RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 SLC25A40Q8TBP6 338 aa10.59□□□□□ -0.71
UPF1-203ENST00000594504 ZNRF4Q8WWF5 429 aa10.59□□□□□ -0.71
UPF1-203ENST00000594504 CCL17Q92583 94 aa10.59□□□□□ -0.71
UPF1-203ENST00000594504 PTP4A1Q93096 173 aa10.59□□□□□ -0.71
UPF1-203ENST00000594504 OTULINQ96BN8 352 aa10.59□□□□□ -0.71
UPF1-203ENST00000594504 HCAR1Q9BXC0 346 aa10.59□□□□□ -0.71
UPF1-203ENST00000594504 MED20Q9H944 212 aa10.59□□□□□ -0.71
UPF1-203ENST00000594504 ELOVL3Q9HB03 270 aa10.59□□□□□ -0.71
UPF1-203ENST00000594504 NKIRAS2Q9NYR9 191 aa10.59□□□□□ -0.71
UPF1-203ENST00000594504 TVP23BQ9NYZ1 205 aa10.59□□□□□ -0.71
UPF1-203ENST00000594504 COMMD3-BMI1R4GMX3 469 aa10.59□□□□□ -0.71
UPF1-203ENST00000594504 A0A0A6YYJ9 748 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 ZAR1LA6NP61 321 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 EI24O14681 340 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 PRODHO43272 600 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 GLCEO94923 617 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 NGFP01138 241 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 IGHV3-13P01766 116 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 ALPLP05186 524 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 ANPEPP15144 967 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 EPHA1P21709 976 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 EPHA2P29317 976 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 ENTPD1P49961 510 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 ZNF81P51508 661 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 MMP15P51511 669 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 ACTG1P63261 375 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 ECH1Q13011 328 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 PCK2Q16822 640 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 PCGF3Q3KNV8 242 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 TEX30Q5JUR7 227 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 LINC01590Q5TEZ4 76 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 SLX4IPQ5VYV7 408 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 PLBD1Q6P4A8 553 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 LYPD4Q6UWN0 246 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 CFAP77Q6ZQR2 320 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 CPOQ8IVL8 374 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 LINC00346Q8IVM7 164 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 ZNF511Q8NB15 262 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 ZNF418Q8TF45 676 aaPredicted RBP10.58□□□□□ -0.72
UPF1-203ENST00000594504 IPCEF1Q8WWN9 437 aaPredicted RBP10.58□□□□□ -0.72
UPF1-203ENST00000594504 MARS2Q96GW9 593 aaKnown RBP10.58□□□□□ -0.72
UPF1-203ENST00000594504 C4orf45Q96LM5 186 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 DCLRE1CQ96SD1 692 aaKnown RBP10.58□□□□□ -0.72
UPF1-203ENST00000594504 COQ7Q99807 217 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 GABARAPL3Q9BY60 117 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 OR2J1Q9GZK6 312 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 OR51V1Q9H2C8 321 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 WDR76Q9H967 626 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 DCAF16Q9NXF7 216 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 USE1Q9NZ43 259 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 ORC6Q9Y5N6 252 aa10.58□□□□□ -0.72
UPF1-203ENST00000594504 CLDN25C9JDP6 229 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 J3QW42 95 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 ABHD16AO95870 558 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 IGHV2-5P01817 119 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 GSTT1P30711 240 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 GCH1P30793 250 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 ALDH3A2P51648 485 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 RAD23AP54725 363 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 HFEQ30201 348 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 ZNF718Q3SXZ3 478 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 SLC35D3Q5M8T2 416 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 C12orf73Q69YU5 71 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 CBR4Q8N4T8 237 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 ABHD4Q8TB40 342 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 KLF14Q8TD94 323 aaPredicted RBP10.57□□□□□ -0.72
UPF1-203ENST00000594504 C22orf15Q8WYQ4 148 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 INTS14Q96SY0 518 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 PITX2Q99697 317 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 C9orf16Q9BUW7 83 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 RIBC2Q9H4K1 309 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 MARCH7Q9H992 704 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 SAP30LQ9HAJ7 183 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 TBCCD1Q9NVR7 557 aa10.57□□□□□ -0.72
UPF1-203ENST00000594504 TMEM89A2RUT3 159 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 ZSCAN5BA6NJL1 495 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 ANKRD65E5RJM6 399 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 H3BSA7 217 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 ZNF593O00488 134 aaPredicted RBP10.56□□□□□ -0.72
UPF1-203ENST00000594504 PRKYO43930 277 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 BAG2O95816 211 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 SPARCP09486 303 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 TUBG1P23258 451 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 POLR2IP36954 125 aaKnown RBP10.56□□□□□ -0.72
UPF1-203ENST00000594504 RPS27P42677 84 aaKnown RBP10.56□□□□□ -0.72
UPF1-203ENST00000594504 RGS6P49758 472 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 HILS1P60008 231 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 PPP1CBP62140 327 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 LCN2P80188 198 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 MOGQ16653 247 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 KLHL12Q53G59 568 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 DCAF12L2Q5VW00 463 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 RFPL4BQ6ZWI9 263 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 DCXRQ7Z4W1 244 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 ERI1Q8IV48 349 aaKnown RBP10.56□□□□□ -0.72
UPF1-203ENST00000594504 BBS1Q8NFJ9 593 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 OR6N2Q8NGY6 317 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 ZFAND2BQ8WV99 257 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 SLC7A6Q92536 515 aa10.56□□□□□ -0.72
UPF1-203ENST00000594504 RAB1CQ92928 201 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms