RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-233	ENST00000591622	RTTN	Q86VV8	2226 aa		13.9	□□□□□ -0.18
CIRBP-233	ENST00000591622	CLDN25	C9JDP6	229 aa		13.9	□□□□□ -0.18
CIRBP-233	ENST00000591622	ZNF878	C9JN71	531 aa		13.9	□□□□□ -0.18
CIRBP-233	ENST00000591622	PRODH	O43272	600 aa		13.9	□□□□□ -0.18
CIRBP-233	ENST00000591622	SLC15A1	P46059	708 aa		13.9	□□□□□ -0.18
CIRBP-233	ENST00000591622	SLC6A9	P48067	706 aa		13.9	□□□□□ -0.18
CIRBP-233	ENST00000591622	ESRRG	P62508	458 aa		13.9	□□□□□ -0.18
CIRBP-233	ENST00000591622	MVK	Q03426	396 aa		13.9	□□□□□ -0.18
CIRBP-233	ENST00000591622	EIF2B1	Q14232	305 aa	Known RBP	13.9	□□□□□ -0.18
CIRBP-233	ENST00000591622	PTGES3	Q15185	160 aa	Known RBP	13.9	□□□□□ -0.18
CIRBP-233	ENST00000591622	TAF13	Q15543	124 aa		13.9	□□□□□ -0.18
CIRBP-233	ENST00000591622	TIGD4	Q8IY51	512 aa		13.9	□□□□□ -0.18
CIRBP-233	ENST00000591622	OR6N2	Q8NGY6	317 aa		13.9	□□□□□ -0.18
CIRBP-233	ENST00000591622	OR13G1	Q8NGZ3	307 aa		13.9	□□□□□ -0.18
CIRBP-233	ENST00000591622	ZMYND19	Q96E35	227 aa	Predicted RBP	13.9	□□□□□ -0.18
CIRBP-233	ENST00000591622	KCNJ15	Q99712	375 aa		13.9	□□□□□ -0.18
CIRBP-233	ENST00000591622	KRT84	Q9NSB2	600 aa		13.9	□□□□□ -0.18
CIRBP-233	ENST00000591622	TREM2	Q9NZC2	230 aa		13.9	□□□□□ -0.18
CIRBP-233	ENST00000591622	IL19	Q9UHD0	177 aa		13.9	□□□□□ -0.18
CIRBP-233	ENST00000591622	KCNS2	Q9ULS6	477 aa		13.9	□□□□□ -0.18
CIRBP-233	ENST00000591622	IQCF6	A8MYZ5	107 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	MITF	O75030	526 aa	Predicted RBP	13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	SELE	P16581	610 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	TNFRSF1A	P19438	455 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	PRKX	P51817	358 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	CDH15	P55291	814 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	SLC3A1	Q07837	685 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	SNAPC1	Q16533	368 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	SNAI3	Q3KNW1	292 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	CHRFAM7A	Q494W8	412 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	KLHL12	Q53G59	568 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	SLC35D3	Q5M8T2	416 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	AVPI1	Q5T686	147 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	KDM4D	Q6B0I6	523 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	PGAP1	Q75T13	922 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	SPATC1	Q76KD6	591 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	RHOU	Q7L0Q8	258 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	CXXC5	Q7LFL8	322 aa	Known RBP	13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	SHF	Q7M4L6	423 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	LINC01356	Q8N9X3	169 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	BHLHE23	Q8NDY6	225 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	RAB1C	Q92928	201 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	TIMD4	Q96H15	378 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	SLC30A2	Q9BRI3	323 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	ABHD6	Q9BV23	337 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	GABARAPL1	Q9H0R8	117 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	TVP23B	Q9NYZ1	205 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	CDC42EP3	Q9UKI2	254 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	WIPI2	Q9Y4P8	454 aa		13.89	□□□□□ -0.19
CIRBP-233	ENST00000591622	NAV3	Q8IVL0	2385 aa		13.88	□□□□□ -0.19
CIRBP-233	ENST00000591622	EBAG9	O00559	213 aa		13.88	□□□□□ -0.19
CIRBP-233	ENST00000591622	SLC2A5	P22732	501 aa		13.88	□□□□□ -0.19
CIRBP-233	ENST00000591622	PRSS12	P56730	875 aa		13.88	□□□□□ -0.19
CIRBP-233	ENST00000591622	ACTR3	P61158	418 aa		13.88	□□□□□ -0.19
CIRBP-233	ENST00000591622	LMO4	P61968	165 aa		13.88	□□□□□ -0.19
CIRBP-233	ENST00000591622	GRB2	P62993	217 aa	Known RBP	13.88	□□□□□ -0.19
CIRBP-233	ENST00000591622	MRPL21	Q7Z2W9	205 aa	Known RBP	13.88	□□□□□ -0.19
CIRBP-233	ENST00000591622	PRIMA1	Q86XR5	153 aa		13.88	□□□□□ -0.19
CIRBP-233	ENST00000591622	BBS1	Q8NFJ9	593 aa		13.88	□□□□□ -0.19
CIRBP-233	ENST00000591622	RNF133	Q8WVZ7	376 aa		13.88	□□□□□ -0.19
CIRBP-233	ENST00000591622	CENPN	Q96H22	339 aa	Predicted RBP	13.88	□□□□□ -0.19
CIRBP-233	ENST00000591622	OR2V2	Q96R30	315 aa		13.88	□□□□□ -0.19
CIRBP-233	ENST00000591622	AMELY	Q99218	206 aa		13.88	□□□□□ -0.19
CIRBP-233	ENST00000591622	TOR3A	Q9H497	397 aa		13.88	□□□□□ -0.19
CIRBP-233	ENST00000591622	ABCA1	O95477	2261 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622		A0A1B0GWJ7	208 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	C5orf63	A6NC05	138 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622		B4DSR2	109 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	SELENOF	O60613	162 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	ANOS1	P23352	680 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	IGFBP5	P24593	272 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	RPS7	P62081	194 aa	Known RBP	13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	ZNF92	Q03936	586 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	GLYATL3	Q5SZD4	288 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	PEG10	Q86TG7	708 aa	Known RBP	13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	ZNF283	Q8N7M2	679 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	ZNF454	Q8N9F8	522 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	OR10AD1	Q8NGE0	317 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	OTOS	Q8NHW6	89 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	ITLN1	Q8WWA0	313 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	PYDC1	Q8WXC3	89 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	BEX2	Q9BXY8	128 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	PRRG3	Q9BZD7	231 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	SHARPIN	Q9H0F6	387 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	SEMA6A	Q9H2E6	1030 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	TMEM106B	Q9NUM4	274 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	TMEM100	Q9NV29	134 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	LPAR3	Q9UBY5	353 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	ENOPH1	Q9UHY7	261 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	OAZ3	Q9UMX2	235 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	PPP1R3C	Q9UQK1	317 aa		13.87	□□□□□ -0.19
CIRBP-233	ENST00000591622	CHD3	Q12873	2000 aa	Known RBP	13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	ANK3	Q12955	4377 aa	Known RBP	13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622		H0YL77	283 aa		13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	MLNR	O43193	412 aa		13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	APOC1	P02654	83 aa		13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	LYN	P07948	512 aa		13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	SLC2A1	P11166	492 aa		13.86	□□□□□ -0.19
CIRBP-233	ENST00000591622	HSD11B1	P28845	292 aa		13.86	□□□□□ -0.19

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