RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 OR13C9Q8NGT0 318 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 OR4K15Q8NH41 348 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 CHST5Q9GZS9 411 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 PRDM13Q9H4Q3 707 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 SDHAF3Q9NRP4 125 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 GFOD1Q9NXC2 390 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 GAR1Q9NY12 217 aaKnown RBP11.12□□□□□ -0.63
CDCA3-212ENST00000604599 MMP24Q9Y5R2 645 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 FLVCR1Q9Y5Y0 555 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 POMT1Q9Y6A1 747 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 K7EQS6 105 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 SMIM10L1P0DMW3 83 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 UNC119Q13432 240 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 ZNF239Q16600 458 aaKnown RBP11.12□□□□□ -0.63
CDCA3-212ENST00000604599 TMEM268Q5VZI3 342 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 STX12Q86Y82 276 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 ST7LQ8TDW4 575 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 CTHRC1Q96CG8 243 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 MALSU1Q96EH3 234 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 SMIM10Q96HG1 83 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 LRRC3BQ96PB8 259 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 TGIF2Q9GZN2 237 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 RAB18Q9NP72 206 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 FBXL17Q9UF56 701 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 MED19A0JLT2 244 aaPredicted RBP11.12□□□□□ -0.63
CDCA3-212ENST00000604599 SFT2D2O95562 160 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 EML2O95834 649 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 ATXN8OSP0DMR3 200 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 HKR1P10072 659 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 LYL1P12980 280 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 GDI1P31150 447 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 CDX1P47902 265 aaPredicted RBP11.12□□□□□ -0.63
CDCA3-212ENST00000604599 FHITP49789 147 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 FDX2Q6P4F2 183 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 POMZP3Q6PJE2 187 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 CLEC9AQ6UXN8 241 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 TMEM104Q8NE00 496 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 OR9K2Q8NGE7 335 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 OR10D4PQ8NGN7 298 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 OR1J1Q8NGS3 322 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 MAFIPQ8WZ33 124 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 ATG2BQ96BY7 2078 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 KTI12Q96EK9 354 aaPredicted RBP11.12□□□□□ -0.63
CDCA3-212ENST00000604599 CNTD2Q9H8S5 307 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 RNF186Q9NXI6 227 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 PILRAQ9UKJ1 303 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 STARD10Q9Y365 291 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 EMC9Q9Y3B6 208 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 FBXO7Q9Y3I1 522 aa11.12□□□□□ -0.63
CDCA3-212ENST00000604599 SERINC4A6NH21 518 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 CYR61O00622 381 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 ZNF354AO60765 605 aaPredicted RBP11.11□□□□□ -0.63
CDCA3-212ENST00000604599 OR6A2O95222 327 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 OR13C7P0DN81 318 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 SNCAP37840 140 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 CLDN6P56747 220 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 SUPT4H1P63272 117 aaKnown RBP11.11□□□□□ -0.63
CDCA3-212ENST00000604599 TEX30Q5JUR7 227 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 PTCRAQ6ISU1 281 aaPredicted RBP11.11□□□□□ -0.63
CDCA3-212ENST00000604599 NPSR1Q6W5P4 371 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 ANGPTL5Q86XS5 388 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 TERB2Q8NHR7 220 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 CREBZFQ9NS37 354 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 GDE1Q9NZC3 331 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 DOK5Q9P104 306 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 LRP12Q9Y561 859 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 SPACA6W5XKT8 324 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 LOC107986453A0A1B0GWG9 222 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 NUDT21O43809 227 aaKnown RBP11.11□□□□□ -0.63
CDCA3-212ENST00000604599 OR2C1O95371 312 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 CST4P01036 141 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 ASAH2BP0C7U1 165 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 PET100P0DJ07 73 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 FSTP19883 344 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 ACTR1BP42025 376 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 RPS23P62266 143 aaKnown RBP11.11□□□□□ -0.63
CDCA3-212ENST00000604599 EGR4Q05215 589 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 CCDC54Q8NEL0 328 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 OR10G6Q8NH81 332 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 TGM7Q96PF1 710 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 SLC26A1Q9H2B4 701 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 PRO1933Q9H354 126 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 STARD5Q9NSY2 213 aa11.11□□□□□ -0.63
CDCA3-212ENST00000604599 HSPB2A8KAH6 182 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 LILRB3O75022 631 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 C1QL1O75973 258 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 S1PR1P21453 382 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 ZNF10P21506 573 aaPredicted RBP11.1□□□□□ -0.63
CDCA3-212ENST00000604599 ZNF141Q15928 474 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 HSPB2Q16082 182 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 SLC18B1Q6NT16 456 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 CBLN3Q6UW01 205 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 TAF8Q7Z7C8 310 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 POC1AQ8NBT0 407 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 WFIKKN2Q8TEU8 576 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 TM4SF19Q96DZ7 209 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 C2orf50Q96LR7 162 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 KLHDC3Q9BQ90 382 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 TIMM29Q9BSF4 260 aa11.1□□□□□ -0.63
CDCA3-212ENST00000604599 NICN1Q9BSH3 213 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms