RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 SCCPDHQ8NBX0 429 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 OR8J3Q8NGG0 315 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 OR10A6Q8NH74 314 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 MOSPD2Q8NHP6 518 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 PFN4Q8NHR9 129 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 LINC01006Q8NI28 216 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 TMEM255BQ8WV15 326 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 C10orf82Q8WW14 230 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 TAMM41Q96BW9 452 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 RHOVQ96L33 236 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 PRRC1Q96M27 445 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 WDFY2Q96P53 400 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 TECTBQ96PL2 329 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 WFDC6Q9BQY6 131 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 ANKRD19PQ9H560 264 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 C16orf95Q9H693 158 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 OPA3Q9H6K4 179 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 RAB18Q9NP72 206 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 FGFR1OP2Q9NVK5 253 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 DCAF16Q9NXF7 216 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 RNF7Q9UBF6 113 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 RRP15Q9Y3B9 282 aaKnown RBP5.24□□□□□ -1.57
CUX1-220ENST00000607092 KPTNQ9Y664 436 aa5.24□□□□□ -1.57
CUX1-220ENST00000607092 IGHV3OR16-10A0A075B7F0 116 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 IGKV1D-43A0A0B4J1Z2 117 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 IGHV1-69DA0A0B4J2H0 117 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 A0A1B0GVI7 797 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 ELOVL7A1L3X0 281 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 PRSS37A4D1T9 235 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 LGALS8O00214 317 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 FBP2O00757 339 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 PIP5K1CO60331 668 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 DCTN3O75935 186 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 CYB5R3P00387 301 aaPredicted RBP5.23□□□□□ -1.57
CUX1-220ENST00000607092 IGHV1-69P01742 117 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 IFNW1P05000 195 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 CD14P08571 375 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 GRK5P34947 590 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 CD200P41217 278 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 IER3P46695 156 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 PRKCDQ05655 676 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 MAPRE2Q15555 327 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 SNCBQ16143 134 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 KCNMB1Q16558 191 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 DHRS7BQ6IAN0 325 aaPredicted RBP5.23□□□□□ -1.57
CUX1-220ENST00000607092 OR2T2Q6IF00 324 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 RHOUQ7L0Q8 258 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 CYP4Z1Q86W10 505 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 LSRQ86X29 649 aaPredicted RBP5.23□□□□□ -1.57
CUX1-220ENST00000607092 OFCC1Q8IZS5 231 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 ZSCAN4Q8NAM6 433 aaPredicted RBP5.23□□□□□ -1.57
CUX1-220ENST00000607092 OR10AD1Q8NGE0 317 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 OR4D11Q8NGI4 311 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 OR51A7Q8NH64 312 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 SPRYD4Q8WW59 207 aaPredicted RBP5.23□□□□□ -1.57
CUX1-220ENST00000607092 ACOT11Q8WXI4 607 aaPredicted RBP5.23□□□□□ -1.57
CUX1-220ENST00000607092 ZNF570Q96NI8 536 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 FNDC11Q9BVV2 318 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 FAM234AQ9H0X4 552 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 RASSF4Q9H2L5 321 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 MMADHCQ9H3L0 296 aaPredicted RBP5.23□□□□□ -1.57
CUX1-220ENST00000607092 NMNAT1Q9HAN9 279 aaPredicted RBP5.23□□□□□ -1.57
CUX1-220ENST00000607092 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.23□□□□□ -1.57
CUX1-220ENST00000607092 C20orf141Q9NUB4 165 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 C14orf119Q9NWQ9 140 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 GID8Q9NWU2 228 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 PTTG3PQ9NZH4 202 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 VPREB3Q9UKI3 123 aa5.23□□□□□ -1.57
CUX1-220ENST00000607092 CENPVL3A0A0U1RRI6 287 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 ANKRD61A6NGH8 418 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 BBIP1A8MTZ0 92 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 F5H5P2 479 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 RNASEK-C17orf49H0YIS7 233 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 PIN1P1O15428 100 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 ADAM20O43506 726 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 XPNPEP2O43895 674 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 SLC16A7O60669 478 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 TSPAN9O75954 239 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 NDUFB2O95178 105 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 PTBP3O95758 552 aaKnown RBP5.22□□□□□ -1.57
CUX1-220ENST00000607092 PAHP00439 452 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 FUT4P22083 530 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 PAICSP22234 425 aaKnown RBP5.22□□□□□ -1.57
CUX1-220ENST00000607092 SDHAP31040 664 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 KDELR2P33947 212 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 DDOSTP39656 456 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 RASSF2P50749 326 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 RPS6KA3P51812 740 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 TPTEP56180 551 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 SELENOWP63302 87 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 BNIP1Q12981 228 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 OR8G1Q15617 311 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 ZBED5Q49AG3 693 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 CDONQ4KMG0 1287 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 CYBRD1Q53TN4 286 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 SPRNQ5BIV9 151 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 TMEM255AQ5JRV8 349 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 METAP1DQ6UB28 335 aaPredicted RBP5.22□□□□□ -1.57
CUX1-220ENST00000607092 ZNF730Q6ZMV8 503 aa5.22□□□□□ -1.57
CUX1-220ENST00000607092 ZNF841Q6ZN19 808 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms