RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 E9PLN8 166 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 LINC01387J3KSC0 135 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 CYTIPO60759 359 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 GLSO94925 669 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 ITGB2P05107 769 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 EIF2B2P49770 351 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 MEOX1P50221 254 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 PLA1AQ53H76 456 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 GLYATL3Q5SZD4 288 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 HACD4Q5VWC8 232 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 GLT8D1Q68CQ7 371 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 NAA40Q86UY6 237 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 TOMM5Q8N4H5 51 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 OR52I2Q8NH67 350 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 ZCCHC14Q8WYQ9 949 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 FBXO17Q96EF6 278 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 MOB1AQ9H8S9 216 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 CRLF2Q9HC73 371 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 CHD8Q9HCK8 2581 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 URB1O60287 2271 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 ORC5O43913 435 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 ZNF84P51523 738 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 HIST1H3AP68431 136 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 MRPS34P82930 218 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 PLGLB1Q02325 96 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 RSPO1Q2MKA7 263 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 HIST2H3PS2Q5TEC6 136 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 HIST2H3AQ71DI3 136 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 FAM57BQ71RH2 274 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 LYPD6Q86Y78 171 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 SPACA3Q8IXA5 215 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 ZNF283Q8N7M2 679 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 GJC3Q8NFK1 279 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 SLC7A6Q92536 515 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 ITPKCQ96DU7 683 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 ALKBH3Q96Q83 286 aaPredicted RBP14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 NPAP1Q9NZP6 1156 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 RTTNQ86VV8 2226 aa14.99□□□□□ -0.01
SHKBP1-216ENST00000598201 LOC100289279A0A1B0GTE1 492 aa14.98□□□□□ -0.01
SHKBP1-216ENST00000598201 TMEM272A0A1B0GTI8 110 aa14.98□□□□□ -0.01
SHKBP1-216ENST00000598201 TMEM8BA6NDV4 472 aa14.98□□□□□ -0.01
SHKBP1-216ENST00000598201 WT1P19544 449 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-216ENST00000598201 HTR2CP28335 458 aa14.98□□□□□ -0.01
SHKBP1-216ENST00000598201 GDNFP39905 211 aa14.98□□□□□ -0.01
SHKBP1-216ENST00000598201 TAS2R20P59543 309 aa14.98□□□□□ -0.01
SHKBP1-216ENST00000598201 GRB2P62993 217 aaKnown RBP14.98□□□□□ -0.01
SHKBP1-216ENST00000598201 KLF9Q13886 244 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-216ENST00000598201 MARVELD1Q9BSK0 173 aa14.98□□□□□ -0.01
SHKBP1-216ENST00000598201 GPR84Q9NQS5 396 aa14.98□□□□□ -0.01
SHKBP1-216ENST00000598201 RABL2AQ9UBK7 228 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-216ENST00000598201 RABL2BQ9UNT1 228 aa14.98□□□□□ -0.01
SHKBP1-216ENST00000598201 SSUH2Q9Y2M2 353 aa14.98□□□□□ -0.01
SHKBP1-216ENST00000598201 KLF13Q9Y2Y9 288 aaPredicted RBP14.98□□□□□ -0.01
SHKBP1-216ENST00000598201 RHBDD3Q9Y3P4 386 aa14.98□□□□□ -0.01
SHKBP1-216ENST00000598201 IGF2RP11717 2491 aa14.98□□□□□ -0.01
SHKBP1-216ENST00000598201 A0A1B0GVI7 797 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 CTAG2O75638 210 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 ZNF708P17019 499 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 CTSSP25774 331 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 GNALP38405 381 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 PDSS1Q5T2R2 415 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 FAM27BQ5VT28 67 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 ANKRD16Q6P6B7 361 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 ZNF813Q6ZN06 617 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 ABHD12BQ7Z5M8 362 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 JAGN1Q8N5M9 183 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 MRPL15Q9P015 296 aaKnown RBP14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 ZNF407Q9C0G0 2248 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 LAMA5O15230 3695 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 LOC390937A0A1W2PQ73 354 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 MEGF11A6BM72 1044 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 F5H5K5 113 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 GABARAPH6UMI1 98 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 EFSO43281 561 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 SULT1B1O43704 296 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 KDM4BO94953 1096 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 MNDAP41218 407 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 TATDN3Q17R31 274 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 ZNF552Q9H707 407 aaPredicted RBP14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 PLEKHA1Q9HB21 404 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 KLK11Q9UBX7 282 aa14.97□□□□□ -0.01
SHKBP1-216ENST00000598201 XRCC3O43542 346 aa14.96□□□□□ -0.01
SHKBP1-216ENST00000598201 CCNKO75909 580 aa14.96□□□□□ -0.01
SHKBP1-216ENST00000598201 ABOP16442 354 aa14.96□□□□□ -0.01
SHKBP1-216ENST00000598201 SOX8P57073 446 aa14.96□□□□□ -0.01
SHKBP1-216ENST00000598201 PPIAP62937 165 aaKnown RBP14.96□□□□□ -0.01
SHKBP1-216ENST00000598201 GFOD2Q3B7J2 385 aa14.96□□□□□ -0.01
SHKBP1-216ENST00000598201 ELFN2Q5R3F8 820 aa14.96□□□□□ -0.01
SHKBP1-216ENST00000598201 COMMD2Q86X83 199 aa14.96□□□□□ -0.01
SHKBP1-216ENST00000598201 GPR137CQ8N3F9 429 aa14.96□□□□□ -0.01
SHKBP1-216ENST00000598201 KDF1Q8NAX2 398 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-216ENST00000598201 OR52N4Q8NGI2 321 aa14.96□□□□□ -0.01
SHKBP1-216ENST00000598201 OR4D6Q8NGJ1 314 aa14.96□□□□□ -0.01
SHKBP1-216ENST00000598201 OR6M1Q8NGM8 313 aa14.96□□□□□ -0.01
SHKBP1-216ENST00000598201 FAM71F1Q96KD3 344 aaPredicted RBP14.96□□□□□ -0.01
SHKBP1-216ENST00000598201 TMEM38BQ9NVV0 291 aa14.96□□□□□ -0.01
SHKBP1-216ENST00000598201 CSAG2Q9Y5P2 127 aa14.96□□□□□ -0.01
SHKBP1-216ENST00000598201 CIB4A0PJX0 185 aa14.96□□□□□ -0.02
SHKBP1-216ENST00000598201 KLRC4-KLRK1H3BQV0 150 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms