RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-228	ENST00000590347	CSRP1	P21291	193 aa	Known RBP	13.62	□□□□□ -0.23
CIRBP-228	ENST00000590347	CDKN2A	P42771	156 aa	Known RBP	13.62	□□□□□ -0.23
CIRBP-228	ENST00000590347	EXOSC7	Q15024	291 aa	Known RBP	13.62	□□□□□ -0.23
CIRBP-228	ENST00000590347	TOMM34	Q15785	309 aa	Predicted RBP	13.62	□□□□□ -0.23
CIRBP-228	ENST00000590347	ETFRF1	Q6IPR1	90 aa		13.62	□□□□□ -0.23
CIRBP-228	ENST00000590347	NPEPL1	Q8NDH3	523 aa		13.62	□□□□□ -0.23
CIRBP-228	ENST00000590347	OR2L5	Q8NG80	312 aa		13.62	□□□□□ -0.23
CIRBP-228	ENST00000590347	C15orf40	Q8WUR7	153 aa		13.62	□□□□□ -0.23
CIRBP-228	ENST00000590347	OVCA2	Q8WZ82	227 aa		13.62	□□□□□ -0.23
CIRBP-228	ENST00000590347	SDF2	Q99470	211 aa		13.62	□□□□□ -0.23
CIRBP-228	ENST00000590347	DUSP15	Q9H1R2	295 aa	Predicted RBP	13.62	□□□□□ -0.23
CIRBP-228	ENST00000590347	PDE7B	Q9NP56	450 aa		13.62	□□□□□ -0.23
CIRBP-228	ENST00000590347	TAS2R4	Q9NYW5	299 aa		13.62	□□□□□ -0.23
CIRBP-228	ENST00000590347	ICAM5	Q9UMF0	924 aa		13.62	□□□□□ -0.23
CIRBP-228	ENST00000590347	TRIO	O75962	3097 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	COL4A6	Q14031	1691 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	GRM6	O15303	877 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	LYPD3	O95274	346 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	UBE2V2	Q15819	145 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	HAGH	Q16775	308 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	ALG10B	Q5I7T1	473 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	DMRTA1	Q5VZB9	504 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	ASPHD2	Q6ICH7	369 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	TIPARP	Q7Z3E1	657 aa	Known RBP	13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	TMEM229B	Q8NBD8	167 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	ZNF426	Q9BUY5	554 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	MTHFD2L	Q9H903	347 aa	Predicted RBP	13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	HAO2	Q9NYQ3	351 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	TIMP1	P01033	207 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	IFNA10	P01566	189 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	PGA3	P0DJD8	388 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	GABRA4	P48169	554 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	FHL1	Q13642	323 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	VIT	Q6UXI7	678 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	P4HA3	Q7Z4N8	544 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	C12orf76	Q8N812	135 aa	Predicted RBP	13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	ABHD5	Q8WTS1	349 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	EDA	Q92838	391 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	ERGIC1	Q969X5	290 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	SAT2	Q96F10	170 aa	Predicted RBP	13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	GNRHR2	Q96P88	292 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	SPACA5	Q96QH8	159 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	TMEM74B	Q9NUR3	256 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	PRODH2	Q9UF12	536 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	KCNIP3	Q9Y2W7	256 aa		13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.61	□□□□□ -0.23
CIRBP-228	ENST00000590347	NUDT19	A8MXV4	375 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	SDCBP	O00560	298 aa	Predicted RBP	13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	SNCA	P37840	140 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	ANKRD55	Q3KP44	614 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	SOHLH1	Q5JUK2	328 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	NCR3LG1	Q68D85	454 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347		Q6ZNB5	142 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	ZNF248	Q8NDW4	579 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	OR9K2	Q8NGE7	335 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	BAD	Q92934	168 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	HIST1H2BL	Q99880	126 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	LAMP5	Q9UJQ1	280 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	WIPF3	A6NGB9	483 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	OR4C45	A6NMZ5	311 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	TNFSF12	O43508	249 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	KNG1	P01042	644 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	HLA-DQA2	P01906	255 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	MAP3K8	P41279	467 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	SULT1A2	P50226	295 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	BTN3A2	P78410	334 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	NAAA	Q02083	359 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	TLE1	Q04724	770 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	WDR38	Q5JTN6	314 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	TMPRSS11F	Q6ZWK6	438 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	MARCH3	Q86UD3	253 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	UBQLN4	Q9NRR5	601 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	ZNF780B	Q9Y6R6	833 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	TICRR	Q7Z2Z1	1910 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347	DOCK9	Q9BZ29	2069 aa		13.6	□□□□□ -0.23
CIRBP-228	ENST00000590347		A0A0A6YYH2	397 aa		13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347		A6NJ64	397 aa		13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347	BCL6	P41182	706 aa		13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347	EMD	P50402	254 aa		13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347	CCL20	P78556	96 aa		13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347	SRSF5	Q13243	272 aa	Known RBP	13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347	CARF	Q8N187	725 aa		13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347	RAB39B	Q96DA2	213 aa		13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347	OR2M4	Q96R27	311 aa		13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347	ABHD14A	Q9BUJ0	271 aa		13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347	MFRP	Q9BY79	579 aa		13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347	CNTNAP3	Q9BZ76	1288 aa		13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347	COMMD4	Q9H0A8	199 aa		13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347	GOLT1B	Q9Y3E0	138 aa		13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347	SLC33A1	O00400	549 aa	Predicted RBP	13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347	CD37	P11049	281 aa		13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347	HIST1H1T	P22492	207 aa	Predicted RBP	13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347	FCGR2C	P31995	323 aa		13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347	KIR3DL2	P43630	455 aa		13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347	LBX1	P52954	281 aa		13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347	TRAM1L1	Q8N609	369 aa		13.59	□□□□□ -0.23
CIRBP-228	ENST00000590347	GATS	Q8NAP1	163 aa		13.59	□□□□□ -0.23

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