RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 HLA-DPB1P04440 258 aa12.96□□□□□ -0.33
NFIX-208ENST00000587260 FGF9P31371 208 aaPredicted RBP12.96□□□□□ -0.33
NFIX-208ENST00000587260 KIR3DL2P43630 455 aa12.96□□□□□ -0.33
NFIX-208ENST00000587260 ZNF83P51522 516 aa12.96□□□□□ -0.33
NFIX-208ENST00000587260 IDH3GP51553 393 aaPredicted RBP12.96□□□□□ -0.33
NFIX-208ENST00000587260 RPS25P62851 125 aaKnown RBP12.96□□□□□ -0.33
NFIX-208ENST00000587260 SORDQ00796 357 aa12.96□□□□□ -0.33
NFIX-208ENST00000587260 MFGE8Q08431 387 aaPredicted RBP12.96□□□□□ -0.33
NFIX-208ENST00000587260 CTF1Q16619 201 aa12.96□□□□□ -0.33
NFIX-208ENST00000587260 WDR38Q5JTN6 314 aa12.96□□□□□ -0.33
NFIX-208ENST00000587260 DRAM2Q6UX65 266 aa12.96□□□□□ -0.33
NFIX-208ENST00000587260 WFDC8Q8IUA0 241 aa12.96□□□□□ -0.33
NFIX-208ENST00000587260 FAM169BQ8N8A8 192 aa12.96□□□□□ -0.33
NFIX-208ENST00000587260 LINC01560Q8TB33 94 aa12.96□□□□□ -0.33
NFIX-208ENST00000587260 ISOC1Q96CN7 298 aa12.96□□□□□ -0.33
NFIX-208ENST00000587260 MUCL1Q96DR8 90 aa12.96□□□□□ -0.33
NFIX-208ENST00000587260 WFIKKN1Q96NZ8 548 aa12.96□□□□□ -0.33
NFIX-208ENST00000587260 OR10A4Q9H209 315 aa12.96□□□□□ -0.33
NFIX-208ENST00000587260 MOV10Q9HCE1 1003 aaKnown RBP12.96□□□□□ -0.33
NFIX-208ENST00000587260 NUFIP1Q9UHK0 495 aaKnown RBP12.96□□□□□ -0.33
NFIX-208ENST00000587260 OR52A1Q9UKL2 312 aa12.96□□□□□ -0.33
NFIX-208ENST00000587260 ZNF281Q9Y2X9 895 aa12.96□□□□□ -0.33
NFIX-208ENST00000587260 USP9XQ93008 2570 aaPredicted RBP12.96□□□□□ -0.34
NFIX-208ENST00000587260 WIPF3A6NGB9 483 aa12.95□□□□□ -0.34
NFIX-208ENST00000587260 TRIM64BA6NI03 449 aa12.95□□□□□ -0.34
NFIX-208ENST00000587260 AIREO43918 545 aa12.95□□□□□ -0.34
NFIX-208ENST00000587260 GPX5O75715 221 aa12.95□□□□□ -0.34
NFIX-208ENST00000587260 SC5DO75845 299 aa12.95□□□□□ -0.34
NFIX-208ENST00000587260 ISG15P05161 165 aa12.95□□□□□ -0.34
NFIX-208ENST00000587260 THBDP07204 575 aa12.95□□□□□ -0.34
NFIX-208ENST00000587260 CBR1P16152 277 aa12.95□□□□□ -0.34
NFIX-208ENST00000587260 APEX1P27695 318 aaKnown RBP12.95□□□□□ -0.34
NFIX-208ENST00000587260 HTR5AP47898 357 aa12.95□□□□□ -0.34
NFIX-208ENST00000587260 CX3CR1P49238 355 aa12.95□□□□□ -0.34
NFIX-208ENST00000587260 TPTEP56180 551 aa12.95□□□□□ -0.34
NFIX-208ENST00000587260 RPS11P62280 158 aaKnown RBP eCLIP12.95□□□□□ -0.34
NFIX-208ENST00000587260 PLP2Q04941 152 aa12.95□□□□□ -0.34
NFIX-208ENST00000587260 SLC3A1Q07837 685 aa12.95□□□□□ -0.34
NFIX-208ENST00000587260 YIF1BQ5BJH7 314 aa12.95□□□□□ -0.34
NFIX-208ENST00000587260 ZNF584Q8IVC4 421 aa12.95□□□□□ -0.34
NFIX-208ENST00000587260 ELMOD2Q8IZ81 293 aa12.95□□□□□ -0.34
NFIX-208ENST00000587260 SLC7A6Q92536 515 aa12.95□□□□□ -0.34
NFIX-208ENST00000587260 DCLRE1CQ96SD1 692 aaKnown RBP12.95□□□□□ -0.34
NFIX-208ENST00000587260 PDCD1LG2Q9BQ51 273 aa12.95□□□□□ -0.34
NFIX-208ENST00000587260 OR51E2Q9H255 320 aa12.95□□□□□ -0.34
NFIX-208ENST00000587260 NPAP1Q9NZP6 1156 aa12.95□□□□□ -0.34
NFIX-208ENST00000587260 TUBAL3A6NHL2 446 aa12.94□□□□□ -0.34
NFIX-208ENST00000587260 M0R135 149 aa12.94□□□□□ -0.34
NFIX-208ENST00000587260 M0R1B8 84 aa12.94□□□□□ -0.34
NFIX-208ENST00000587260 IGKV3-15P01624 115 aa12.94□□□□□ -0.34
NFIX-208ENST00000587260 SERPINA5P05154 406 aa12.94□□□□□ -0.34
NFIX-208ENST00000587260 ACSM4P0C7M7 580 aa12.94□□□□□ -0.34
NFIX-208ENST00000587260 CCL2P13500 99 aa12.94□□□□□ -0.34
NFIX-208ENST00000587260 PPP3CBP16298 524 aa12.94□□□□□ -0.34
NFIX-208ENST00000587260 PRKXP51817 358 aa12.94□□□□□ -0.34
NFIX-208ENST00000587260 ZNF121P58317 390 aaPredicted RBP12.94□□□□□ -0.34
NFIX-208ENST00000587260 GALK2Q01415 458 aa12.94□□□□□ -0.34
NFIX-208ENST00000587260 FABP5Q01469 135 aa12.94□□□□□ -0.34
NFIX-208ENST00000587260 SEZ6L2Q6UXD5 910 aa12.94□□□□□ -0.34
NFIX-208ENST00000587260 ZNF704Q6ZNC4 412 aaPredicted RBP12.94□□□□□ -0.34
NFIX-208ENST00000587260 ZNF283Q8N7M2 679 aa12.94□□□□□ -0.34
NFIX-208ENST00000587260 OR5AK2Q8NH90 309 aa12.94□□□□□ -0.34
NFIX-208ENST00000587260 ABHD4Q8TB40 342 aa12.94□□□□□ -0.34
NFIX-208ENST00000587260 TMEM203Q969S6 136 aa12.94□□□□□ -0.34
NFIX-208ENST00000587260 ZNF799Q96GE5 643 aa12.94□□□□□ -0.34
NFIX-208ENST00000587260 PBOV1Q9GZY1 135 aa12.94□□□□□ -0.34
NFIX-208ENST00000587260 SLC22A13Q9Y226 551 aa12.94□□□□□ -0.34
NFIX-208ENST00000587260 PRR14LQ5THK1 2151 aa12.94□□□□□ -0.34
NFIX-208ENST00000587260 ADGRG4Q8IZF6 3080 aa12.94□□□□□ -0.34
NFIX-208ENST00000587260 LOC100509620A0A075B734 347 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 IQCMA0A1B0GVH7 501 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 A1L4Q6 167 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 F5H5K5 113 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 H3BMQ9 156 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 SERPINA3P01011 423 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 DBHP09172 617 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 ZNF14P17017 642 aaPredicted RBP12.93□□□□□ -0.34
NFIX-208ENST00000587260 CCNOP22674 350 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 STOMP27105 288 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 DOPEY1Q5JWR5 2465 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 BCL2L15Q5TBC7 163 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 UNQ9370/PRO34162Q6UXP9 181 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 TMEM91Q6ZNR0 172 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 SSX8Q7RTT4 187 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 PHYHIPQ92561 330 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 RPL3LQ92901 407 aaKnown RBP12.93□□□□□ -0.34
NFIX-208ENST00000587260 C12orf43Q96C57 262 aaKnown RBP12.93□□□□□ -0.34
NFIX-208ENST00000587260 POM121L2Q96KW2 1035 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 CHCHD6Q9BRQ6 235 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 TMED9Q9BVK6 235 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 COMMD4Q9H0A8 199 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 SP140LQ9H930 580 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 CRNNQ9UBG3 495 aaPredicted RBP12.93□□□□□ -0.34
NFIX-208ENST00000587260 NDRG3Q9UGV2 375 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 SSR3Q9UNL2 185 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 SPTBN1Q01082 2364 aaKnown RBP12.93□□□□□ -0.34
NFIX-208ENST00000587260 IGHV1-18A0A0C4DH31 117 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 CLEC18AA5D8T8 446 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 CCDC160A6NGH7 325 aa12.93□□□□□ -0.34
NFIX-208ENST00000587260 PRSS44E7EML9 344 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms