RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 VEGFCP49767 419 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 RPL27P61353 136 aaKnown RBP3.7□□□□□ -1.82
SNCA-213ENST00000618500 RPL18Q07020 188 aaKnown RBP3.7□□□□□ -1.82
SNCA-213ENST00000618500 ECH1Q13011 328 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 MAB21L1Q13394 359 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 CNN3Q15417 329 aaKnown RBP3.7□□□□□ -1.82
SNCA-213ENST00000618500 CCDC92Q53HC0 331 aaPredicted RBP3.7□□□□□ -1.82
SNCA-213ENST00000618500 RPS26P11Q5JNZ5 115 aaPredicted RBP3.7□□□□□ -1.82
SNCA-213ENST00000618500 GCNT6Q5T4J0 391 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 STUMQ69YW2 141 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 UNQ9370/PRO34162Q6UXP9 181 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 ETV3LQ6ZN32 361 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 CCDC80Q76M96 950 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 PIGWQ7Z7B1 504 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 COMTD1Q86VU5 262 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 MIER2Q8N344 545 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 OR1F12Q8NHA8 337 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 R3HDM4Q96D70 268 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 OR52E6Q96RD3 313 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 ZNF347Q96SE7 839 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 PRSS27Q9BQR3 290 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 NUF2Q9BZD4 464 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 OR51B6Q9H340 312 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 TNFRSF19Q9NS68 423 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 AURKCQ9UQB9 309 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 STARD10Q9Y365 291 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 SF3B6Q9Y3B4 125 aaKnown RBP3.7□□□□□ -1.82
SNCA-213ENST00000618500 TRBV5-3A0A0A0MS03 114 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 ODF3BA8MYP8 253 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 A8MZ25 164 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 H3BUX3 64 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 SGCEO43556 437 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 SERPINB7O75635 380 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 BPGMP07738 259 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 IDO1P14902 403 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 ATF4P18848 351 aaPredicted RBP3.7□□□□□ -1.82
SNCA-213ENST00000618500 IL12AP29459 219 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 SLC9A3P48764 834 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 SNCBQ16143 134 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 COMMD1Q8N668 190 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 ZNF420Q8TAQ5 688 aaPredicted RBP3.7□□□□□ -1.82
SNCA-213ENST00000618500 TEX37Q96LM6 180 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 DDOQ99489 341 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 HCAR1Q9BXC0 346 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 NDEL1Q9GZM8 345 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 DCLRE1BQ9H816 532 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 SMURF1Q9HCE7 757 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 INPP5EQ9NRR6 644 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 ZFP57Q9NU63 452 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 C14orf119Q9NWQ9 140 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 VSX1Q9NZR4 365 aaPredicted RBP3.7□□□□□ -1.82
SNCA-213ENST00000618500 HYDINQ4G0P3 5121 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 TEX13CA0A0J9YWL9 993 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 KRTAP9-6A0A140TA67 174 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 TMEM238LA0A1B0GVL6 79 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 ELOVL7A1L3X0 281 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 ADAM20O43506 726 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 TPST2O60704 377 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 OR5F1O95221 314 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 MT-ND1P03886 318 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 FPR3P25089 353 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 VDAC2P45880 294 aaPredicted RBP3.69□□□□□ -1.82
SNCA-213ENST00000618500 RGS8P57771 180 aaPredicted RBP3.69□□□□□ -1.82
SNCA-213ENST00000618500 BLMHQ13867 455 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 NSUN5P1Q3KNT7 163 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 BEND6Q5SZJ8 279 aaPredicted RBP3.69□□□□□ -1.82
SNCA-213ENST00000618500 SLC36A1Q7Z2H8 476 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 HMGN2P46Q86SG4 172 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 LRRC18Q8N456 261 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 ATG16L2Q8NAA4 619 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 RASSF5Q8WWW0 418 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 MED30Q96HR3 178 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 RBP7Q96R05 134 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 GPX7Q96SL4 187 aaPredicted RBP3.69□□□□□ -1.82
SNCA-213ENST00000618500 SSX3Q99909 188 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 ZNF580Q9UK33 172 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 SLC13A4Q9UKG4 626 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 A0A1W2PPH5 198 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 MCIDASD6RGH6 385 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 SYNGR1O43759 233 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 OR10H3O60404 316 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 PAHP00439 452 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 C1QCP02747 245 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 SERPINE1P05121 402 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 ALDOCP09972 364 aaKnown RBP3.69□□□□□ -1.82
SNCA-213ENST00000618500 PF4V1P10720 104 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 GPX2P18283 190 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 CD247P20963 164 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 LAP3P28838 519 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 HTR5AP47898 357 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 ERFP50548 548 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 TNP2Q05952 138 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 ZNF621Q6ZSS3 439 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 RNF144BQ7Z419 303 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 EGFL6Q8IUX8 553 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 CYB561A3Q8NBI2 242 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 ICA1LQ8NDH6 482 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 SPSB4Q96A44 273 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 SGTBQ96EQ0 304 aa3.69□□□□□ -1.82
SNCA-213ENST00000618500 SEBOXQ9HB31 216 aaPredicted RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms