RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 N6AMT1Q9Y5N5 214 aa12.56□□□□□ -0.4
SCAMP4-209ENST00000585335 TMEM269A0A1B0GVZ9 245 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 A0A1W2PPW3 197 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 LOC110117498-PIK3R3F6TDL0 507 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 SLC1A7O00341 560 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 TBX1O43435 398 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 XRCC2O43543 280 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 XPNPEP2O43895 674 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 ATE1O95260 518 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 NGFP01138 241 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 MT-ND5P03915 603 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 RAF1P04049 648 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 CCDC159P0C7I6 412 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 CFL1P23528 166 aaKnown RBP12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 EVX1P49640 407 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 ZNF85Q03923 595 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 ST3GAL4Q11206 333 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 EFNB3Q15768 340 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 TIGD6Q17RP2 521 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 RBM48Q5RL73 367 aaKnown RBP12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 SPATA46Q5T0L3 261 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 MBNL2Q5VZF2 373 aaKnown RBP12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 PAMR1Q6UXH9 720 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 TMPRSS11AQ6ZMR5 421 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 COLCA1Q6ZS62 124 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 AHSA2Q719I0 299 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 FAM57BQ71RH2 274 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 SSX6Q7RTT6 188 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 MRPL21Q7Z2W9 205 aaKnown RBP12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 RFLNBQ8N5W9 214 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 HAVCR2Q8TDQ0 301 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 PIGTQ969N2 578 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 LURAP1Q96LR2 239 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 ALG8Q9BVK2 526 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 OR2J1Q9GZK6 312 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 BRD7Q9NPI1 651 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 ERVK13-1Q9NX77 482 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 PTTG3PQ9NZH4 202 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 DUSP13Q9UII6 198 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 MYRFQ9Y2G1 1151 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 STARD10Q9Y365 291 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 ABCA4P78363 2273 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 HECTD1Q9ULT8 2610 aa12.55□□□□□ -0.4
SCAMP4-209ENST00000585335 SLC2A1P11166 492 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 ZNF250P15622 560 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 SELEP16581 610 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 DNASE1P24855 282 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 ERVS71-1P61550 626 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 MRPL28Q13084 256 aaKnown RBP12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 NKPD1Q17RQ9 610 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 CDONQ4KMG0 1287 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 LAIR2Q6ISS4 152 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 LHFPL3Q86UP9 236 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 DTX2Q86UW9 622 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 SYS1Q8N2H4 156 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 ZNF786Q8N393 782 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 KLF14Q8TD94 323 aaPredicted RBP12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 GGHQ92820 318 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 MARS2Q96GW9 593 aaKnown RBP12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 RGCCQ9H4X1 137 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 CXorf56Q9H5V9 222 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 DYNLRB1Q9NP97 96 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 MRM2Q9UI43 246 aaKnown RBP12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 ZNF391Q9UJN7 358 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 FZR1Q9UM11 496 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 GTF2A1LQ9UNN4 478 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 LAMP3Q9UQV4 416 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 R4GMQ9 66 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 PMF1-BGLAPU3KQ54 211 aa12.54□□□□□ -0.4
SCAMP4-209ENST00000585335 ASH1LQ9NR48 2969 aaKnown RBP12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 PRR32B1ATL7 298 aa12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 PTGES3LE9PB15 166 aa12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 J3QLW9 94 aa12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 TIMM8AO60220 97 aaPredicted RBP12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 RPP14O95059 124 aaKnown RBP12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 ERCC1P07992 297 aaPredicted RBP12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 DANCRP0C864 163 aa12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 RAC2P15153 192 aa12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 ZNF19P17023 458 aa12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 MMP16P51512 607 aa12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 KRTAP10-9P60411 292 aa12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 TP53I3Q53FA7 332 aa12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 ZMAT1Q5H9K5 638 aa12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 BCL2L15Q5TBC7 163 aa12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 FBXW12Q6X9E4 464 aa12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 PGAP1Q75T13 922 aa12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 NAA40Q86UY6 237 aa12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 KLHL36Q8N4N3 616 aa12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 C4orf36Q96KX1 117 aa12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 SYT3Q9BQG1 590 aa12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 TRAF4Q9BUZ4 470 aaPredicted RBP12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 MRPL37Q9BZE1 423 aaKnown RBP12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 CGGBP1Q9UFW8 167 aaPredicted RBP12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 ST6GALNAC2Q9UJ37 374 aa12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 SNX5Q9Y5X3 404 aa12.53□□□□□ -0.4
SCAMP4-209ENST00000585335 PLSCR5A0PG75 271 aa12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 M0R233 179 aa12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 MYL12BO14950 172 aa12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 MAGEB4O15481 346 aaPredicted RBP12.52□□□□□ -0.41
SCAMP4-209ENST00000585335 IGHV3-13P01766 116 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms