RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	TMPRSS12	Q86WS5	348 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SLITRK4	Q8IW52	837 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CDRT4	Q8N9R6	151 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	OR4C3	Q8NH37	302 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	OR56B4	Q8NH76	319 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	STT3B	Q8TCJ2	826 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SFT2D1	Q8WV19	159 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	RGP1	Q92546	391 aa	Predicted RBP	10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CNN2	Q99439	309 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	DNAJB12	Q9NXW2	375 aa	Known RBP	10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	IKZF2	Q9UKS7	526 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	TMEM184B	Q9Y519	407 aa	Predicted RBP	10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ENTPD2	Q9Y5L3	495 aa		10.42	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063		A0A0B4J2E0	115 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063		A0A1B0GVI7	797 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063		A0A1B0GX12	115 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	IFNA7	P01567	189 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ATP1B1	P05026	303 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CSN2	P05814	226 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	NPS	P0C0P6	89 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	S1PR1	P21453	382 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	AQP2	P41181	271 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	GATA4	P43694	442 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ARL4D	P49703	201 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CHRFAM7A	Q494W8	412 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	DMRTA1	Q5VZB9	504 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	LEG1	Q6P5S2	330 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	COLCA1	Q6ZS62	124 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SMIM4	Q8WVI0	70 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	PERP	Q96FX8	193 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	KLHL15	Q96M94	604 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	THADA	Q6YHU6	1953 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	LOC100509620	A0A075B734	347 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	IGHV5-51	A0A0C4DH38	117 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	LINC00862	A6NCI5	91 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	TNFSF14	O43557	240 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	TSPAN2	O60636	221 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	S100A8	P05109	93 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CFI	P05156	583 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	THBS1	P07996	1170 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ACSM4	P0C7M7	580 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	EFNB2	P52799	333 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	EMP2	P54851	167 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	TMPRSS11F	Q6ZWK6	438 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SLC35F3	Q8IY50	421 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	RELL2	Q8NC24	303 aa	Predicted RBP	10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CADM4	Q8NFZ8	388 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	OR2I1P	Q8NGU4	316 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	OR5V1	Q9UGF6	321 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	OPN4	Q9UHM6	478 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SCP2D1	Q9UJQ7	156 aa		10.41	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	PLSCR5	A0PG75	271 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CPED1	A4D0V7	1026 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	IFITM5	A6NNB3	132 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	PYCARD-AS1	I3L0S3	204 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	KDM4B	O94953	1096 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CNR1	P21554	472 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	UCP1	P25874	307 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ITPKB	P27987	946 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SLC6A6	P31641	620 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	THBS4	P35443	961 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CEBPG	P53567	150 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	PITPNA	Q00169	270 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	COL28A1	Q2UY09	1125 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ZNF613	Q6PF04	617 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	GLB1L2	Q8IW92	636 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	STPG2	Q8N412	459 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	C19orf47	Q8N9M1	422 aa	Known RBP	10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	HAVCR2	Q8TDQ0	301 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CHST6	Q9GZX3	395 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	TMEM138	Q9NPI0	162 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	MAB21L2	Q9Y586	359 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	TRAV8-7	A0A075B6U6	113 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063		K7ESF4	209 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ARL6IP5	O75915	188 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SPI1	P17947	270 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	ADRA2C	P18825	462 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	CDKN2A	P42771	156 aa	Known RBP	10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	NXPH1	P58417	271 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	USF2	Q15853	346 aa	Predicted RBP	10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	PHYHD1	Q5SRE7	291 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	DCAF12L2	Q5VW00	463 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	B3GNTL1	Q67FW5	361 aa	Predicted RBP	10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	LPCAT3	Q6P1A2	487 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	FAHD2B	Q6P2I3	314 aa	Predicted RBP	10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	PRSS35	Q8N3Z0	413 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	STK35	Q8TDR2	534 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	FCAMR	Q8WWV6	532 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	RBPMS	Q93062	196 aa	Known RBP	10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	MMAB	Q96EY8	250 aa	Predicted RBP	10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	FAHD2A	Q96GK7	314 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	RNF2	Q99496	336 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	MRI1	Q9BV20	369 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	GSX2	Q9BZM3	304 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	EGLN1	Q9GZT9	426 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	DUSP15	Q9H1R2	295 aa	Predicted RBP	10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	PPP4R1L	Q9P1A2	415 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	POMT2	Q9UKY4	750 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	SLC6A5	Q9Y345	797 aa		10.4	□□□□□ -0.74
CDK5RAP3-231	ENST00000584063	TECTA	O75443	2155 aa		10.39	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms