RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 EPHA1P21709 976 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 FZD5Q13467 585 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 ZNF695Q8IW36 515 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 NAXDQ8IW45 347 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 TMEM185AQ8NFB2 350 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 ZNF501Q96CX3 271 aaPredicted RBP11.78□□□□□ -0.52
TCF3-220ENST00000611869 KCNK15Q9H427 330 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 FANCFQ9NPI8 374 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 TCF20Q9UGU0 1960 aaKnown RBP11.78□□□□□ -0.52
TCF3-220ENST00000611869 ARGFXA6NJG6 315 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 C4orf47A7E2U8 309 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 THY1P04216 161 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 FAHP16930 419 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 GALNSP34059 522 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 CEBPEQ15744 281 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 ACTBL2Q562R1 376 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 DUSP15Q9H1R2 295 aaPredicted RBP11.78□□□□□ -0.52
TCF3-220ENST00000611869 ZNF286AQ9HBT8 521 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 GLS2Q9UI32 602 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 MTCL1Q9Y4B5 1905 aaKnown RBP11.78□□□□□ -0.52
TCF3-220ENST00000611869 CCDC163A0A0D9SF12 145 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 KLRC4-KLRK1H3BQV0 150 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 NUPL2O15504 423 aaKnown RBP11.78□□□□□ -0.52
TCF3-220ENST00000611869 UBBP0CG47 229 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 S100A11P31949 105 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 MPLP40238 635 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 MGAT2Q10469 447 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 IKZF1Q13422 519 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 CMTM1Q8IZ96 169 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 OR4S1Q8NGB4 309 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 NUBPLQ8TB37 319 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 RRNAD1Q96FB5 475 aaKnown RBP11.78□□□□□ -0.52
TCF3-220ENST00000611869 DEFB127Q9H1M4 99 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 IGHV5-10-1A0A0J9YXX1 117 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 PCP4L1A6NKN8 68 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 HLA-DOBP13765 273 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 FAM109AQ8N4B1 249 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 CD300LFQ8TDQ1 290 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 APH1AQ96BI3 265 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 NTMQ9P121 344 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 WASF3Q9UPY6 502 aa11.78□□□□□ -0.52
TCF3-220ENST00000611869 APC2O95996 2303 aa11.77□□□□□ -0.52
TCF3-220ENST00000611869 DNAJC13O75165 2243 aa11.77□□□□□ -0.52
TCF3-220ENST00000611869 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.77□□□□□ -0.52
TCF3-220ENST00000611869 TMEM229AB2RXF0 380 aa11.77□□□□□ -0.52
TCF3-220ENST00000611869 PYCARD-AS1I3L0S3 204 aa11.77□□□□□ -0.52
TCF3-220ENST00000611869 RFX2P48378 723 aa11.77□□□□□ -0.52
TCF3-220ENST00000611869 RTL6Q6ICC9 239 aa11.77□□□□□ -0.52
TCF3-220ENST00000611869 PRSS42Q7Z5A4 293 aa11.77□□□□□ -0.52
TCF3-220ENST00000611869 C1orf210Q8IVY1 113 aa11.77□□□□□ -0.52
TCF3-220ENST00000611869 AKR7LQ8NHP1 331 aa11.77□□□□□ -0.52
TCF3-220ENST00000611869 APOBEC4Q8WW27 367 aaKnown RBP11.77□□□□□ -0.52
TCF3-220ENST00000611869 YIPF5Q969M3 257 aa11.77□□□□□ -0.52
TCF3-220ENST00000611869 NXF2Q9GZY0 626 aaKnown RBP11.77□□□□□ -0.52
TCF3-220ENST00000611869 P4HTMQ9NXG6 502 aa11.77□□□□□ -0.52
TCF3-220ENST00000611869 KCNIP1Q9NZI2 227 aa11.77□□□□□ -0.52
TCF3-220ENST00000611869 FOXJ3Q9UPW0 622 aa11.77□□□□□ -0.52
TCF3-220ENST00000611869 A0A1W2PQD3 144 aa11.77□□□□□ -0.53
TCF3-220ENST00000611869 C17orf51A8MQB3 221 aa11.77□□□□□ -0.53
TCF3-220ENST00000611869 DCTN6O00399 190 aa11.77□□□□□ -0.53
TCF3-220ENST00000611869 GLSO94925 669 aaPredicted RBP11.77□□□□□ -0.53
TCF3-220ENST00000611869 PPP3CBP16298 524 aa11.77□□□□□ -0.53
TCF3-220ENST00000611869 DSCR4P56555 118 aaPredicted RBP11.77□□□□□ -0.53
TCF3-220ENST00000611869 SHBQ15464 509 aa11.77□□□□□ -0.53
TCF3-220ENST00000611869 TAF9Q16594 264 aa11.77□□□□□ -0.53
TCF3-220ENST00000611869 OR51A4Q8NGJ6 313 aa11.77□□□□□ -0.53
TCF3-220ENST00000611869 OR5L1Q8NGL2 311 aa11.77□□□□□ -0.53
TCF3-220ENST00000611869 VRK1Q99986 396 aaPredicted RBP11.77□□□□□ -0.53
TCF3-220ENST00000611869 H3BUI4 141 aa11.77□□□□□ -0.53
TCF3-220ENST00000611869 TOX3O15405 576 aaPredicted RBP11.77□□□□□ -0.53
TCF3-220ENST00000611869 TNFSF15O95150 251 aa11.77□□□□□ -0.53
TCF3-220ENST00000611869 SERPINE2P07093 398 aa11.77□□□□□ -0.53
TCF3-220ENST00000611869 TIGD3Q6B0B8 471 aa11.77□□□□□ -0.53
TCF3-220ENST00000611869 DHRS13Q6UX07 377 aa11.77□□□□□ -0.53
TCF3-220ENST00000611869 PSMF1Q92530 271 aa11.77□□□□□ -0.53
TCF3-220ENST00000611869 MARVELD1Q9BSK0 173 aa11.77□□□□□ -0.53
TCF3-220ENST00000611869 OR14J1Q9UGF5 321 aa11.77□□□□□ -0.53
TCF3-220ENST00000611869 COL4A6Q14031 1691 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 A0A087WZY1 265 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 TK1P04183 234 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 OR8U9P0C7N5 309 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 RGS19P49795 217 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 CMBLQ96DG6 245 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 OBP2BQ9NPH6 170 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 A0A0B4J2A0 478 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 FAM221AA4D161 298 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 OR4C45A6NMZ5 311 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 FBXO24O75426 580 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 BPNT1O95861 308 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 CSF2RBP32927 897 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 HRH1P35367 487 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 OPRM1P35372 400 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 NANOS3P60323 173 aaKnown RBP11.76□□□□□ -0.53
TCF3-220ENST00000611869 CEACAM16Q2WEN9 425 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 COL13A1Q5TAT6 717 aaPredicted RBP11.76□□□□□ -0.53
TCF3-220ENST00000611869 PAQR8Q8TEZ7 354 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 SECTM1Q8WVN6 248 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 C17orf50Q8WW18 174 aa11.76□□□□□ -0.53
TCF3-220ENST00000611869 TINAGL1Q9GZM7 467 aaPredicted RBP11.76□□□□□ -0.53
TCF3-220ENST00000611869 EIF5A2Q9GZV4 153 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms