RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 ASH2LQ9UBL3 628 aa12.35□□□□□ -0.43
PNKP-202ENST00000593706 COA3Q9Y2R0 106 aaPredicted RBP12.35□□□□□ -0.43
PNKP-202ENST00000593706 POLR1DQ9Y2S0 133 aa12.35□□□□□ -0.43
PNKP-202ENST00000593706 IGHV2-70DA0A0C4DH43 119 aa12.34□□□□□ -0.43
PNKP-202ENST00000593706 OR6C6A6NF89 314 aa12.34□□□□□ -0.43
PNKP-202ENST00000593706 LRRC30A6NM36 301 aa12.34□□□□□ -0.43
PNKP-202ENST00000593706 KHDRBS3O75525 346 aaKnown RBP12.34□□□□□ -0.43
PNKP-202ENST00000593706 CYB5R3P00387 301 aaPredicted RBP12.34□□□□□ -0.43
PNKP-202ENST00000593706 PPIAL4GP0DN37 164 aa12.34□□□□□ -0.43
PNKP-202ENST00000593706 RAC2P15153 192 aa12.34□□□□□ -0.43
PNKP-202ENST00000593706 HIST1H1CP16403 213 aaKnown RBP12.34□□□□□ -0.43
PNKP-202ENST00000593706 MDKP21741 143 aaPredicted RBP12.34□□□□□ -0.43
PNKP-202ENST00000593706 SLC6A6P31641 620 aa12.34□□□□□ -0.43
PNKP-202ENST00000593706 SRP9P49458 86 aaKnown RBP12.34□□□□□ -0.43
PNKP-202ENST00000593706 LSM6P62312 80 aaKnown RBP12.34□□□□□ -0.43
PNKP-202ENST00000593706 HIST1H3AP68431 136 aa12.34□□□□□ -0.43
PNKP-202ENST00000593706 PAX8Q06710 450 aa12.34□□□□□ -0.43
PNKP-202ENST00000593706 HLXQ14774 488 aaPredicted RBP12.34□□□□□ -0.43
PNKP-202ENST00000593706 MIDNQ504T8 468 aa12.34□□□□□ -0.43
PNKP-202ENST00000593706 HIST2H3PS2Q5TEC6 136 aa12.34□□□□□ -0.43
PNKP-202ENST00000593706 C9orf139Q6ZV77 190 aa12.34□□□□□ -0.43
PNKP-202ENST00000593706 HIST2H3AQ71DI3 136 aa12.34□□□□□ -0.43
PNKP-202ENST00000593706 NLRC3Q7RTR2 1065 aa12.34□□□□□ -0.43
PNKP-202ENST00000593706 DHFR2Q86XF0 187 aa12.34□□□□□ -0.43
PNKP-202ENST00000593706 KLBQ86Z14 1044 aa12.34□□□□□ -0.43
PNKP-202ENST00000593706 BHLHE23Q8NDY6 225 aa12.34□□□□□ -0.43
PNKP-202ENST00000593706 OR9Q2Q8NGE9 314 aa12.34□□□□□ -0.43
PNKP-202ENST00000593706 OR5L1Q8NGL2 311 aa12.34□□□□□ -0.43
PNKP-202ENST00000593706 PTP4A1Q93096 173 aa12.34□□□□□ -0.43
PNKP-202ENST00000593706 ERMAPQ96PL5 475 aaPredicted RBP12.34□□□□□ -0.43
PNKP-202ENST00000593706 PTTG3PQ9NZH4 202 aa12.34□□□□□ -0.43
PNKP-202ENST00000593706 MIOXQ9UGB7 285 aa12.34□□□□□ -0.43
PNKP-202ENST00000593706 IGHV3-64DA0A0J9YX35 117 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 MDFIC2A0A1B0GVS7 189 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 J3QW42 95 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 BHLHE40O14503 412 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 WNT2P09544 360 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 OMGP23515 440 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 IFNGR2P38484 337 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 RGS6P49758 472 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 OR2T2Q6IF00 324 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 TRPM8Q7Z2W7 1104 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 ZBTB46Q86UZ6 589 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 MOGAT3Q86VF5 341 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 C1orf87Q8N0U7 546 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 OR6V1Q8N148 313 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 SLC26A10Q8NG04 563 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 OR8B3Q8NGG8 313 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 OR8D4Q8NGM9 314 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 OR13G1Q8NGZ3 307 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 OR1F12Q8NHA8 337 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 GNPDA2Q8TDQ7 276 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 ZDHHC16Q969W1 377 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 TMIGD2Q96BF3 282 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 UPRTQ96BW1 309 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 CCDC124Q96CT7 223 aaKnown RBP12.33□□□□□ -0.44
PNKP-202ENST00000593706 NEIL1Q96FI4 390 aaPredicted RBP12.33□□□□□ -0.44
PNKP-202ENST00000593706 MEGF10Q96KG7 1140 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 ZNF582Q96NG8 517 aaPredicted RBP12.33□□□□□ -0.44
PNKP-202ENST00000593706 OR8B2Q96RD0 313 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 NMNAT3Q96T66 252 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 DDOQ99489 341 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 SLITRK2Q9H156 845 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 EGLN3Q9H6Z9 239 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 IL20Q9NYY1 176 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 ATPIF1Q9UII2 106 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 TMCC3Q9ULS5 477 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 SOX21Q9Y651 276 aaPredicted RBP12.33□□□□□ -0.44
PNKP-202ENST00000593706 LHFPL6Q9Y693 200 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 CDH10Q9Y6N8 788 aa12.33□□□□□ -0.44
PNKP-202ENST00000593706 TNFRSF11BO00300 401 aa12.32□□□□□ -0.44
PNKP-202ENST00000593706 HOXA3O43365 443 aaPredicted RBP12.32□□□□□ -0.44
PNKP-202ENST00000593706 IDH3BO43837 385 aa12.32□□□□□ -0.44
PNKP-202ENST00000593706 PLATP00750 562 aa12.32□□□□□ -0.44
PNKP-202ENST00000593706 DBHP09172 617 aa12.32□□□□□ -0.44
PNKP-202ENST00000593706 CPT2P23786 658 aa12.32□□□□□ -0.44
PNKP-202ENST00000593706 CRABP1P29762 137 aa12.32□□□□□ -0.44
PNKP-202ENST00000593706 PITPNBP48739 271 aa12.32□□□□□ -0.44
PNKP-202ENST00000593706 MEP1BQ16820 701 aa12.32□□□□□ -0.44
PNKP-202ENST00000593706 KRTAP27-1Q3LI81 207 aa12.32□□□□□ -0.44
PNKP-202ENST00000593706 CCDC92Q53HC0 331 aaPredicted RBP12.32□□□□□ -0.44
PNKP-202ENST00000593706 ZNF362Q5T0B9 420 aaPredicted RBP12.32□□□□□ -0.44
PNKP-202ENST00000593706 PGM2L1Q6PCE3 622 aa12.32□□□□□ -0.44
PNKP-202ENST00000593706 BRD3OSQ6XYD6 125 aa12.32□□□□□ -0.44
PNKP-202ENST00000593706 C17orf107Q6ZR85 190 aa12.32□□□□□ -0.44
PNKP-202ENST00000593706 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.32□□□□□ -0.44
PNKP-202ENST00000593706 ADGRG5Q8IZF4 528 aa12.32□□□□□ -0.44
PNKP-202ENST00000593706 OR8G5Q8NG78 346 aa12.32□□□□□ -0.44
PNKP-202ENST00000593706 RAB40AQ8WXH6 277 aa12.32□□□□□ -0.44
PNKP-202ENST00000593706 TMEM246Q9BRR3 403 aa12.32□□□□□ -0.44
PNKP-202ENST00000593706 IFT27Q9BW83 186 aa12.32□□□□□ -0.44
PNKP-202ENST00000593706 TMEM165Q9HC07 324 aa12.32□□□□□ -0.44
PNKP-202ENST00000593706 TNFRSF19Q9NS68 423 aa12.32□□□□□ -0.44
PNKP-202ENST00000593706 OR6C68A6NDL8 312 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 F5H5P2 479 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 RER1O15258 196 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 KNG1P01042 644 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 GASTP01350 101 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 CRYBA1P05813 215 aa12.31□□□□□ -0.44
PNKP-202ENST00000593706 IRF2P14316 349 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms