RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 PNLIPRP3Q17RR3 467 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 ZNF100Q8IYN0 542 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 PIGCQ92535 297 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 GGACTQ9BVM4 153 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 VN1R3Q9BXE9 311 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 PBX4Q9BYU1 374 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 SMDT1Q9H4I9 107 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 CGGBP1Q9UFW8 167 aaPredicted RBP12.57□□□□□ -0.4
CHD1-212ENST00000614616 TMED3Q9Y3Q3 217 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 A0A1B0GTQ1 180 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 TNFRSF10CO14798 259 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 KLK3P07288 261 aaPredicted RBP12.57□□□□□ -0.4
CHD1-212ENST00000614616 SELENOPP49908 381 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 DHODHQ02127 395 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 CLEC12BQ2HXU8 276 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 TP53I13Q8NBR0 393 aaPredicted RBP12.57□□□□□ -0.4
CHD1-212ENST00000614616 ST8SIA5O15466 376 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 LIMS3P0CW19 117 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 LIMS4P0CW20 117 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 EPHA2P29317 976 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 ELAVL3Q14576 367 aaKnown RBP12.57□□□□□ -0.4
CHD1-212ENST00000614616 PLXNA1Q9UIW2 1896 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 ADAM11O75078 769 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 TFAP2EQ6VUC0 442 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 SMIM12Q96EX1 92 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 LIN7CQ9NUP9 197 aaKnown RBP12.57□□□□□ -0.4
CHD1-212ENST00000614616 SPATA6Q9NWH7 488 aaPredicted RBP12.57□□□□□ -0.4
CHD1-212ENST00000614616 TMEFF2Q9UIK5 374 aaPredicted RBP12.57□□□□□ -0.4
CHD1-212ENST00000614616 FITM1A5D6W6 292 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 BMPR1BO00238 502 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 FCN1O00602 326 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 DSCR3O14972 297 aa12.57□□□□□ -0.4
CHD1-212ENST00000614616 RNGTTO60942 597 aaKnown RBP12.57□□□□□ -0.4
CHD1-212ENST00000614616 ZNF385CQ66K41 422 aaPredicted RBP12.57□□□□□ -0.4
CHD1-212ENST00000614616 TOE1Q96GM8 510 aaKnown RBP12.57□□□□□ -0.4
CHD1-212ENST00000614616 ABLIM3O94929 683 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 IL2RGP31785 369 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 CDK5R1Q15078 307 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 ACKR1Q16570 336 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 MOB3CQ70IA8 216 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 SLC2A8Q9NY64 477 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 YIPF1Q9Y548 306 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 ERVH48-1M5A8F1 160 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 IRS1P35568 1242 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 NHLRC1Q6VVB1 395 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 OR2T10Q8NGZ9 312 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 PINX1Q96BK5 328 aaKnown RBP12.56□□□□□ -0.4
CHD1-212ENST00000614616 STARD4Q96DR4 205 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 CACFD1Q9UGQ2 172 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 MAP1LC3B2A6NCE7 125 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 FZD6O60353 706 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 SCAND1P57086 179 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 PPIAP62937 165 aaKnown RBP12.56□□□□□ -0.4
CHD1-212ENST00000614616 SLC38A9Q8NBW4 561 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 OR4N2Q8NGD1 307 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 MAP1LC3CQ9BXW4 147 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 MAP1LC3BQ9GZQ8 125 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 MANBALQ9NQG1 85 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 GSN-AS1Q9NRJ2 163 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 TRAPPC2LQ9UL33 140 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 H3BML4 177 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 USP2O75604 605 aaPredicted RBP12.56□□□□□ -0.4
CHD1-212ENST00000614616 IKZF1Q13422 519 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.56□□□□□ -0.4
CHD1-212ENST00000614616 DERL3Q96Q80 235 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 A0A1B0GV90 55 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 YIF1AO95070 293 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 ARL16Q0P5N6 197 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 PPP1R14DQ9NXH3 145 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 ZNF264O43296 627 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 CD82P27701 267 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 GNG10P50151 68 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 ANKRD34AQ69YU3 496 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 B4GALT7Q9UBV7 327 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 NAT8BQ9UHF3 227 aa12.56□□□□□ -0.4
CHD1-212ENST00000614616 XIRP1Q702N8 1843 aaKnown RBP12.56□□□□□ -0.4
CHD1-212ENST00000614616 P2RY10O00398 339 aa12.55□□□□□ -0.4
CHD1-212ENST00000614616 PLPP2O43688 288 aa12.55□□□□□ -0.4
CHD1-212ENST00000614616 LDB3O75112 727 aa12.55□□□□□ -0.4
CHD1-212ENST00000614616 NRASP01111 189 aa12.55□□□□□ -0.4
CHD1-212ENST00000614616 HRASP01112 189 aa12.55□□□□□ -0.4
CHD1-212ENST00000614616 KRASP01116 189 aa12.55□□□□□ -0.4
CHD1-212ENST00000614616 GSTP1P09211 210 aaKnown RBP12.55□□□□□ -0.4
CHD1-212ENST00000614616 PRLHRP49683 370 aa12.55□□□□□ -0.4
CHD1-212ENST00000614616 TMEM99Q8N816 258 aa12.55□□□□□ -0.4
CHD1-212ENST00000614616 KLRG1Q96E93 195 aa12.55□□□□□ -0.4
CHD1-212ENST00000614616 SLC35A4Q96G79 324 aa12.55□□□□□ -0.4
CHD1-212ENST00000614616 COL22A1Q8NFW1 1626 aaPredicted RBP12.55□□□□□ -0.4
CHD1-212ENST00000614616 FRMPD3Q5JV73 1810 aa12.55□□□□□ -0.4
CHD1-212ENST00000614616 SLC22A20A6NK97 555 aa12.55□□□□□ -0.4
CHD1-212ENST00000614616 GSTZ1O43708 216 aaPredicted RBP12.55□□□□□ -0.4
CHD1-212ENST00000614616 ERVFRD-1P60508 538 aa12.55□□□□□ -0.4
CHD1-212ENST00000614616 BTAF1O14981 1849 aa12.55□□□□□ -0.4
CHD1-212ENST00000614616 IGFBP1P08833 259 aaPredicted RBP12.55□□□□□ -0.4
CHD1-212ENST00000614616 TBXA2RP21731 343 aa12.55□□□□□ -0.4
CHD1-212ENST00000614616 SLC26A10Q8NG04 563 aa12.55□□□□□ -0.4
CHD1-212ENST00000614616 PLEKHB1Q9UF11 243 aaPredicted RBP12.55□□□□□ -0.4
CHD1-212ENST00000614616 ALPK2Q86TB3 2170 aa12.55□□□□□ -0.4
CHD1-212ENST00000614616 SERTM2A0A1B0GWG4 89 aa12.55□□□□□ -0.4
CHD1-212ENST00000614616 SPANXN5Q5MJ07 72 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms