RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 LIPHQ8WWY8 451 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 FGF13Q92913 245 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 KISS1RQ969F8 398 aaPredicted RBP3.19□□□□□ -1.9
VMP1-216ENST00000592790 FGGYQ96C11 551 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 SLC25A38Q96DW6 304 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 FAM122AQ96E09 287 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 WNT5BQ9H1J7 359 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 ZNF160Q9HCG1 818 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 NIT2Q9NQR4 276 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 PARP11Q9NR21 331 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 LPAR3Q9UBY5 353 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 MRM2Q9UI43 246 aaKnown RBP3.19□□□□□ -1.9
VMP1-216ENST00000592790 A0A1W2PQD3 144 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 TMEM235A6NFC5 223 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 TLCD2A6NGC4 264 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 METTL12A8MUP2 240 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 RAB27BO00194 218 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 PPP1R2P9O14990 202 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 ZNF354AO60765 605 aaPredicted RBP3.19□□□□□ -1.9
VMP1-216ENST00000592790 CTSVO60911 334 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 ZNF217O75362 1048 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 ABHD16AO95870 558 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 GAPDHP04406 335 aaKnown RBP3.19□□□□□ -1.9
VMP1-216ENST00000592790 HEXBP07686 556 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 ZNF728P0DKX0 622 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 HOXB3P14651 431 aaPredicted RBP3.19□□□□□ -1.9
VMP1-216ENST00000592790 NME2P22392 152 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 MPGP29372 298 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 SFTPDP35247 375 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 EIF2S3P41091 472 aaKnown RBP3.19□□□□□ -1.9
VMP1-216ENST00000592790 CAV2P51636 162 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 CEBPGP53567 150 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 ADPRHP54922 357 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 UBE2KP61086 200 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 PCBD1P61457 104 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 ECH1Q13011 328 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 EBPQ15125 230 aaKnown RBP3.19□□□□□ -1.9
VMP1-216ENST00000592790 NSDHLQ15738 373 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 MLF2Q15773 248 aaPredicted RBP3.19□□□□□ -1.9
VMP1-216ENST00000592790 ACKR1Q16570 336 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 PRSS53Q2L4Q9 553 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 WDR38Q5JTN6 314 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 SPIN3Q5JUX0 258 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 SFRP5Q5T4F7 317 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 COL13A1Q5TAT6 717 aaPredicted RBP3.19□□□□□ -1.9
VMP1-216ENST00000592790 ATPAF1Q5TC12 328 aaPredicted RBP3.19□□□□□ -1.9
VMP1-216ENST00000592790 FAM180AQ6UWF9 173 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 GLIPR1L1Q6UWM5 242 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 FBXW12Q6X9E4 464 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 Q6ZSR6 202 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 SLC35D2Q76EJ3 337 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 DCXRQ7Z4W1 244 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 NAA40Q86UY6 237 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 ZNF695Q8IW36 515 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 AMER3Q8N944 861 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 CLEC1AQ8NC01 280 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 FAM3CQ92520 227 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 FGF14Q92915 247 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 RAB39BQ96DA2 213 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 TM4SF19Q96DZ7 209 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 PIK3IP1Q96FE7 263 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 TOE1Q96GM8 510 aaKnown RBP3.19□□□□□ -1.9
VMP1-216ENST00000592790 CRB3Q9BUF7 120 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 ST6GALNAC5Q9BVH7 336 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 HEXA-AS1Q9H8Q6 139 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 FGF22Q9HCT0 170 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 CHST11Q9NPF2 352 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 CA10Q9NS85 328 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 ALKBH4Q9NXW9 302 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 KCMF1Q9P0J7 381 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 FRRS1LQ9P0K9 344 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 TBC1D29Q9UFV1 150 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 TBX21Q9UL17 535 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 PCDHGA5Q9Y5G8 931 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 DMRT1Q9Y5R6 373 aa3.19□□□□□ -1.9
VMP1-216ENST00000592790 H3BSH0 61 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 P2RY10O00398 339 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 SCAMP1O15126 338 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 MBTPS2O43462 519 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 OIP5O43482 229 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 DDAH2O95865 285 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 CFDP00746 253 aaPredicted RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 PMP2P02689 132 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 HOXB5P09067 269 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 SFTA3P0C7M3 94 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 TMEM225BP0DP42 221 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 CD37P11049 281 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 GNRHRP30968 328 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 HRH1P35367 487 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 OR1D4P47884 311 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 ATP1B3P54709 279 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 ZP1P60852 638 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 HNRNPKP61978 463 aaKnown RBP eCLIP3.18□□□□□ -1.91e-38■■□□□ 14.3
VMP1-216ENST00000592790 SNRPNP63162 240 aaKnown RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 SLC35A1P78382 337 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 MALLQ13021 153 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 CHAF1BQ13112 559 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 KCNAB1Q14722 419 aa3.18□□□□□ -1.9
VMP1-216ENST00000592790 DHRS7BQ6IAN0 325 aaPredicted RBP3.18□□□□□ -1.9
VMP1-216ENST00000592790 C6orf15Q6UXA7 325 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms