RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 CMTM4Q8IZR5 234 aa11.03□□□□□ -0.64
COPS3-218ENST00000584216 C19orf18Q8NEA5 215 aa11.03□□□□□ -0.64
COPS3-218ENST00000584216 OR5R1Q8NH85 324 aa11.03□□□□□ -0.64
COPS3-218ENST00000584216 MRAPQ8TCY5 172 aa11.03□□□□□ -0.64
COPS3-218ENST00000584216 SPRYD4Q8WW59 207 aaPredicted RBP11.03□□□□□ -0.64
COPS3-218ENST00000584216 LZICQ8WZA0 190 aa11.03□□□□□ -0.64
COPS3-218ENST00000584216 PARD6BQ9BYG5 372 aa11.03□□□□□ -0.64
COPS3-218ENST00000584216 RERGLQ9H628 205 aa11.03□□□□□ -0.64
COPS3-218ENST00000584216 CNTD2Q9H8S5 307 aa11.03□□□□□ -0.64
COPS3-218ENST00000584216 UFSP2Q9NUQ7 469 aa11.03□□□□□ -0.64
COPS3-218ENST00000584216 AURKCQ9UQB9 309 aa11.03□□□□□ -0.64
COPS3-218ENST00000584216 ADAM18Q9Y3Q7 739 aa11.03□□□□□ -0.64
COPS3-218ENST00000584216 OOEPA6NGQ2 149 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 PAHP00439 452 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 GABRA5P31644 462 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 GZMMP51124 257 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 LOXL3P58215 753 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 MZT1Q08AG7 82 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 COX10Q12887 443 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 KRR1Q13601 381 aaKnown RBP11.02□□□□□ -0.65
COPS3-218ENST00000584216 TRAM2Q15035 370 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 OR8G1Q15617 311 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 KCNMB1Q16558 191 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 PRAMEF6Q5VXH4 476 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 GPR139Q6DWJ6 353 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 SFRP4Q6FHJ7 346 aaPredicted RBP11.02□□□□□ -0.65
COPS3-218ENST00000584216 DNM1P34Q6PK57 102 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 METAP1DQ6UB28 335 aaPredicted RBP11.02□□□□□ -0.65
COPS3-218ENST00000584216 COLCA1Q6ZS62 124 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 PGAP1Q75T13 922 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 BTN2A1Q7KYR7 527 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 ADCK1Q86TW2 530 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 DTX3Q8N9I9 347 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 OR13C2Q8NGS9 318 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 STON2Q8WXE9 905 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 Q96M85 177 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 DMRTB1Q96MA1 342 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 FNDC11Q9BVV2 318 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 SYT4Q9H2B2 425 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 WDR76Q9H967 626 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 NMNAT1Q9HAN9 279 aaPredicted RBP11.02□□□□□ -0.65
COPS3-218ENST00000584216 ZNRD1Q9P1U0 126 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 FBLN5Q9UBX5 448 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 A4GNTQ9UNA3 340 aa11.02□□□□□ -0.65
COPS3-218ENST00000584216 COA3Q9Y2R0 106 aaPredicted RBP11.02□□□□□ -0.65
COPS3-218ENST00000584216 RNASEK-C17orf49H0YIS7 233 aa11.01□□□□□ -0.65
COPS3-218ENST00000584216 GPR37O15354 613 aa11.01□□□□□ -0.65
COPS3-218ENST00000584216 XPNPEP2O43895 674 aa11.01□□□□□ -0.65
COPS3-218ENST00000584216 GMDSO60547 372 aa11.01□□□□□ -0.65
COPS3-218ENST00000584216 SDHAP31040 664 aa11.01□□□□□ -0.65
COPS3-218ENST00000584216 ECH1Q13011 328 aa11.01□□□□□ -0.65
COPS3-218ENST00000584216 FHL1Q13642 323 aa11.01□□□□□ -0.65
COPS3-218ENST00000584216 GK2Q14410 553 aaPredicted RBP11.01□□□□□ -0.65
COPS3-218ENST00000584216 MPPED2Q15777 294 aa11.01□□□□□ -0.65
COPS3-218ENST00000584216 ZBED5Q49AG3 693 aa11.01□□□□□ -0.65
COPS3-218ENST00000584216 LRRC23Q53EV4 343 aaPredicted RBP11.01□□□□□ -0.65
COPS3-218ENST00000584216 CYBRD1Q53TN4 286 aa11.01□□□□□ -0.65
COPS3-218ENST00000584216 NANOGP8Q6NSW7 305 aa11.01□□□□□ -0.65
COPS3-218ENST00000584216 ZNF730Q6ZMV8 503 aa11.01□□□□□ -0.65
COPS3-218ENST00000584216 RRM2BQ7LG56 351 aa11.01□□□□□ -0.65
COPS3-218ENST00000584216 MRPL21Q7Z2W9 205 aaKnown RBP11.01□□□□□ -0.65
COPS3-218ENST00000584216 FAM122BQ7Z309 247 aa11.01□□□□□ -0.65
COPS3-218ENST00000584216 VMO1Q7Z5L0 202 aa11.01□□□□□ -0.65
COPS3-218ENST00000584216 PDZD9Q8IXQ8 264 aa11.01□□□□□ -0.65
COPS3-218ENST00000584216 OFCC1Q8IZS5 231 aa11.01□□□□□ -0.65
COPS3-218ENST00000584216 PIP4P2Q8N4L2 257 aa11.01□□□□□ -0.65
COPS3-218ENST00000584216 BOLLQ8N9W6 283 aaKnown RBP11.01□□□□□ -0.65
COPS3-218ENST00000584216 OR8J3Q8NGG0 315 aa11.01□□□□□ -0.65
COPS3-218ENST00000584216 ACOT11Q8WXI4 607 aaPredicted RBP11.01□□□□□ -0.65
COPS3-218ENST00000584216 TPD52L3Q96J77 140 aa11.01□□□□□ -0.65
COPS3-218ENST00000584216 ADAT1Q9BUB4 502 aaKnown RBP11.01□□□□□ -0.65
COPS3-218ENST00000584216 SMURF1Q9HCE7 757 aa11.01□□□□□ -0.65
COPS3-218ENST00000584216 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.01□□□□□ -0.65
COPS3-218ENST00000584216 RPUSD1Q9UJJ7 312 aaKnown RBP11.01□□□□□ -0.65
COPS3-218ENST00000584216 V9GYY5 206 aaPredicted RBP11.01□□□□□ -0.65
COPS3-218ENST00000584216 DVL1O14640 695 aa11□□□□□ -0.65
COPS3-218ENST00000584216 OR10H3O60404 316 aa11□□□□□ -0.65
COPS3-218ENST00000584216 PTBP3O95758 552 aaKnown RBP11□□□□□ -0.65
COPS3-218ENST00000584216 PRB2P02812 416 aaPredicted RBP11□□□□□ -0.65
COPS3-218ENST00000584216 IFNW1P05000 195 aa11□□□□□ -0.65
COPS3-218ENST00000584216 CRABP1P29762 137 aa11□□□□□ -0.65
COPS3-218ENST00000584216 HIST1H3AP68431 136 aa11□□□□□ -0.65
COPS3-218ENST00000584216 HIST2H3PS2Q5TEC6 136 aa11□□□□□ -0.65
COPS3-218ENST00000584216 MBOAT2Q6ZWT7 520 aa11□□□□□ -0.65
COPS3-218ENST00000584216 HIST2H3AQ71DI3 136 aa11□□□□□ -0.65
COPS3-218ENST00000584216 CALHM3Q86XJ0 350 aa11□□□□□ -0.65
COPS3-218ENST00000584216 ST8SIA4Q92187 359 aa11□□□□□ -0.65
COPS3-218ENST00000584216 TLCD1Q96CP7 247 aa11□□□□□ -0.65
COPS3-218ENST00000584216 NECAP2Q9NVZ3 263 aa11□□□□□ -0.65
COPS3-218ENST00000584216 VSX1Q9NZR4 365 aaPredicted RBP11□□□□□ -0.65
COPS3-218ENST00000584216 ONECUT1Q9UBC0 465 aa11□□□□□ -0.65
COPS3-218ENST00000584216 KAAG1Q9UBP8 84 aa11□□□□□ -0.65
COPS3-218ENST00000584216 RPS6KA6Q9UK32 745 aa11□□□□□ -0.65
COPS3-218ENST00000584216 TMEM5Q9Y2B1 443 aa11□□□□□ -0.65
COPS3-218ENST00000584216 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.99□□□□□ -0.65
COPS3-218ENST00000584216 F5H5K5 113 aa10.99□□□□□ -0.65
COPS3-218ENST00000584216 NDUFB2O95178 105 aa10.99□□□□□ -0.65
COPS3-218ENST00000584216 NPPAP01160 153 aa10.99□□□□□ -0.65
COPS3-218ENST00000584216 GYPAP02724 150 aa10.99□□□□□ -0.65
COPS3-218ENST00000584216 LCATP04180 440 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms