RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 LPCAT4Q643R3 524 aa4.82□□□□□ -1.64
CPNE3-208ENST00000614678 SFRP4Q6FHJ7 346 aaPredicted RBP4.82□□□□□ -1.64
CPNE3-208ENST00000614678 CD300LDQ6UXZ3 194 aa4.82□□□□□ -1.64
CPNE3-208ENST00000614678 PRSS45Q7RTY3 260 aa4.82□□□□□ -1.64
CPNE3-208ENST00000614678 WDR86Q86TI4 376 aa4.82□□□□□ -1.64
CPNE3-208ENST00000614678 BIVMQ86UB2 503 aa4.82□□□□□ -1.64
CPNE3-208ENST00000614678 C1orf159Q96HA4 380 aa4.82□□□□□ -1.64
CPNE3-208ENST00000614678 BDH2Q9BUT1 245 aa4.82□□□□□ -1.64
CPNE3-208ENST00000614678 KRCC1Q9NPI7 259 aaPredicted RBP4.82□□□□□ -1.64
CPNE3-208ENST00000614678 SLCO1C1Q9NYB5 712 aa4.82□□□□□ -1.64
CPNE3-208ENST00000614678 ERICH4A6NGS2 130 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 M0R135 149 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 TGFAP01135 160 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 USF1P22415 310 aaPredicted RBP4.81□□□□□ -1.64
CPNE3-208ENST00000614678 C6orf52Q5T4I8 152 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 COLCA1Q6ZS62 124 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 FAM57BQ71RH2 274 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 RNF144BQ7Z419 303 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 HDDC2Q7Z4H3 204 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 ZNF786Q8N393 782 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 CBR4Q8N4T8 237 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 GJC3Q8NFK1 279 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 OR5K1Q8NHB7 308 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 ZNF799Q96GE5 643 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 OR2V2Q96R30 315 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 MBOAT4Q96T53 435 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 NKX3-1Q99801 234 aaPredicted RBP4.81□□□□□ -1.64
CPNE3-208ENST00000614678 COPS4Q9BT78 406 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 RASSF4Q9H2L5 321 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 KRT84Q9NSB2 600 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 KIF17Q9P2E2 1029 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 WIPI2Q9Y4P8 454 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 PHF1O43189 567 aaPredicted RBP4.81□□□□□ -1.64
CPNE3-208ENST00000614678 FASP25445 335 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 SCRN3Q0VDG4 424 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 SMN1Q16637 294 aaKnown RBP4.81□□□□□ -1.64
CPNE3-208ENST00000614678 C11orf91Q3C1V1 193 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 ZNF718Q3SXZ3 478 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 CXXC5Q7LFL8 322 aaKnown RBP4.81□□□□□ -1.64
CPNE3-208ENST00000614678 IL17RDQ8NFM7 739 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 OR2T4Q8NH00 348 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 ELMOD3Q96FG2 381 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 SIGLEC11Q96RL6 698 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 TEAD3Q99594 435 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 RAB1BQ9H0U4 201 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 SAP30LQ9HAJ7 183 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 MMP26Q9NRE1 261 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 TANC2Q9HCD6 1990 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 PKD1L1Q8TDX9 2849 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 IGHV1-69-2A0A0G2JMI3 117 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 RIIAD1A6NNX1 92 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 PRR23D1E9PI22 279 aaPredicted RBP4.81□□□□□ -1.64
CPNE3-208ENST00000614678 TBX1O43435 398 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 PRR23D2P0DMB1 279 aaPredicted RBP4.81□□□□□ -1.64
CPNE3-208ENST00000614678 ZNF823P16415 610 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 GCH1P30793 250 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 FMO3P31513 532 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 ENTPD1P49961 510 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 ZNF121P58317 390 aaPredicted RBP4.81□□□□□ -1.64
CPNE3-208ENST00000614678 LMO4P61968 165 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 CSNK2BP67870 215 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 MBNL2Q5VZF2 373 aaKnown RBP4.81□□□□□ -1.64
CPNE3-208ENST00000614678 DEFB108BQ8NET1 73 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 SGK3Q96BR1 496 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 APOL4Q9BPW4 351 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 C1QTNF5Q9BXJ0 243 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 BCL2L14Q9BZR8 327 aa4.81□□□□□ -1.64
CPNE3-208ENST00000614678 EIF3KQ9UBQ5 218 aaKnown RBP4.81□□□□□ -1.64
CPNE3-208ENST00000614678 LOC390937A0A1W2PQ73 354 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 MEX3AA1L020 520 aaKnown RBP4.8□□□□□ -1.64
CPNE3-208ENST00000614678 HTR3EA5X5Y0 456 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 ZAR1LA6NP61 321 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 DEAF1O75398 565 aaPredicted RBP4.8□□□□□ -1.64
CPNE3-208ENST00000614678 INMTO95050 263 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 ZNF3P17036 446 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 PDLIM4P50479 330 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 PCK2Q16822 640 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 LYPD2Q6UXB3 125 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 RDH10Q8IZV5 341 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 OR2AJ1Q8NGZ0 328 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 RNF166Q96A37 237 aaPredicted RBP4.8□□□□□ -1.64
CPNE3-208ENST00000614678 HAVCR1Q96D42 359 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 CYYR1Q96J86 154 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 OSBPL10Q9BXB5 764 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 TBCCD1Q9NVR7 557 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 NKX1-2Q9UD57 310 aaPredicted RBP4.8□□□□□ -1.64
CPNE3-208ENST00000614678 EDARQ9UNE0 448 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 NBEAL1Q6ZS30 2694 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 ISPDA4D126 451 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 EBAG9O00559 213 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 GLCEO94923 617 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 BAG2O95816 211 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 ALPLP05186 524 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 GSTM3P21266 225 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 OTX1P32242 354 aaPredicted RBP4.8□□□□□ -1.64
CPNE3-208ENST00000614678 CX3CR1P49238 355 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 CXCR4P61073 352 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 PCBD1P61457 104 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 LCN2P80188 198 aa4.8□□□□□ -1.64
CPNE3-208ENST00000614678 ZMYND11Q15326 602 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms