RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 CEACAM8P31997 349 aaPredicted RBP18.96■□□□□ 0.63
SGMS1-210ENST00000619438 ADAM8P78325 824 aa18.96■□□□□ 0.63
SGMS1-210ENST00000619438 ZNF239Q16600 458 aaKnown RBP18.96■□□□□ 0.63
SGMS1-210ENST00000619438 SLC36A2Q495M3 483 aa18.96■□□□□ 0.63
SGMS1-210ENST00000619438 PLA1AQ53H76 456 aa18.96■□□□□ 0.63
SGMS1-210ENST00000619438 WDR38Q5JTN6 314 aa18.96■□□□□ 0.63
SGMS1-210ENST00000619438 ATAD3CQ5T2N8 411 aa18.96■□□□□ 0.63
SGMS1-210ENST00000619438 C3orf33Q6P1S2 294 aa18.96■□□□□ 0.63
SGMS1-210ENST00000619438 P4HA3Q7Z4N8 544 aa18.96■□□□□ 0.63
SGMS1-210ENST00000619438 LIX1LQ8IVB5 337 aa18.96■□□□□ 0.63
SGMS1-210ENST00000619438 C7orf50Q9BRJ6 194 aaKnown RBP18.96■□□□□ 0.63
SGMS1-210ENST00000619438 COA3Q9Y2R0 106 aaPredicted RBP18.96■□□□□ 0.63
SGMS1-210ENST00000619438 C19orf84I3L1E1 186 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 AQP8O94778 261 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 COX6B1P14854 86 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 EIF1P41567 113 aaKnown RBP18.95■□□□□ 0.62
SGMS1-210ENST00000619438 MAGEB1P43366 347 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 ETFDHQ16134 617 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 CMTM4Q8IZR5 234 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 GTPBP8Q8N3Z3 284 aaPredicted RBP18.95■□□□□ 0.62
SGMS1-210ENST00000619438 ZNF433Q8N7K0 673 aaPredicted RBP18.95■□□□□ 0.62
SGMS1-210ENST00000619438 OR52N5Q8NH56 324 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 SLC25A43Q8WUT9 341 aaPredicted RBP18.95■□□□□ 0.62
SGMS1-210ENST00000619438 RAB40AQ8WXH6 277 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 ORAI1Q96D31 301 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 ABHD6Q9BV23 337 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 KLHL9Q9P2J3 617 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 ING1Q9UK53 422 aaPredicted RBP18.95■□□□□ 0.62
SGMS1-210ENST00000619438 CACNG2Q9Y698 323 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 LRBAP50851 2863 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 MBD3L4A6NDZ8 208 aaPredicted RBP18.95■□□□□ 0.62
SGMS1-210ENST00000619438 MBD3L3A6NE82 208 aaPredicted RBP18.95■□□□□ 0.62
SGMS1-210ENST00000619438 A6NIN4 97 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 MBD3L5A6NJ08 208 aaPredicted RBP18.95■□□□□ 0.62
SGMS1-210ENST00000619438 H0YC42 278 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 SULT1B1O43704 296 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 KHDRBS3O75525 346 aaKnown RBP18.95■□□□□ 0.62
SGMS1-210ENST00000619438 ZNF17P17021 662 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 ADRA2CP18825 462 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 MNDAP41218 407 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 RIDAP52758 137 aaKnown RBP18.95■□□□□ 0.62
SGMS1-210ENST00000619438 SUCLG1P53597 346 aaKnown RBP18.95■□□□□ 0.62
SGMS1-210ENST00000619438 TATDN3Q17R31 274 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 HES5Q5TA89 166 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 DEGS2Q6QHC5 323 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 PLXDC2Q6UX71 529 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 KRT77Q7Z794 578 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 KDM8Q8N371 416 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 NAXEQ8NCW5 288 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 MBD3L2Q8NHZ7 208 aaPredicted RBP18.95■□□□□ 0.62
SGMS1-210ENST00000619438 WNT2BQ93097 391 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 MARVELD3Q96A59 401 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 UPRTQ96BW1 309 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 SLC25A38Q96DW6 304 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 PLEKHA1Q9HB21 404 aa18.95■□□□□ 0.62
SGMS1-210ENST00000619438 ZNF629Q9UEG4 869 aaPredicted RBP18.95■□□□□ 0.62
SGMS1-210ENST00000619438 OPN1LWP04000 364 aa18.94■□□□□ 0.62
SGMS1-210ENST00000619438 AGFG1P52594 562 aaKnown RBP18.94■□□□□ 0.62
SGMS1-210ENST00000619438 POU3F1Q03052 451 aaPredicted RBP18.94■□□□□ 0.62
SGMS1-210ENST00000619438 MYBPHQ13203 477 aa18.94■□□□□ 0.62
SGMS1-210ENST00000619438 EIF2B1Q14232 305 aaKnown RBP18.94■□□□□ 0.62
SGMS1-210ENST00000619438 TBRG1Q3YBR2 411 aa18.94■□□□□ 0.62
SGMS1-210ENST00000619438 C9orf106Q8NAJ2 232 aa18.94■□□□□ 0.62
SGMS1-210ENST00000619438 SMIM4Q8WVI0 70 aa18.94■□□□□ 0.62
SGMS1-210ENST00000619438 LIN7BQ9HAP6 207 aa18.94■□□□□ 0.62
SGMS1-210ENST00000619438 CENPXA8MT69 81 aa18.93■□□□□ 0.62
SGMS1-210ENST00000619438 EIF1AYO14602 144 aaKnown RBP18.93■□□□□ 0.62
SGMS1-210ENST00000619438 TMIGD3P0DMS9 266 aaPredicted RBP18.93■□□□□ 0.62
SGMS1-210ENST00000619438 ZNF823P16415 610 aa18.93■□□□□ 0.62
SGMS1-210ENST00000619438 CTSSP25774 331 aa18.93■□□□□ 0.62
SGMS1-210ENST00000619438 SOX2P48431 317 aa18.93■□□□□ 0.62
SGMS1-210ENST00000619438 RAC1P63000 192 aa18.93■□□□□ 0.62
SGMS1-210ENST00000619438 ADGRE4PQ86SQ3 457 aa18.93■□□□□ 0.62
SGMS1-210ENST00000619438 CATSPERDQ86XM0 798 aa18.93■□□□□ 0.62
SGMS1-210ENST00000619438 DTX3Q8N9I9 347 aa18.93■□□□□ 0.62
SGMS1-210ENST00000619438 TMEM106AQ96A25 262 aa18.93■□□□□ 0.62
SGMS1-210ENST00000619438 INTS12Q96CB8 462 aaKnown RBP18.93■□□□□ 0.62
SGMS1-210ENST00000619438 NEK6Q9HC98 313 aa18.93■□□□□ 0.62
SGMS1-210ENST00000619438 ZNF275Q9NSD4 429 aaPredicted RBP18.93■□□□□ 0.62
SGMS1-210ENST00000619438 B3GAT1Q9P2W7 334 aa18.93■□□□□ 0.62
SGMS1-210ENST00000619438 OR5V1Q9UGF6 321 aa18.93■□□□□ 0.62
SGMS1-210ENST00000619438 NOTCH2Q04721 2471 aa18.92■□□□□ 0.62
SGMS1-210ENST00000619438 ARHGAP21Q5T5U3 1957 aa18.92■□□□□ 0.62
SGMS1-210ENST00000619438 SLC22A20A6NK97 555 aa18.92■□□□□ 0.62
SGMS1-210ENST00000619438 SRSF10O75494 262 aaKnown RBP18.92■□□□□ 0.62
SGMS1-210ENST00000619438 BTCP35070 178 aa18.92■□□□□ 0.62
SGMS1-210ENST00000619438 OPRM1P35372 400 aa18.92■□□□□ 0.62
SGMS1-210ENST00000619438 EIF1AXP47813 144 aaKnown RBP18.92■□□□□ 0.62
SGMS1-210ENST00000619438 CLDN15P56746 228 aa18.92■□□□□ 0.62
SGMS1-210ENST00000619438 MRPS10P82664 201 aaKnown RBP18.92■□□□□ 0.62
SGMS1-210ENST00000619438 DGCR2P98153 550 aa18.92■□□□□ 0.62
SGMS1-210ENST00000619438 DYRK1AQ13627 763 aa18.92■□□□□ 0.62
SGMS1-210ENST00000619438 TOMM5Q8N4H5 51 aa18.92■□□□□ 0.62
SGMS1-210ENST00000619438 OR10AC1Q8NH08 325 aa18.92■□□□□ 0.62
SGMS1-210ENST00000619438 C15orf40Q8WUR7 153 aa18.92■□□□□ 0.62
SGMS1-210ENST00000619438 LRRC46Q96FV0 321 aa18.92■□□□□ 0.62
SGMS1-210ENST00000619438 UCN2Q96RP3 112 aa18.92■□□□□ 0.62
SGMS1-210ENST00000619438 MRPL13Q9BYD1 178 aaKnown RBP18.92■□□□□ 0.62
SGMS1-210ENST00000619438 TMEM185BQ9H7F4 350 aa18.92■□□□□ 0.62
SGMS1-210ENST00000619438 POU2F3Q9UKI9 436 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms