RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.58□□□□□ -0.4
IFT20-216ENST00000588477 A4GNTQ9UNA3 340 aa12.58□□□□□ -0.4
IFT20-216ENST00000588477 POLR1DQ9Y2S0 133 aa12.58□□□□□ -0.4
IFT20-216ENST00000588477 CAB39Q9Y376 341 aaPredicted RBP12.58□□□□□ -0.4
IFT20-216ENST00000588477 TRAV38-1A0A0B4J264 116 aa12.57□□□□□ -0.4
IFT20-216ENST00000588477 DVL1O14640 695 aa12.57□□□□□ -0.4
IFT20-216ENST00000588477 IMPA2O14732 288 aa12.57□□□□□ -0.4
IFT20-216ENST00000588477 GPR37O15354 613 aa12.57□□□□□ -0.4
IFT20-216ENST00000588477 KHDRBS3O75525 346 aaKnown RBP12.57□□□□□ -0.4
IFT20-216ENST00000588477 GYPAP02724 150 aa12.57□□□□□ -0.4
IFT20-216ENST00000588477 CD14P08571 375 aa12.57□□□□□ -0.4
IFT20-216ENST00000588477 YAP1P46937 504 aaKnown RBP12.57□□□□□ -0.4
IFT20-216ENST00000588477 GK2Q14410 553 aaPredicted RBP12.57□□□□□ -0.4
IFT20-216ENST00000588477 OR8G1Q15617 311 aa12.57□□□□□ -0.4
IFT20-216ENST00000588477 NANOGP8Q6NSW7 305 aa12.57□□□□□ -0.4
IFT20-216ENST00000588477 GALNT4Q8N4A0 578 aa12.57□□□□□ -0.4
IFT20-216ENST00000588477 C11orf44Q8N8P7 122 aa12.57□□□□□ -0.4
IFT20-216ENST00000588477 GJC3Q8NFK1 279 aa12.57□□□□□ -0.4
IFT20-216ENST00000588477 PPP1R14AQ96A00 147 aa12.57□□□□□ -0.4
IFT20-216ENST00000588477 SLCO4A1Q96BD0 722 aa12.57□□□□□ -0.4
IFT20-216ENST00000588477 PRRC1Q96M27 445 aa12.57□□□□□ -0.4
IFT20-216ENST00000588477 ZNF583Q96ND8 569 aa12.57□□□□□ -0.4
IFT20-216ENST00000588477 COQ7Q99807 217 aa12.57□□□□□ -0.4
IFT20-216ENST00000588477 SYT4Q9H2B2 425 aa12.57□□□□□ -0.4
IFT20-216ENST00000588477 CNTD2Q9H8S5 307 aa12.57□□□□□ -0.4
IFT20-216ENST00000588477 RHCGQ9UBD6 479 aa12.57□□□□□ -0.4
IFT20-216ENST00000588477 FBLN5Q9UBX5 448 aa12.57□□□□□ -0.4
IFT20-216ENST00000588477 RPS6KA6Q9UK32 745 aa12.57□□□□□ -0.4
IFT20-216ENST00000588477 COL7A1Q02388 2944 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 A0A1B0GVI7 797 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 OOEPA6NGQ2 149 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 NDUFA2O43678 99 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 CA6P23280 308 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 IFNA8P32881 189 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 HIST1H3AP68431 136 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 DBPQ10586 325 aaPredicted RBP12.56□□□□□ -0.4
IFT20-216ENST00000588477 POU4F2Q12837 409 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 MEP1BQ16820 701 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 RSPO1Q2MKA7 263 aaPredicted RBP12.56□□□□□ -0.4
IFT20-216ENST00000588477 CDONQ4KMG0 1287 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 OXLD1Q5BKU9 147 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 HIST2H3PS2Q5TEC6 136 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 COLCA1Q6ZS62 124 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 HIST2H3AQ71DI3 136 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 FAM122BQ7Z309 247 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.56□□□□□ -0.4
IFT20-216ENST00000588477 NAA40Q86UY6 237 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 NPRL2Q8WTW4 380 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 SPRYD4Q8WW59 207 aaPredicted RBP12.56□□□□□ -0.4
IFT20-216ENST00000588477 ST8SIA4Q92187 359 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 TPD52L3Q96J77 140 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 HDHD2Q9H0R4 259 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 PPA2Q9H2U2 334 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 TRIM36Q9NQ86 728 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 FOXJ3Q9UPW0 622 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 SIGLEC9Q9Y336 463 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 KPTNQ9Y664 436 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 LHFPL6Q9Y693 200 aa12.56□□□□□ -0.4
IFT20-216ENST00000588477 A0A1W2PRD5 423 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 A0A1W2PRF3 423 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 A0A1W2PRM7 423 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 F5H5K5 113 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 CDC42EP2O14613 210 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 ECDO95905 644 aaPredicted RBP12.55□□□□□ -0.4
IFT20-216ENST00000588477 IFNA14P01570 189 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 ZNF26P17031 533 aaPredicted RBP12.55□□□□□ -0.4
IFT20-216ENST00000588477 GABRA5P31644 462 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 GPR4P46093 362 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 CENPAP49450 140 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 PRB3Q04118 309 aaPredicted RBP12.55□□□□□ -0.4
IFT20-216ENST00000588477 KRR1Q13601 381 aaKnown RBP12.55□□□□□ -0.4
IFT20-216ENST00000588477 KCNMB1Q16558 191 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 ZBED5Q49AG3 693 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 LRRC23Q53EV4 343 aaPredicted RBP12.55□□□□□ -0.4
IFT20-216ENST00000588477 CYBRD1Q53TN4 286 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 RABL3Q5HYI8 236 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 CORO6Q6QEF8 472 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 PGAP1Q75T13 922 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 CALHM3Q86XJ0 350 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 FGFRL1Q8N441 504 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 SGCDQ92629 289 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 ITPKCQ96DU7 683 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 NUAK2Q9H093 628 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 NMNAT1Q9HAN9 279 aaPredicted RBP12.55□□□□□ -0.4
IFT20-216ENST00000588477 SIRT7Q9NRC8 400 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 ONECUT1Q9UBC0 465 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 DNAJB11Q9UBS4 358 aa12.55□□□□□ -0.4
IFT20-216ENST00000588477 RPUSD1Q9UJJ7 312 aaKnown RBP12.55□□□□□ -0.4
IFT20-216ENST00000588477 J3KTA2 159 aa12.54□□□□□ -0.4
IFT20-216ENST00000588477 ACSM4P0C7M7 580 aa12.54□□□□□ -0.4
IFT20-216ENST00000588477 DLX1P56177 255 aa12.54□□□□□ -0.4
IFT20-216ENST00000588477 MALLQ13021 153 aa12.54□□□□□ -0.4
IFT20-216ENST00000588477 CYLC2Q14093 348 aaPredicted RBP12.54□□□□□ -0.4
IFT20-216ENST00000588477 TRAM2Q15035 370 aa12.54□□□□□ -0.4
IFT20-216ENST00000588477 VAX1Q5SQQ9 334 aa12.54□□□□□ -0.4
IFT20-216ENST00000588477 TBPL2Q6SJ96 375 aa12.54□□□□□ -0.4
IFT20-216ENST00000588477 C1orf122Q6ZSJ8 110 aa12.54□□□□□ -0.4
IFT20-216ENST00000588477 ZNF826PQ6ZT77 177 aa12.54□□□□□ -0.4
IFT20-216ENST00000588477 FAM90A1Q86YD7 464 aa12.54□□□□□ -0.4
IFT20-216ENST00000588477 RNF113BQ8IZP6 322 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms