RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 HTRA1Q92743 480 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 BORCS5Q969J3 196 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 FOXRED1Q96CU9 486 aaPredicted RBP5.43□□□□□ -1.54
LIG3-206ENST00000586058 DERL3Q96Q80 235 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 OR2H1Q9GZK4 316 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 PIGMQ9H3S5 423 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 RNF167Q9H6Y7 350 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 CDH20Q9HBT6 801 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 NOX4Q9NPH5 578 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 OBP2BQ9NPH6 170 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 FAM206AQ9NX38 181 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 EIF3KQ9UBQ5 218 aaKnown RBP5.43□□□□□ -1.54
LIG3-206ENST00000586058 PRSS50Q9UI38 385 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 FOXJ3Q9UPW0 622 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 SLC22A13Q9Y226 551 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 AMDHD2Q9Y303 409 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 CMAHPQ9Y471 501 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 FREM1Q5H8C1 2179 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 INTS1Q8N201 2190 aaKnown RBP5.43□□□□□ -1.54
LIG3-206ENST00000586058 CACNA1CQ13936 2221 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 DMXL1Q9Y485 3027 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 PTPRZ1P23471 2315 aaPredicted RBP5.42□□□□□ -1.54
LIG3-206ENST00000586058 CACNA1GO43497 2377 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 A0A096LPE4 126 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 TRBV5-5A0A0J9YX44 114 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 A0A0U1RQV5 110 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 A0A1W2PPZ6 126 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 ANKRD61A6NGH8 418 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 DHRS7CA6NNS2 312 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 NOTOA8MTQ0 251 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 EEF1E1-BLOC1S5C9J1V9 151 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 J3QW42 95 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 K7EM74 188 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 P2RY10O00398 339 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 LRRTM2O43300 516 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 EEF1E1O43324 174 aaKnown RBP5.42□□□□□ -1.54
LIG3-206ENST00000586058 SYNGR3O43761 229 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 SC5DO75845 299 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 TTRP02766 147 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 LCATP04180 440 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 MAS1P04201 325 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 SERPINA5P05154 406 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 HCKP08631 526 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 PSKH1P11801 424 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 SRMP19623 302 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 RAB3AP20336 220 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 CTSSP25774 331 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 STOMP27105 288 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 RPS19P39019 145 aaKnown RBP5.42□□□□□ -1.54
LIG3-206ENST00000586058 KIR3DL2P43630 455 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 RAB1AP62820 205 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 HIST1H3AP68431 136 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 ZNF45Q02386 682 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 P2RY6Q15077 328 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 FAM189A2Q15884 450 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 SOWAHCQ53LP3 525 aaPredicted RBP5.42□□□□□ -1.54
LIG3-206ENST00000586058 PABPC1L2AQ5JQF8 200 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 HIST2H3PS2Q5TEC6 136 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 ZNF774Q6NX45 483 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 PLXDC2Q6UX71 529 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 BAIAP2L2Q6UXY1 529 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 HIST2H3AQ71DI3 136 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 ZNF627Q7L945 461 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 MRPL21Q7Z2W9 205 aaKnown RBP5.42□□□□□ -1.54
LIG3-206ENST00000586058 LRRC28Q86X40 367 aaPredicted RBP5.42□□□□□ -1.54
LIG3-206ENST00000586058 WDFY1Q8IWB7 410 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 SKA3Q8IX90 412 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 PRSS35Q8N3Z0 413 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 OR8B12Q8NGG6 310 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 ZFAND2BQ8WV99 257 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 PP6455Q8WZ26 134 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 ITFG2Q969R8 447 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 APOBEC3DQ96AK3 386 aaPredicted RBP5.42□□□□□ -1.54
LIG3-206ENST00000586058 C10orf35Q96D05 121 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 SNRNP40Q96DI7 357 aaKnown RBP5.42□□□□□ -1.54
LIG3-206ENST00000586058 MUCL1Q96DR8 90 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 FBXO17Q96EF6 278 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 FAM71F1Q96KD3 344 aaPredicted RBP5.42□□□□□ -1.54
LIG3-206ENST00000586058 TECTBQ96PL2 329 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 SORCS2Q96PQ0 1159 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 GPER1Q99527 375 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 S100A13Q99584 98 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 SLX1AQ9BQ83 275 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 SLIRPQ9GZT3 109 aaKnown RBP5.42□□□□□ -1.54
LIG3-206ENST00000586058 PALMDQ9NP74 551 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 G6PC2Q9NQR9 355 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 COQ3Q9NZJ6 369 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 ABRACLQ9P1F3 81 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 COMMD3Q9UBI1 195 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 RABL2AQ9UBK7 228 aaPredicted RBP5.42□□□□□ -1.54
LIG3-206ENST00000586058 DAPK2Q9UIK4 370 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 SH3BGRL2Q9UJC5 107 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 RABL2BQ9UNT1 228 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 SIRT4Q9Y6E7 314 aaPredicted RBP5.42□□□□□ -1.54
LIG3-206ENST00000586058 V9GY05 133 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 ZGRF1Q86YA3 2104 aa5.42□□□□□ -1.54
LIG3-206ENST00000586058 TRGV8A0A0C4DH27 118 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 A0A1W2PPK0 400 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 SMIM30A4D0T7 59 aa5.41□□□□□ -1.54
LIG3-206ENST00000586058 C5orf49A4QMS7 147 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms