RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 SYNPRQ8TBG9 265 aa2.05□□□□□ -2.08
SMAD4-207ENST00000589076 OR51E1Q8TCB6 317 aa2.05□□□□□ -2.08
SMAD4-207ENST00000589076 AGR3Q8TD06 166 aa2.05□□□□□ -2.08
SMAD4-207ENST00000589076 GLYATL2Q8WU03 294 aa2.05□□□□□ -2.08
SMAD4-207ENST00000589076 RGP1Q92546 391 aaPredicted RBP2.05□□□□□ -2.08
SMAD4-207ENST00000589076 FRZBQ92765 325 aa2.05□□□□□ -2.08
SMAD4-207ENST00000589076 PTX4Q96A99 478 aa2.05□□□□□ -2.08
SMAD4-207ENST00000589076 NRBF2Q96F24 287 aa2.05□□□□□ -2.08
SMAD4-207ENST00000589076 C9orf72Q96LT7 481 aa2.05□□□□□ -2.08
SMAD4-207ENST00000589076 HSD17B10Q99714 261 aaKnown RBP2.05□□□□□ -2.08
SMAD4-207ENST00000589076 SPIN2AQ99865 258 aa2.05□□□□□ -2.08
SMAD4-207ENST00000589076 SPIN2BQ9BPZ2 258 aa2.05□□□□□ -2.08
SMAD4-207ENST00000589076 CALN1Q9BXU9 219 aa2.05□□□□□ -2.08
SMAD4-207ENST00000589076 SLC7A5P2Q9GIP4 190 aa2.05□□□□□ -2.08
SMAD4-207ENST00000589076 BEX1Q9HBH7 125 aa2.05□□□□□ -2.08
SMAD4-207ENST00000589076 ACP6Q9NPH0 428 aa2.05□□□□□ -2.08
SMAD4-207ENST00000589076 MED4Q9NPJ6 270 aa2.05□□□□□ -2.08
SMAD4-207ENST00000589076 RABL2AQ9UBK7 228 aaPredicted RBP2.05□□□□□ -2.08
SMAD4-207ENST00000589076 GAKO14976 1311 aa2.05□□□□□ -2.08
SMAD4-207ENST00000589076 TNS2Q63HR2 1409 aa2.05□□□□□ -2.08
SMAD4-207ENST00000589076 BRWD3Q6RI45 1802 aa2.05□□□□□ -2.08
SMAD4-207ENST00000589076 DOCK8Q8NF50 2099 aa2.05□□□□□ -2.08
SMAD4-207ENST00000589076 ANKHD1Q8IWZ3 2542 aaKnown RBP2.05□□□□□ -2.08
SMAD4-207ENST00000589076 TNRC18O15417 2968 aaPredicted RBP2.04□□□□□ -2.08
SMAD4-207ENST00000589076 A0A0J9YXV3 536 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 TMEM120BA0PK00 339 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 TMEM150BA6NC51 233 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 NCF1BA6NI72 391 aaPredicted RBP2.04□□□□□ -2.08
SMAD4-207ENST00000589076 NCF1CA8MVU1 366 aaPredicted RBP2.04□□□□□ -2.08
SMAD4-207ENST00000589076 SUPT3HB4E1H0 165 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 DNASE2O00115 360 aaPredicted RBP2.04□□□□□ -2.08
SMAD4-207ENST00000589076 BPY2O14599 106 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 BCKDKO14874 412 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 RBFOX2O43251 390 aaKnown RBP eCLIP2.04□□□□□ -2.08
SMAD4-207ENST00000589076 FLNBO75369 2602 aaKnown RBP2.04□□□□□ -2.08
SMAD4-207ENST00000589076 REM1O75628 298 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 HLA-DQA1P01909 254 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 APCSP02743 223 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 IFNW1P05000 195 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 ADRA2AP08913 450 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 OR56A5P0C7T3 313 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 STAG3L3P0CL85 134 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 MUC1P15941 1255 aaPredicted RBP2.04□□□□□ -2.08
SMAD4-207ENST00000589076 CSNK2A2P19784 350 aaPredicted RBP2.04□□□□□ -2.08
SMAD4-207ENST00000589076 RAB4AP20338 218 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 RFC3P40938 356 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 RBM34P42696 430 aaKnown RBP2.04□□□□□ -2.08
SMAD4-207ENST00000589076 RPS5P46782 204 aaKnown RBP2.04□□□□□ -2.08
SMAD4-207ENST00000589076 DGCR6Q14129 220 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 TRMT5Q32P41 509 aaKnown RBP2.04□□□□□ -2.08
SMAD4-207ENST00000589076 SMUG1Q53HV7 270 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 ZNF684Q5T5D7 378 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 C2orf16Q68DN1 1984 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 TTC41PQ6P2S7 1318 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 CBLN2Q8IUK8 224 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 CDKL3Q8IVW4 592 aaPredicted RBP2.04□□□□□ -2.08
SMAD4-207ENST00000589076 OR52E5Q8NH55 327 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 PEX13Q92968 403 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 FLYWCH2Q96CP2 140 aaKnown RBP2.04□□□□□ -2.08
SMAD4-207ENST00000589076 BTN2A3PQ96KV6 586 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 RNF157Q96PX1 679 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 GPR21Q99679 349 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 SLC39A1Q9NY26 324 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 PSME2Q9UL46 239 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 RFNGQ9Y644 331 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 BPTFQ12830 3046 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
SMAD4-207ENST00000589076 SCN1AP35498 2009 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 ANKRD11Q6UB99 2663 aaPredicted RBP2.03□□□□□ -2.08
SMAD4-207ENST00000589076 PHLPP2Q6ZVD8 1323 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 TRAV19A0A0A6YYK7 116 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 IGHV3OR16-9A0A0B4J2B5 98 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 IGHV1OR15-9A0A0B4J2B8 117 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 A0A1B0GTQ1 180 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 LRCOL1A6NCL2 159 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 PDZK1P1A8MUH7 402 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 NME4O00746 187 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 SOCS1O15524 211 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 RALBP11234 206 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 USF1P22415 310 aaPredicted RBP2.03□□□□□ -2.08
SMAD4-207ENST00000589076 MYL9P24844 172 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 UBE2MP61081 183 aaKnown RBP2.03□□□□□ -2.08
SMAD4-207ENST00000589076 SPAG1Q07617 926 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 ZNF266Q14584 549 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 SNRNP35Q16560 246 aaKnown RBP2.03□□□□□ -2.08
SMAD4-207ENST00000589076 PLCXD3Q63HM9 321 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 ADNP2Q6IQ32 1131 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 SNX20Q7Z614 316 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 HORMAD1Q86X24 394 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 VKORC1L1Q8N0U8 176 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 OR4K5Q8NGD3 323 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 OR10G6Q8NH81 332 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 RPEQ96AT9 228 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 RNF145Q96MT1 663 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 ZNF317Q96PQ6 595 aaPredicted RBP2.03□□□□□ -2.08
SMAD4-207ENST00000589076 OR52D1Q9H346 318 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 TMEM27Q9HBJ8 222 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 MYOZ1Q9NP98 299 aaPredicted RBP2.03□□□□□ -2.08
SMAD4-207ENST00000589076 PXMP2Q9NR77 195 aa2.03□□□□□ -2.08
SMAD4-207ENST00000589076 DDX18Q9NVP1 670 aaKnown RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms