RNA–Protein interactions for RNA: ENST00000602222.5

SMG9-213, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-213ENST00000602222 SPIBQ01892 262 aa12.67□□□□□ -0.38
SMG9-213ENST00000602222 GK2Q14410 553 aaPredicted RBP12.67□□□□□ -0.38
SMG9-213ENST00000602222 ZNF404Q494X3 552 aa12.67□□□□□ -0.38
SMG9-213ENST00000602222 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.67□□□□□ -0.38
SMG9-213ENST00000602222 MOGAT3Q86VF5 341 aa12.67□□□□□ -0.38
SMG9-213ENST00000602222 OR52E2Q8NGJ4 325 aa12.67□□□□□ -0.38
SMG9-213ENST00000602222 RAB40AQ8WXH6 277 aa12.67□□□□□ -0.38
SMG9-213ENST00000602222 UPRTQ96BW1 309 aa12.67□□□□□ -0.38
SMG9-213ENST00000602222 NEIL1Q96FI4 390 aaPredicted RBP12.67□□□□□ -0.38
SMG9-213ENST00000602222 PLEKHA8Q96JA3 519 aa12.67□□□□□ -0.38
SMG9-213ENST00000602222 ZNF48Q96MX3 618 aaPredicted RBP12.67□□□□□ -0.38
SMG9-213ENST00000602222 PITX2Q99697 317 aa12.67□□□□□ -0.38
SMG9-213ENST00000602222 ATF6BQ99941 703 aa12.67□□□□□ -0.38
SMG9-213ENST00000602222 IFT27Q9BW83 186 aa12.67□□□□□ -0.38
SMG9-213ENST00000602222 CDADC1Q9BWV3 514 aa12.67□□□□□ -0.38
SMG9-213ENST00000602222 IL1RAPQ9NPH3 570 aa12.67□□□□□ -0.38
SMG9-213ENST00000602222 RPRD1BQ9NQG5 326 aaKnown RBP12.67□□□□□ -0.38
SMG9-213ENST00000602222 DOCK11Q5JSL3 2073 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 KIR2DS1A0A191URI9 304 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 DNAJC9-AS1A6NH13 148 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 F5H5K5 113 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 OR10H3O60404 316 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 ZNF205O95201 554 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 RNASE1P07998 156 aaKnown RBP12.66□□□□□ -0.38
SMG9-213ENST00000602222 NOS3P29474 1203 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 CD200P41217 278 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 HMGA2P52926 109 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 RAD23AP54725 363 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 GNB2P62879 340 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 TRAP1Q12931 704 aaKnown RBP12.66□□□□□ -0.38
SMG9-213ENST00000602222 TSPAN31Q12999 210 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 MALLQ13021 153 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 MAB21L1Q13394 359 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 BTNL3Q6UXE8 466 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 ZNF620Q6ZNG0 422 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 LINC00346Q8IVM7 164 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 BHLHE23Q8NDY6 225 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 OR2AJ1Q8NGZ0 328 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 GNPDA2Q8TDQ7 276 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 MCUR1Q96AQ8 359 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 DDOQ99489 341 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 MS4A7Q9GZW8 240 aaPredicted RBP12.66□□□□□ -0.38
SMG9-213ENST00000602222 WDR76Q9H967 626 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 MRPL22Q9NWU5 206 aaKnown RBP12.66□□□□□ -0.38
SMG9-213ENST00000602222 PKD1L1Q8TDX9 2849 aa12.66□□□□□ -0.38
SMG9-213ENST00000602222 PTBP3O95758 552 aaKnown RBP12.65□□□□□ -0.38
SMG9-213ENST00000602222 PLATP00750 562 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 HLA-DPB1P04440 258 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 RRM2P31350 389 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 MTNR1AP48039 350 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 TPTEP56180 551 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 DBPQ10586 325 aaPredicted RBP12.65□□□□□ -0.38
SMG9-213ENST00000602222 BAMBIQ13145 260 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 SPATS1Q496A3 300 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 SAMD4BQ5PRF9 694 aaKnown RBP12.65□□□□□ -0.38
SMG9-213ENST00000602222 PGBD2Q6P3X8 592 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 SHISA2Q6UWI4 295 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 NLRC3Q7RTR2 1065 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 NAA40Q86UY6 237 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 PGAM4Q8N0Y7 254 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 PARP8Q8N3A8 854 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 CCDC197Q8NCU1 140 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 OR8B3Q8NGG8 313 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 SLCO4A1Q96BD0 722 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 MAP6Q96JE9 813 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 NSMCE2Q96MF7 247 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 OR8B2Q96RD0 313 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 SLC22A4Q9H015 551 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 TMCC3Q9ULS5 477 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 PCDHGB1Q9Y5G3 927 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 V9GYQ6 96 aa12.65□□□□□ -0.38
SMG9-213ENST00000602222 PHYHO14832 338 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 ARPC2O15144 300 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 KRT36O76013 467 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 LCATP04180 440 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 FABP3P05413 133 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 IGHV4-38-2P0DP08 117 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 OTX1P32242 354 aaPredicted RBP12.64□□□□□ -0.39
SMG9-213ENST00000602222 PSMB10P40306 273 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 PITPNBP48739 271 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.64□□□□□ -0.39
SMG9-213ENST00000602222 ZSCAN26Q16670 478 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 CLEC12AQ5QGZ9 265 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 PRR31Q5SQ13 230 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 FAM201AQ5SY85 155 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 ZNF362Q5T0B9 420 aaPredicted RBP12.64□□□□□ -0.39
SMG9-213ENST00000602222 ZNF841Q6ZN19 808 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 DCDC5Q6ZRR9 648 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 PGAP1Q75T13 922 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 PLPP7Q8NBV4 271 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 SDR9C7Q8NEX9 313 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 OR10S1Q8NGN2 331 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 OR11L1Q8NGX0 322 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 SLC25A28Q96A46 364 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 PRDM13Q9H4Q3 707 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 CLN8Q9UBY8 286 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 NOP16Q9Y3C1 178 aaKnown RBP12.64□□□□□ -0.39
SMG9-213ENST00000602222 TRRAPQ9Y4A5 3859 aa12.64□□□□□ -0.39
SMG9-213ENST00000602222 IGHV3-64DA0A0J9YX35 117 aa12.63□□□□□ -0.39
SMG9-213ENST00000602222 CD300LBA8K4G0 201 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms