RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 ANKRD37Q7Z713 158 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 WDFY1Q8IWB7 410 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 SVBPQ8N300 66 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 RGP1Q92546 391 aaPredicted RBP12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 RASL12Q9NYN1 266 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 DKKL1Q9UK85 242 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 V9GY05 133 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 IGKV3D-11A0A0A0MRZ8 115 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 OR6C76A6NM76 312 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 OR2AT4A6NND4 320 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 TXNL1O43396 289 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 LMX1BO60663 402 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 ASAH2BP0C7U1 165 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 FOLR3P41439 243 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 RPS11P62280 158 aaKnown RBP eCLIP12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 POU4F2Q12837 409 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 EEF1A1P5Q5VTE0 462 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 PMS2CLQ68D20 193 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 GLB1L2Q8IW92 636 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 ZNF440Q8IYI8 595 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 OR1M1Q8NGA1 313 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 OR5L2Q8NGL0 311 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 OR6K3Q8NGY3 331 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 LAT2Q9GZY6 243 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 PTGES2Q9H7Z7 377 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 HIF3AQ9Y2N7 669 aa12.94□□□□□ -0.34
SHROOM1-208ENST00000617339 TRAV36DV7A0A075B6V5 113 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 TMEM265A0A087WTH1 108 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 IGKV1D-43A0A0B4J1Z2 117 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 A0A1B0GTQ1 180 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 CTDSPLO15194 276 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 ZFAND5O76080 213 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 TACSTD2P09758 323 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 CALCRP30988 508 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 BIDP55957 195 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 ZXDAP98168 799 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 APCDD1LQ8NCL9 501 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 RXFP4Q8TDU9 374 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 DNASE2BQ8WZ79 361 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 SERINC1Q9NRX5 453 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 VSTM2BA6NLU5 285 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 M0R296 226 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 PNPP00491 289 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 S100A6P06703 90 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 UBBP0CG47 229 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 UBCP0CG48 685 aaKnown RBP12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 DPP4P27487 766 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 RPS27AP62979 156 aaKnown RBP12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 UBA52P62987 128 aaKnown RBP12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 INSM1Q01101 510 aaPredicted RBP12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 CHAF1BQ13112 559 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 PLXDC2Q6UX71 529 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 ZNF600Q6ZNG1 722 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 ZNF627Q7L945 461 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 STEAP2Q8NFT2 490 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 NPRL2Q8WTW4 380 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 SLITRK2Q9H156 845 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 POFUT1Q9H488 388 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 PADI1Q9ULC6 663 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 PIEZO2Q9H5I5 2752 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 TRAV18A0A075B6X5 111 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 TMEM218A2RU14 115 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 ALG1L2C9J202 215 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 M0QYG6 137 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 TSPAN2O60636 221 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 AQP8O94778 261 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 IL5P05113 134 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 GP1BAP07359 652 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 ADCYAP1P18509 176 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 ZNF528Q3MIS6 628 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 SCGB2B2Q4G0G5 96 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 C17orf82Q86X59 251 aaPredicted RBP12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 CCDC36Q8IYA8 594 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 EIF4E3Q8N5X7 224 aaKnown RBP12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 ZNF285Q96NJ3 590 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 BCL2L14Q9BZR8 327 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 COMMD4Q9H0A8 199 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 FAM96BQ9Y3D0 163 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 ZNF407Q9C0G0 2248 aa12.93□□□□□ -0.34
SHROOM1-208ENST00000617339 LOC101059948A0A1B0GTJ6 334 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 FITM1A5D6W6 292 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 ZNF726A6NNF4 738 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 ARPC3O15145 178 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 CD3DP04234 171 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 DLSTP36957 453 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 PTGFRP43088 359 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 SLC6A9P48067 706 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 PLGLB1Q02325 96 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 ALKBH1Q13686 389 aaKnown RBP12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 AVPI1Q5T686 147 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 FAM122BQ7Z309 247 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 DCXRQ7Z4W1 244 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 TMEM234Q8WY98 164 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 MRPL48Q96GC5 212 aaKnown RBP12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 TLNRD1Q9H1K6 362 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 COMMD9Q9P000 198 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 FARSAQ9Y285 508 aaKnown RBP12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 NOP16Q9Y3C1 178 aaKnown RBP12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 TRAV14DV4A0A0A6YYC5 116 aa12.92□□□□□ -0.34
SHROOM1-208ENST00000617339 RAMP1O60894 148 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms