMCE2Q96MF7 247 aa9.99□□□□□ -0.81
UPF3B-204ENST00000619445 TSSK2Q96PF2 358 aa9.99□□□□□ -0.81
UPF3B-204ENST00000619445 NMNAT3Q96T66 252 aa9.99□□□□□ -0.81
UPF3B-204ENST00000619445 RPRD1BQ9NQG5 326 aaKnown RBP9.99□□□□□ -0.81
UPF3B-204ENST00000619445 CLN8Q9UBY8 286 aa9.99□□□□□ -0.81
UPF3B-204ENST00000619445 PKD1L1Q8TDX9 2849 aa9.99□□□□□ -0.81
UPF3B-204ENST00000619445 KIR2DS1A0A191URI9 304 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 DNAJC9-AS1A6NH13 148 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 F5H5K5 113 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 F5H5P2 479 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 DCTN6O00399 190 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 MLNRO43193 412 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 GMDSO60547 372 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 LIPFP07098 398 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 HIST1H1CP16403 213 aaKnown RBP9.98□□□□□ -0.81
UPF3B-204ENST00000619445 EGR1P18146 543 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 CD80P33681 288 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 GSSP48637 474 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 ERFP50548 548 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 SEC61A1P61619 476 aaKnown RBP9.98□□□□□ -0.81
UPF3B-204ENST00000619445 TRAP1Q12931 704 aaKnown RBP9.98□□□□□ -0.81
UPF3B-204ENST00000619445 GK2Q14410 553 aaPredicted RBP9.98□□□□□ -0.81
UPF3B-204ENST00000619445 MEP1BQ16820 701 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 KLF17Q5JT82 389 aaPredicted RBP9.98□□□□□ -0.81
UPF3B-204ENST00000619445 CORO6Q6QEF8 472 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 ZNF620Q6ZNG0 422 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 MRPL21Q7Z2W9 205 aaKnown RBP9.98□□□□□ -0.81
UPF3B-204ENST00000619445 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.98□□□□□ -0.81
UPF3B-204ENST00000619445 PGAM4Q8N0Y7 254 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 BHLHE23Q8NDY6 225 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 OR2T4Q8NH00 348 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 OR4K13Q8NH42 304 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 ZNF420Q8TAQ5 688 aaPredicted RBP9.98□□□□□ -0.81
UPF3B-204ENST00000619445 ELAC2Q9BQ52 826 aaKnown RBP9.98□□□□□ -0.81
UPF3B-204ENST00000619445 TMEM246Q9BRR3 403 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 ZNF696Q9H7X3 374 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 FN3KRPQ9HA64 309 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 IL1RAPQ9NPH3 570 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 ZNF446Q9NWS9 450 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 CD300AQ9UGN4 299 aa9.98□□□□□ -0.81
UPF3B-204ENST00000619445 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.97□□□□□ -0.81
UPF3B-204ENST00000619445 A0A1B0GUS0 222 aa9.97□□□□□ -0.81
UPF3B-204ENST00000619445 M0R135 149 aa9.97□□□□□ -0.81
UPF3B-204ENST00000619445 ATP8B1O43520 1251 aa9.97□□□□□ -0.81
UPF3B-204ENST00000619445 ENSAO43768 121 aaKnown RBP9.97□□□□□ -0.81
UPF3B-204ENST00000619445 DIRAS1O95057 198 aa9.97□□□□□ -0.81
UPF3B-204ENST00000619445 CYB5R3P00387 301 aaPredicted RBP9.97□□□□□ -0.81
UPF3B-204ENST00000619445 PLATP00750 562 aa9.97□□□□□ -0.81
UPF3B-204ENST00000619445 SEMG1P04279 462 aa9.97□□□□□ -0.81
UPF3B-204ENST00000619445 MNAT1P51948 309 aa9.97□□□□□ -0.81
UPF3B-204ENST00000619445 BLVRAP53004 296 aa9.97□□□□□ -0.81
UPF3B-204ENST00000619445 PAX2Q02962 417 aa9.97□□□□□ -0.81
UPF3B-204ENST00000619445 PRR31Q5SQ13 230 aa9.97□□□□□ -0.81
UPF3B-204ENST00000619445 DRAM2Q6UX65 266 aa9.97□□□□□ -0.81
UPF3B-204ENST00000619445 CFAP77Q6ZQR2 320 aa9.97□□□□□ -0.81
UPF3B-204ENST00000619445 ZNF799Q96GE5 643 aa9.97□□□□□ -0.81
UPF3B-204ENST00000619445 NUDT16L1Q9BRJ7 211 aaKnown RBP9.97□□□□□ -0.81
UPF3B-204ENST00000619445 SP140LQ9H930 580 aa9.97□□□□□ -0.81
UPF3B-204ENST00000619445 CDH10Q9Y6N8 788 aa9.97□□□□□ -0.81
UPF3B-204ENST00000619445 OR6C68A6NDL8 312 aa9.96□□□□□ -0.82
UPF3B-204ENST00000619445 PTBP3O95758 552 aaKnown RBP9.96□□□□□ -0.82
UPF3B-204ENST00000619445 RRM2P31350 389 aa9.96□□□□□ -0.82
UPF3B-204ENST00000619445 GGT2P36268 569 aa9.96□□□□□ -0.82
UPF3B-204ENST00000619445 DDOSTP39656 456 aa9.96□□□□□ -0.82
UPF3B-204ENST00000619445 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.96□□□□□ -0.82
UPF3B-204ENST00000619445 OR8G1Q15617 311 aa9.96□□□□□ -0.82
UPF3B-204ENST00000619445 RSPO1Q2MKA7 263 aaPredicted RBP9.96□□□□□ -0.82
UPF3B-204ENST00000619445 ZNF362Q5T0B9 420 aaPredicted RBP9.96□□□□□ -0.82
UPF3B-204ENST00000619445 GPR157Q5UAW9 335 aa9.96□□□□□ -0.82
UPF3B-204ENST00000619445 WDR25Q64LD2 544 aaPredicted RBP9.96□□□□□ -0.82
UPF3B-204ENST00000619445 C16orf89Q6UX73 402 aa9.96□□□□□ -0.82
UPF3B-204ENST00000619445 CPLX4Q7Z7G2 160 aa9.96□□□□□ -0.82
UPF3B-204ENST00000619445 LINC00346Q8IVM7 164 aa9.96□□□□□ -0.82
UPF3B-204ENST00000619445 RNF148Q8N7C7 305 aa9.96□□□□□ -0.82
UPF3B-204ENST00000619445 FAM86B1Q8N7N1 296 aa9.96□□□□□ -0.82
UPF3B-204ENST00000619445 PROKR2Q8NFJ6 384 aa9.96□□□□□ -0.82
UPF3B-204ENST00000619445 DACT3Q96B18 629 aaPredicted RBP9.96□□□□□ -0.82
UPF3B-204ENST00000619445 SLCO4A1Q96BD0 722 aa9.96□□□□□ -0.82
UPF3B-204ENST00000619445 TRIM15Q9C019 465 aa9.96□□□□□ -0.82
UPF3B-204ENST00000619445 SLITRK2Q9H156 845 aa9.96□□□□□ -0.82
UPF3B-204ENST00000619445 NOX4Q9NPH5 578 aa9.96□□□□□ -0.82
UPF3B-204ENST00000619445 MRPL15Q9P015 296 aaKnown RBP9.96□□□□□ -0.82
UPF3B-204ENST00000619445 ERVK-18Q9QC07 812 aa9.96□□□□□ -0.82
UPF3B-204ENST00000619445 RNF7Q9UBF6 113 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms