RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 ERFP50548 548 aa9.8□□□□□ -0.84
CCDC12-209ENST00000604164 RAD23AP54725 363 aa9.8□□□□□ -0.84
CCDC12-209ENST00000604164 DVL1P1P54792 670 aaPredicted RBP9.8□□□□□ -0.84
CCDC12-209ENST00000604164 CCNIQ14094 377 aa9.8□□□□□ -0.84
CCDC12-209ENST00000604164 EIF2B1Q14232 305 aaKnown RBP9.8□□□□□ -0.84
CCDC12-209ENST00000604164 HLXQ14774 488 aaPredicted RBP9.8□□□□□ -0.84
CCDC12-209ENST00000604164 RSPO1Q2MKA7 263 aaPredicted RBP9.8□□□□□ -0.84
CCDC12-209ENST00000604164 TMEM255AQ5JRV8 349 aa9.8□□□□□ -0.84
CCDC12-209ENST00000604164 OR2T2Q6IF00 324 aa9.8□□□□□ -0.84
CCDC12-209ENST00000604164 FAHD1Q6P587 224 aa9.8□□□□□ -0.84
CCDC12-209ENST00000604164 ERI1Q8IV48 349 aaKnown RBP9.8□□□□□ -0.84
CCDC12-209ENST00000604164 HS3ST5Q8IZT8 346 aa9.8□□□□□ -0.84
CCDC12-209ENST00000604164 TEX29Q8N6K0 151 aa9.8□□□□□ -0.84
CCDC12-209ENST00000604164 ZNF454Q8N9F8 522 aa9.8□□□□□ -0.84
CCDC12-209ENST00000604164 OR6N2Q8NGY6 317 aa9.8□□□□□ -0.84
CCDC12-209ENST00000604164 OR51F2Q8NH61 342 aa9.8□□□□□ -0.84
CCDC12-209ENST00000604164 SPRYD4Q8WW59 207 aaPredicted RBP9.8□□□□□ -0.84
CCDC12-209ENST00000604164 SLAMF6Q96DU3 332 aa9.8□□□□□ -0.84
CCDC12-209ENST00000604164 OSBPL10Q9BXB5 764 aa9.8□□□□□ -0.84
CCDC12-209ENST00000604164 OR51V1Q9H2C8 321 aa9.8□□□□□ -0.84
CCDC12-209ENST00000604164 POFUT1Q9H488 388 aa9.8□□□□□ -0.84
CCDC12-209ENST00000604164 MARCH7Q9H992 704 aa9.8□□□□□ -0.84
CCDC12-209ENST00000604164 NTN4Q9HB63 628 aa9.8□□□□□ -0.84
CCDC12-209ENST00000604164 KRT84Q9NSB2 600 aa9.8□□□□□ -0.84
CCDC12-209ENST00000604164 CENPMQ9NSP4 180 aa9.8□□□□□ -0.84
CCDC12-209ENST00000604164 PPP1R3CQ9UQK1 317 aa9.8□□□□□ -0.84
CCDC12-209ENST00000604164 RTTNQ86VV8 2226 aa9.8□□□□□ -0.84
CCDC12-209ENST00000604164 CHD3Q12873 2000 aaKnown RBP9.79□□□□□ -0.84
CCDC12-209ENST00000604164 FAM183AA6NL82 134 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 LRRC30A6NM36 301 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 XRCC2O43543 280 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 MSMBP08118 114 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 CLUP10909 449 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 SRD5A1P18405 259 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 CFL1P23528 166 aaKnown RBP9.79□□□□□ -0.84
CCDC12-209ENST00000604164 CRISP1P54107 249 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 RPS7P62081 194 aaKnown RBP9.79□□□□□ -0.84
CCDC12-209ENST00000604164 MVKQ03426 396 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 MZT1Q08AG7 82 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 SCGB2A2Q13296 93 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 GK2Q14410 553 aaPredicted RBP9.79□□□□□ -0.84
CCDC12-209ENST00000604164 SNCBQ16143 134 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 SNAPC1Q16533 368 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 KLHL12Q53G59 568 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 LINC01590Q5TEZ4 76 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 LCN1P1Q5VSP4 162 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 ACSM5Q6NUN0 579 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 PLBD1Q6P4A8 553 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.79□□□□□ -0.84
CCDC12-209ENST00000604164 OR5AS1Q8N127 324 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 ZNF283Q8N7M2 679 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 CELF2-AS1Q8N7Q2 184 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 OR2V2Q96R30 315 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 GAL3ST1Q99999 423 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 SLC30A2Q9BRI3 323 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 NARFLQ9H6Q4 476 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 ZNF665Q9H7R5 613 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 TMEM106BQ9NUM4 274 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 WIPI2Q9Y4P8 454 aa9.79□□□□□ -0.84
CCDC12-209ENST00000604164 FN1P02751 2386 aaKnown RBP9.79□□□□□ -0.84
CCDC12-209ENST00000604164 NSD1Q96L73 2696 aaPredicted RBP9.79□□□□□ -0.84
CCDC12-209ENST00000604164 NIPBLQ6KC79 2804 aaeCLIP9.78□□□□□ -0.84
CCDC12-209ENST00000604164 TLN2Q9Y4G6 2542 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 TRAV20A0A0B4J274 112 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 ISPDA4D126 451 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 GGT3PA6NGU5 568 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 EBAG9O00559 213 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 CPT2P23786 658 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 IGFBP5P24593 272 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 IL2RGP31785 369 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 THBS2P35442 1172 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 DDOSTP39656 456 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 RPS27P42677 84 aaKnown RBP9.78□□□□□ -0.84
CCDC12-209ENST00000604164 FAM120AOSQ5T036 256 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 AVPI1Q5T686 147 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 ZFP1Q6P2D0 407 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 LYPD4Q6UWN0 246 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 Q6ZR03 302 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 ASRGL1Q7L266 308 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 CXXC5Q7LFL8 322 aaKnown RBP9.78□□□□□ -0.84
CCDC12-209ENST00000604164 DPY19L4Q7Z388 723 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 KLBQ86Z14 1044 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 CPOQ8IVL8 374 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 C1orf87Q8N0U7 546 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 KLHL36Q8N4N3 616 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 SPICQ8N5J4 248 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 OR52H1Q8NGJ2 320 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 OR10S1Q8NGN2 331 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 ST7LQ8TDW4 575 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 RNF133Q8WVZ7 376 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 ITLN1Q8WWA0 313 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 ZNRF4Q8WWF5 429 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 ERGIC1Q969X5 290 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 TMEM186Q96B77 213 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 CENPNQ96H22 339 aaPredicted RBP9.78□□□□□ -0.84
CCDC12-209ENST00000604164 NIPAL2Q9H841 368 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 MED20Q9H944 212 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 TVP23BQ9NYZ1 205 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 TREM2Q9NZC2 230 aa9.78□□□□□ -0.84
CCDC12-209ENST00000604164 H2AFY2Q9P0M6 372 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms