RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 ECH1Q13011 328 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 NSDHLQ15738 373 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 ZNF260Q3ZCT1 412 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 CDNFQ49AH0 187 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 VWA2Q5GFL6 755 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 LYG2Q86SG7 212 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 ZDHHC22Q8N966 263 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 OR4D6Q8NGJ1 314 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 OR1N1Q8NGS0 311 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 CMSS1Q9BQ75 279 aaKnown RBP13.09□□□□□ -0.31
CTCFL-219ENST00000608720 RAB33BQ9H082 229 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 PRO3102Q9H379 93 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 SEBOXQ9HB31 216 aaPredicted RBP13.09□□□□□ -0.31
CTCFL-219ENST00000608720 ZNF629Q9UEG4 869 aaPredicted RBP13.09□□□□□ -0.31
CTCFL-219ENST00000608720 VSIG4Q9Y279 399 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 SPTBP11277 2137 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 TMEM131Q92545 1883 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 CPED1A4D0V7 1026 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 FTCDNL1E5RQL4 147 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 H3BMH7 237 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 NME1P15531 152 aaKnown RBP13.09□□□□□ -0.31
CTCFL-219ENST00000608720 KCNJ3P48549 501 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 ARHGDIBP52566 201 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 TDGQ13569 410 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 SNTB1Q13884 538 aaKnown RBP13.09□□□□□ -0.31
CTCFL-219ENST00000608720 ACOT7LQ6ZUV0 252 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 OR2W3Q7Z3T1 314 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 FJX1Q86VR8 437 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.09□□□□□ -0.31
CTCFL-219ENST00000608720 ACBD4Q8NC06 268 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 THAP6Q8TBB0 222 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 ST7LQ8TDW4 575 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 FAM46BQ96A09 425 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 VRK1Q99986 396 aaPredicted RBP13.09□□□□□ -0.31
CTCFL-219ENST00000608720 DHCR7Q9UBM7 475 aaKnown RBP13.09□□□□□ -0.31
CTCFL-219ENST00000608720 RHBDD3Q9Y3P4 386 aa13.09□□□□□ -0.31
CTCFL-219ENST00000608720 MEX3AA1L020 520 aaKnown RBP13.08□□□□□ -0.32
CTCFL-219ENST00000608720 UBE2CO00762 179 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 IL2RAP01589 272 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 CSN2P05814 226 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 HLA-DOBP13765 273 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 HSD11B1P28845 292 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 BDKRB2P30411 391 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 DAP3P51398 398 aaKnown RBP13.08□□□□□ -0.32
CTCFL-219ENST00000608720 RAB5BP61020 215 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 NKPD1Q17RQ9 610 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 FAHD2BQ6P2I3 314 aaPredicted RBP13.08□□□□□ -0.32
CTCFL-219ENST00000608720 TRAPPC6BQ86SZ2 158 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 CD163Q86VB7 1156 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 C17orf82Q86X59 251 aaPredicted RBP13.08□□□□□ -0.32
CTCFL-219ENST00000608720 CBLN2Q8IUK8 224 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 ZNF441Q8N8Z8 693 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 OR4S1Q8NGB4 309 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 ASB10Q8WXI3 467 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 TMEM234Q8WY98 164 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 FAHD2AQ96GK7 314 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 SEC11CQ9BY50 192 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 CNTD2Q9H8S5 307 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 NPIPA5E9PKD4 350 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 MS4A18H0YCH9 400 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 RAB27BO00194 218 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 P2RY10O00398 339 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 EIF1AYO14602 144 aaKnown RBP13.08□□□□□ -0.32
CTCFL-219ENST00000608720 FGF16O43320 207 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 SCGNO76038 276 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 H2BFMP0C1H6 154 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 ADCYAP1P18509 176 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 EIF1AXP47813 144 aaKnown RBP13.08□□□□□ -0.32
CTCFL-219ENST00000608720 MMP16P51512 607 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 LUMP51884 338 aaPredicted RBP13.08□□□□□ -0.32
CTCFL-219ENST00000608720 MS4A18Q3C1V0 323 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 ZNF813Q6ZN06 617 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 MISPQ8IVT2 679 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 MITD1Q8WV92 249 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 PPP1R1CQ8WVI7 109 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 NKD1Q969G9 470 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 SLC2A4RGQ9NR83 387 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 MKL2Q9ULH7 1088 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 PCDHB10Q9UN67 800 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 NPIPA1Q9UND3 350 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 PLEKHA6Q9Y2H5 1048 aa13.08□□□□□ -0.32
CTCFL-219ENST00000608720 C9orf170A2RU37 121 aa13.07□□□□□ -0.32
CTCFL-219ENST00000608720 WRBO00258 174 aa13.07□□□□□ -0.32
CTCFL-219ENST00000608720 FBLP22087 321 aaKnown RBP13.07□□□□□ -0.32
CTCFL-219ENST00000608720 DLSTP36957 453 aa13.07□□□□□ -0.32
CTCFL-219ENST00000608720 ARL4DP49703 201 aa13.07□□□□□ -0.32
CTCFL-219ENST00000608720 EFNA3P52797 238 aa13.07□□□□□ -0.32
CTCFL-219ENST00000608720 FAM74A1Q5RGS3 127 aa13.07□□□□□ -0.32
CTCFL-219ENST00000608720 PRAMEF17Q5VTA0 474 aa13.07□□□□□ -0.32
CTCFL-219ENST00000608720 Q7L0L9 218 aa13.07□□□□□ -0.32
CTCFL-219ENST00000608720 LINC00346Q8IVM7 164 aa13.07□□□□□ -0.32
CTCFL-219ENST00000608720 KDM8Q8N371 416 aa13.07□□□□□ -0.32
CTCFL-219ENST00000608720 CHST4Q8NCG5 386 aa13.07□□□□□ -0.32
CTCFL-219ENST00000608720 RXFP4Q8TDU9 374 aa13.07□□□□□ -0.32
CTCFL-219ENST00000608720 RNF133Q8WVZ7 376 aa13.07□□□□□ -0.32
CTCFL-219ENST00000608720 FGGYQ96C11 551 aa13.07□□□□□ -0.32
CTCFL-219ENST00000608720 SEC22AQ96IW7 307 aa13.07□□□□□ -0.32
CTCFL-219ENST00000608720 PHB2Q99623 299 aa13.07□□□□□ -0.32
CTCFL-219ENST00000608720 EGLN1Q9GZT9 426 aa13.07□□□□□ -0.32
CTCFL-219ENST00000608720 WDR13Q9H1Z4 485 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms