RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 CMTM4Q8IZR5 234 aa17.9■□□□□ 0.46
CAPNS1-205ENST00000588780 SPRYD4Q8WW59 207 aaPredicted RBP17.9■□□□□ 0.46
CAPNS1-205ENST00000588780 CLPTM1LQ96KA5 538 aa17.9■□□□□ 0.46
CAPNS1-205ENST00000588780 OOEPA6NGQ2 149 aa17.89■□□□□ 0.45
CAPNS1-205ENST00000588780 NPFFO15130 113 aa17.89■□□□□ 0.45
CAPNS1-205ENST00000588780 CD200P41217 278 aa17.89■□□□□ 0.45
CAPNS1-205ENST00000588780 POU4F2Q12837 409 aa17.89■□□□□ 0.45
CAPNS1-205ENST00000588780 DEFB121Q5J5C9 76 aa17.89■□□□□ 0.45
CAPNS1-205ENST00000588780 DHDDSQ86SQ9 333 aa17.89■□□□□ 0.45
CAPNS1-205ENST00000588780 R3HDM4Q96D70 268 aa17.89■□□□□ 0.45
CAPNS1-205ENST00000588780 RPUSD1Q9UJJ7 312 aaKnown RBP17.89■□□□□ 0.45
CAPNS1-205ENST00000588780 MEIOCA2RUB1 952 aa17.88■□□□□ 0.45
CAPNS1-205ENST00000588780 CENPAP49450 140 aa17.88■□□□□ 0.45
CAPNS1-205ENST00000588780 EFNB2P52799 333 aa17.88■□□□□ 0.45
CAPNS1-205ENST00000588780 EMX1Q04741 257 aaPredicted RBP17.88■□□□□ 0.45
CAPNS1-205ENST00000588780 SELPLGQ14242 412 aa17.88■□□□□ 0.45
CAPNS1-205ENST00000588780 FOXB2Q5VYV0 432 aa17.88■□□□□ 0.45
CAPNS1-205ENST00000588780 EPGNQ6UW88 154 aa17.88■□□□□ 0.45
CAPNS1-205ENST00000588780 DLEU7Q6UYE1 221 aa17.88■□□□□ 0.45
CAPNS1-205ENST00000588780 OAFQ86UD1 273 aa17.88■□□□□ 0.45
CAPNS1-205ENST00000588780 CFHR4Q92496 578 aa17.88■□□□□ 0.45
CAPNS1-205ENST00000588780 POLR2J2Q9GZM3 115 aaKnown RBP17.88■□□□□ 0.45
CAPNS1-205ENST00000588780 POLR2J3Q9H1A7 115 aaKnown RBP17.88■□□□□ 0.45
CAPNS1-205ENST00000588780 TENM3Q9P273 2699 aa17.87■□□□□ 0.45
CAPNS1-205ENST00000588780 hCG_1807616A0A1W2PRN6 198 aa17.87■□□□□ 0.45
CAPNS1-205ENST00000588780 A6NLC8 198 aa17.87■□□□□ 0.45
CAPNS1-205ENST00000588780 MRPL19P49406 292 aaKnown RBP17.87■□□□□ 0.45
CAPNS1-205ENST00000588780 MALLQ13021 153 aa17.87■□□□□ 0.45
CAPNS1-205ENST00000588780 LY6EQ16553 131 aa17.87■□□□□ 0.45
CAPNS1-205ENST00000588780 ZBTB37Q5TC79 503 aa17.87■□□□□ 0.45
CAPNS1-205ENST00000588780 LRRC75AQ8NAA5 344 aa17.87■□□□□ 0.45
CAPNS1-205ENST00000588780 LRRC8CQ8TDW0 803 aa17.87■□□□□ 0.45
CAPNS1-205ENST00000588780 MMP28Q9H239 520 aa17.87■□□□□ 0.45
CAPNS1-205ENST00000588780 C1orf123Q9NWV4 160 aa17.87■□□□□ 0.45
CAPNS1-205ENST00000588780 BAG5Q9UL15 447 aa17.87■□□□□ 0.45
CAPNS1-205ENST00000588780 NOP16Q9Y3C1 178 aaKnown RBP17.87■□□□□ 0.45
CAPNS1-205ENST00000588780 TEX13CA0A0J9YWL9 993 aa17.86■□□□□ 0.45
CAPNS1-205ENST00000588780 TMEM120BA0PK00 339 aa17.86■□□□□ 0.45
CAPNS1-205ENST00000588780 H3BUX3 64 aa17.86■□□□□ 0.45
CAPNS1-205ENST00000588780 SLC16A7O60669 478 aa17.86■□□□□ 0.45
CAPNS1-205ENST00000588780 CTLA4P16410 223 aa17.86■□□□□ 0.45
CAPNS1-205ENST00000588780 CA6P23280 308 aa17.86■□□□□ 0.45
CAPNS1-205ENST00000588780 OR1E2P47887 323 aa17.86■□□□□ 0.45
CAPNS1-205ENST00000588780 LSM6P62312 80 aaKnown RBP17.86■□□□□ 0.45
CAPNS1-205ENST00000588780 CALHM3Q86XJ0 350 aa17.86■□□□□ 0.45
CAPNS1-205ENST00000588780 GLB1L2Q8IW92 636 aa17.86■□□□□ 0.45
CAPNS1-205ENST00000588780 OR4F17Q8NGA8 305 aa17.86■□□□□ 0.45
CAPNS1-205ENST00000588780 OR10A6Q8NH74 314 aa17.86■□□□□ 0.45
CAPNS1-205ENST00000588780 PPP1R35Q8TAP8 253 aa17.86■□□□□ 0.45
CAPNS1-205ENST00000588780 SLCO4A1Q96BD0 722 aa17.86■□□□□ 0.45
CAPNS1-205ENST00000588780 OR4F4Q96R69 305 aa17.86■□□□□ 0.45
CAPNS1-205ENST00000588780 ATPIF1Q9UII2 106 aa17.86■□□□□ 0.45
CAPNS1-205ENST00000588780 RPS6KA6Q9UK32 745 aa17.86■□□□□ 0.45
CAPNS1-205ENST00000588780 AURKCQ9UQB9 309 aa17.86■□□□□ 0.45
CAPNS1-205ENST00000588780 COA3Q9Y2R0 106 aaPredicted RBP17.86■□□□□ 0.45
CAPNS1-205ENST00000588780 ADAM18Q9Y3Q7 739 aa17.86■□□□□ 0.45
CAPNS1-205ENST00000588780 IGHV3OR15-7A0A075B7D8 119 aa17.85■□□□□ 0.45
CAPNS1-205ENST00000588780 EFCAB9A8MZ26 197 aa17.85■□□□□ 0.45
CAPNS1-205ENST00000588780 FBXO24O75426 580 aa17.85■□□□□ 0.45
CAPNS1-205ENST00000588780 KHDRBS3O75525 346 aaKnown RBP17.85■□□□□ 0.45
CAPNS1-205ENST00000588780 GRPP07492 148 aa17.85■□□□□ 0.45
CAPNS1-205ENST00000588780 IFNA8P32881 189 aa17.85■□□□□ 0.45
CAPNS1-205ENST00000588780 KIR2DS4P43632 304 aa17.85■□□□□ 0.45
CAPNS1-205ENST00000588780 KLRD1Q13241 179 aa17.85■□□□□ 0.45
CAPNS1-205ENST00000588780 GK2Q14410 553 aaPredicted RBP17.85■□□□□ 0.45
CAPNS1-205ENST00000588780 CCBE1Q6UXH8 406 aaPredicted RBP17.85■□□□□ 0.45
CAPNS1-205ENST00000588780 PGAP1Q75T13 922 aa17.85■□□□□ 0.45
CAPNS1-205ENST00000588780 PNKDQ8N490 385 aa17.85■□□□□ 0.45
CAPNS1-205ENST00000588780 GJC3Q8NFK1 279 aa17.85■□□□□ 0.45
CAPNS1-205ENST00000588780 OR13C2Q8NGS9 318 aa17.85■□□□□ 0.45
CAPNS1-205ENST00000588780 Q96M85 177 aa17.85■□□□□ 0.45
CAPNS1-205ENST00000588780 ZNF570Q96NI8 536 aa17.85■□□□□ 0.45
CAPNS1-205ENST00000588780 WWC2-AS2Q96NR7 200 aa17.85■□□□□ 0.45
CAPNS1-205ENST00000588780 CGREF1Q99674 301 aa17.85■□□□□ 0.45
CAPNS1-205ENST00000588780 ADAT1Q9BUB4 502 aaKnown RBP17.85■□□□□ 0.45
CAPNS1-205ENST00000588780 HDHD2Q9H0R4 259 aa17.85■□□□□ 0.45
CAPNS1-205ENST00000588780 A0A1B0GWJ7 208 aa17.84■□□□□ 0.45
CAPNS1-205ENST00000588780 PRSS37A4D1T9 235 aa17.84■□□□□ 0.45
CAPNS1-205ENST00000588780 SAA4P35542 130 aa17.84■□□□□ 0.45
CAPNS1-205ENST00000588780 SLC9A3P48764 834 aa17.84■□□□□ 0.45
CAPNS1-205ENST00000588780 DLX1P56177 255 aa17.84■□□□□ 0.45
CAPNS1-205ENST00000588780 ST3GAL3Q11203 375 aa17.84■□□□□ 0.45
CAPNS1-205ENST00000588780 C11orf91Q3C1V1 193 aa17.84■□□□□ 0.45
CAPNS1-205ENST00000588780 MRPL21Q7Z2W9 205 aaKnown RBP17.84■□□□□ 0.45
CAPNS1-205ENST00000588780 FAM90A1Q86YD7 464 aa17.84■□□□□ 0.45
CAPNS1-205ENST00000588780 COQ7Q99807 217 aa17.84■□□□□ 0.45
CAPNS1-205ENST00000588780 FAM234AQ9H0X4 552 aa17.84■□□□□ 0.45
CAPNS1-205ENST00000588780 NKIRAS1Q9NYS0 192 aa17.84■□□□□ 0.45
CAPNS1-205ENST00000588780 HTR3EA5X5Y0 456 aa17.83■□□□□ 0.44
CAPNS1-205ENST00000588780 F5H5K5 113 aa17.83■□□□□ 0.44
CAPNS1-205ENST00000588780 LCATP04180 440 aa17.83■□□□□ 0.44
CAPNS1-205ENST00000588780 CD33P20138 364 aa17.83■□□□□ 0.44
CAPNS1-205ENST00000588780 ECH1Q13011 328 aa17.83■□□□□ 0.44
CAPNS1-205ENST00000588780 VMACQ2NL98 169 aa17.83■□□□□ 0.44
CAPNS1-205ENST00000588780 MESTQ5EB52 335 aa17.83■□□□□ 0.44
CAPNS1-205ENST00000588780 METAP1DQ6UB28 335 aaPredicted RBP17.83■□□□□ 0.44
CAPNS1-205ENST00000588780 ZNF826PQ6ZT77 177 aa17.83■□□□□ 0.44
CAPNS1-205ENST00000588780 NRMQ8IXM6 262 aa17.83■□□□□ 0.44
CAPNS1-205ENST00000588780 FGFRL1Q8N441 504 aa17.83■□□□□ 0.44
CAPNS1-205ENST00000588780 NKX3-1Q99801 234 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms