RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 PPP1R3DO95685 299 aa17.08■□□□□ 0.33
LSM4-203ENST00000593829 PTAFRP25105 342 aa17.08■□□□□ 0.33
LSM4-203ENST00000593829 TATDN3Q17R31 274 aa17.08■□□□□ 0.33
LSM4-203ENST00000593829 SLC25A47Q6Q0C1 308 aa17.08■□□□□ 0.33
LSM4-203ENST00000593829 SLC22A24Q8N4F4 322 aa17.08■□□□□ 0.33
LSM4-203ENST00000593829 C19orf18Q8NEA5 215 aa17.08■□□□□ 0.33
LSM4-203ENST00000593829 OR52L1Q8NGH7 329 aa17.08■□□□□ 0.33
LSM4-203ENST00000593829 UFD1Q92890 307 aa17.08■□□□□ 0.33
LSM4-203ENST00000593829 KCNJ15Q99712 375 aa17.08■□□□□ 0.33
LSM4-203ENST00000593829 TMEM204Q9BSN7 226 aa17.08■□□□□ 0.33
LSM4-203ENST00000593829 EGLN3Q9H6Z9 239 aa17.08■□□□□ 0.33
LSM4-203ENST00000593829 IL20Q9NYY1 176 aa17.08■□□□□ 0.33
LSM4-203ENST00000593829 TVP23BQ9NYZ1 205 aa17.08■□□□□ 0.33
LSM4-203ENST00000593829 ABCA4P78363 2273 aa17.08■□□□□ 0.32
LSM4-203ENST00000593829 PRSS37A4D1T9 235 aa17.08■□□□□ 0.32
LSM4-203ENST00000593829 H7C1C5 153 aa17.08■□□□□ 0.32
LSM4-203ENST00000593829 IMPA2O14732 288 aa17.08■□□□□ 0.32
LSM4-203ENST00000593829 ARPC3O15145 178 aa17.08■□□□□ 0.32
LSM4-203ENST00000593829 PRODHO43272 600 aa17.08■□□□□ 0.32
LSM4-203ENST00000593829 TLX2O43763 284 aaPredicted RBP17.08■□□□□ 0.32
LSM4-203ENST00000593829 OR8G3PP0DMU2 310 aa17.08■□□□□ 0.32
LSM4-203ENST00000593829 GIPRP48546 466 aa17.08■□□□□ 0.32
LSM4-203ENST00000593829 LCN6P62502 163 aa17.08■□□□□ 0.32
LSM4-203ENST00000593829 TRIQKQ629K1 86 aa17.08■□□□□ 0.32
LSM4-203ENST00000593829 ZNF704Q6ZNC4 412 aaPredicted RBP17.08■□□□□ 0.32
LSM4-203ENST00000593829 UTS2BQ765I0 119 aa17.08■□□□□ 0.32
LSM4-203ENST00000593829 UBASH3BQ8TF42 649 aa17.08■□□□□ 0.32
LSM4-203ENST00000593829 NSMAFQ92636 917 aa17.08■□□□□ 0.32
LSM4-203ENST00000593829 ING3Q9NXR8 418 aa17.08■□□□□ 0.32
LSM4-203ENST00000593829 ALG5Q9Y673 324 aa17.08■□□□□ 0.32
LSM4-203ENST00000593829 IGKV1D-43A0A0B4J1Z2 117 aa17.07■□□□□ 0.32
LSM4-203ENST00000593829 SLC22A23A1A5C7 686 aa17.07■□□□□ 0.32
LSM4-203ENST00000593829 FARS2O95363 451 aaKnown RBP17.07■□□□□ 0.32
LSM4-203ENST00000593829 PLAUP00749 431 aa17.07■□□□□ 0.32
LSM4-203ENST00000593829 SLC2A2P11168 524 aaPredicted RBP17.07■□□□□ 0.32
LSM4-203ENST00000593829 CD40P25942 277 aa17.07■□□□□ 0.32
LSM4-203ENST00000593829 RPS25P62851 125 aaKnown RBP17.07■□□□□ 0.32
LSM4-203ENST00000593829 GINS1Q14691 196 aa17.07■□□□□ 0.32
LSM4-203ENST00000593829 NRN1LQ496H8 165 aa17.07■□□□□ 0.32
LSM4-203ENST00000593829 SIGIRRQ6IA17 410 aa17.07■□□□□ 0.32
LSM4-203ENST00000593829 FAM169BQ8N8A8 192 aa17.07■□□□□ 0.32
LSM4-203ENST00000593829 ZNF485Q8NCK3 441 aa17.07■□□□□ 0.32
LSM4-203ENST00000593829 NANOS1Q8WY41 292 aaKnown RBP17.07■□□□□ 0.32
LSM4-203ENST00000593829 NOTCH2Q04721 2471 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 A0A0G2JMP0 313 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 ABCD4O14678 606 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 HLA-HP01893 362 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 CBR1P16152 277 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 GALP22466 123 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 NOS3P29474 1203 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 EVX1P49640 407 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 ACSM1Q08AH1 577 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 CLEC12AQ5QGZ9 265 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 SKA3Q8IX90 412 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 NRGNQ92686 78 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 B3GNT2Q9NY97 397 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 EDARQ9UNE0 448 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 ZNF503-AS2A6NEH8 195 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 ORC5O43913 435 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 CD79AP11912 226 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 HTR2BP41595 481 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 MRPS34P82930 218 aaKnown RBP17.06■□□□□ 0.32
LSM4-203ENST00000593829 C3orf36Q3SXR2 165 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 CNIH2Q6PI25 160 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 BCDIN3DQ7Z5W3 292 aaKnown RBP17.06■□□□□ 0.32
LSM4-203ENST00000593829 Q8N402 240 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 RADILQ96JH8 1075 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 SLC38A2Q96QD8 506 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 PLA2G12AQ9BZM1 189 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 VSX1Q9NZR4 365 aaPredicted RBP17.06■□□□□ 0.32
LSM4-203ENST00000593829 ADAM30Q9UKF2 790 aa17.06■□□□□ 0.32
LSM4-203ENST00000593829 LYRM1O43325 122 aa17.05■□□□□ 0.32
LSM4-203ENST00000593829 UBL3O95164 117 aa17.05■□□□□ 0.32
LSM4-203ENST00000593829 NPR2P20594 1047 aa17.05■□□□□ 0.32
LSM4-203ENST00000593829 APEX1P27695 318 aaKnown RBP17.05■□□□□ 0.32
LSM4-203ENST00000593829 ARR3P36575 388 aa17.05■□□□□ 0.32
LSM4-203ENST00000593829 CDKN2AP42771 156 aaKnown RBP17.05■□□□□ 0.32
LSM4-203ENST00000593829 GUCA1AP43080 201 aaPredicted RBP17.05■□□□□ 0.32
LSM4-203ENST00000593829 RRAS2P62070 204 aaPredicted RBP17.05■□□□□ 0.32
LSM4-203ENST00000593829 BTG1P62324 171 aa17.05■□□□□ 0.32
LSM4-203ENST00000593829 ADAM5Q6NVV9 412 aa17.05■□□□□ 0.32
LSM4-203ENST00000593829 MZT2AQ6P582 158 aa17.05■□□□□ 0.32
LSM4-203ENST00000593829 MDP1Q86V88 176 aa17.05■□□□□ 0.32
LSM4-203ENST00000593829 PIAS4Q8N2W9 510 aaPredicted RBP17.05■□□□□ 0.32
LSM4-203ENST00000593829 DEDD2Q8WXF8 326 aa17.05■□□□□ 0.32
LSM4-203ENST00000593829 LIME1Q9H400 295 aa17.05■□□□□ 0.32
LSM4-203ENST00000593829 UBTD1Q9HAC8 227 aa17.05■□□□□ 0.32
LSM4-203ENST00000593829 ZNF224Q9NZL3 707 aa17.05■□□□□ 0.32
LSM4-203ENST00000593829 IGHV1-18A0A0C4DH31 117 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 CRYZL1O95825 349 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 IGKV3-15P01624 115 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 CDAP32320 146 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 FABP5Q01469 135 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 MAB21L1Q13394 359 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 IKZF1Q13422 519 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 GSG1Q2KHT4 349 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 ACSM5Q6NUN0 579 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 DPPA2Q7Z7J5 298 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 CDH24Q86UP0 819 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 JAZF1Q86VZ6 243 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms