RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 KCNJ15Q99712 375 aa19.97■□□□□ 0.79
SNF8-217ENST00000576353 OSBPL10Q9BXB5 764 aa19.97■□□□□ 0.79
SNF8-217ENST00000576353 ABCA1O95477 2261 aa19.97■□□□□ 0.79
SNF8-217ENST00000576353 NIPBLQ6KC79 2804 aaeCLIP19.97■□□□□ 0.79
SNF8-217ENST00000576353 NSD1Q96L73 2696 aaPredicted RBP19.96■□□□□ 0.79
SNF8-217ENST00000576353 A8MV72 311 aaPredicted RBP19.96■□□□□ 0.79
SNF8-217ENST00000576353 RPS7P62081 194 aaKnown RBP19.96■□□□□ 0.79
SNF8-217ENST00000576353 GRB2P62993 217 aaKnown RBP19.96■□□□□ 0.79
SNF8-217ENST00000576353 C6orf52Q5T4I8 152 aa19.96■□□□□ 0.79
SNF8-217ENST00000576353 OR2T2Q6IF00 324 aa19.96■□□□□ 0.79
SNF8-217ENST00000576353 RHOUQ7L0Q8 258 aa19.96■□□□□ 0.79
SNF8-217ENST00000576353 ZNF454Q8N9F8 522 aa19.96■□□□□ 0.79
SNF8-217ENST00000576353 OR8G5Q8NG78 346 aa19.96■□□□□ 0.79
SNF8-217ENST00000576353 OR2Z1Q8NG97 314 aa19.96■□□□□ 0.79
SNF8-217ENST00000576353 RAB3IPQ96QF0 476 aaPredicted RBP19.96■□□□□ 0.79
SNF8-217ENST00000576353 ABHD6Q9BV23 337 aa19.96■□□□□ 0.79
SNF8-217ENST00000576353 OAZ3Q9UMX2 235 aa19.96■□□□□ 0.79
SNF8-217ENST00000576353 ZFHX3Q15911 3703 aa19.95■□□□□ 0.78
SNF8-217ENST00000576353 LRP5LA4QPB2 252 aa19.95■□□□□ 0.78
SNF8-217ENST00000576353 IGFBP5P24593 272 aa19.95■□□□□ 0.78
SNF8-217ENST00000576353 GK2Q14410 553 aaPredicted RBP19.95■□□□□ 0.78
SNF8-217ENST00000576353 TRIP10Q15642 601 aa19.95■□□□□ 0.78
SNF8-217ENST00000576353 Q6ZR03 302 aa19.95■□□□□ 0.78
SNF8-217ENST00000576353 OR5AS1Q8N127 324 aa19.95■□□□□ 0.78
SNF8-217ENST00000576353 OR13G1Q8NGZ3 307 aa19.95■□□□□ 0.78
SNF8-217ENST00000576353 RNF133Q8WVZ7 376 aa19.95■□□□□ 0.78
SNF8-217ENST00000576353 POM121Q96HA1 1249 aa19.95■□□□□ 0.78
SNF8-217ENST00000576353 TOR3AQ9H497 397 aa19.95■□□□□ 0.78
SNF8-217ENST00000576353 IQCF6A8MYZ5 107 aa19.94■□□□□ 0.78
SNF8-217ENST00000576353 APOC1P02654 83 aa19.94■□□□□ 0.78
SNF8-217ENST00000576353 TNFRSF1AP19438 455 aa19.94■□□□□ 0.78
SNF8-217ENST00000576353 SLC2A5P22732 501 aa19.94■□□□□ 0.78
SNF8-217ENST00000576353 PRKXP51817 358 aa19.94■□□□□ 0.78
SNF8-217ENST00000576353 SLC3A1Q07837 685 aa19.94■□□□□ 0.78
SNF8-217ENST00000576353 SLX4IPQ5VYV7 408 aa19.94■□□□□ 0.78
SNF8-217ENST00000576353 PGAP1Q75T13 922 aa19.94■□□□□ 0.78
SNF8-217ENST00000576353 SPATC1Q76KD6 591 aa19.94■□□□□ 0.78
SNF8-217ENST00000576353 BBS1Q8NFJ9 593 aa19.94■□□□□ 0.78
SNF8-217ENST00000576353 CCL17Q92583 94 aa19.94■□□□□ 0.78
SNF8-217ENST00000576353 TIMD4Q96H15 378 aa19.94■□□□□ 0.78
SNF8-217ENST00000576353 SP140LQ9H930 580 aa19.94■□□□□ 0.78
SNF8-217ENST00000576353 IL19Q9UHD0 177 aa19.94■□□□□ 0.78
SNF8-217ENST00000576353 SAC3D1A6NKF1 404 aa19.93■□□□□ 0.78
SNF8-217ENST00000576353 ZAR1LA6NP61 321 aa19.93■□□□□ 0.78
SNF8-217ENST00000576353 CLDN25C9JDP6 229 aa19.93■□□□□ 0.78
SNF8-217ENST00000576353 HSD11B1P28845 292 aa19.93■□□□□ 0.78
SNF8-217ENST00000576353 APOFQ13790 326 aa19.93■□□□□ 0.78
SNF8-217ENST00000576353 MRPL21Q7Z2W9 205 aaKnown RBP19.93■□□□□ 0.78
SNF8-217ENST00000576353 ZNF283Q8N7M2 679 aa19.93■□□□□ 0.78
SNF8-217ENST00000576353 OTOSQ8NHW6 89 aa19.93■□□□□ 0.78
SNF8-217ENST00000576353 RAB1CQ92928 201 aa19.93■□□□□ 0.78
SNF8-217ENST00000576353 MSI2Q96DH6 328 aaKnown RBP19.93■□□□□ 0.78
SNF8-217ENST00000576353 TEAD3Q99594 435 aa19.93■□□□□ 0.78
SNF8-217ENST00000576353 CIB1Q99828 191 aa19.93■□□□□ 0.78
SNF8-217ENST00000576353 PKP2Q99959 881 aa19.93■□□□□ 0.78
SNF8-217ENST00000576353 RBM4BQ9BQ04 359 aaKnown RBP19.93■□□□□ 0.78
SNF8-217ENST00000576353 TMEFF2Q9UIK5 374 aaPredicted RBP19.93■□□□□ 0.78
SNF8-217ENST00000576353 FN1P02751 2386 aaKnown RBP19.93■□□□□ 0.78
SNF8-217ENST00000576353 LOC100289279A0A1B0GTE1 492 aa19.92■□□□□ 0.78
SNF8-217ENST00000576353 H3BNX3 289 aa19.92■□□□□ 0.78
SNF8-217ENST00000576353 PRKYO43930 277 aa19.92■□□□□ 0.78
SNF8-217ENST00000576353 SELENOFO60613 162 aa19.92■□□□□ 0.78
SNF8-217ENST00000576353 LCN1P1Q5VSP4 162 aa19.92■□□□□ 0.78
SNF8-217ENST00000576353 THEM6Q8WUY1 208 aa19.92■□□□□ 0.78
SNF8-217ENST00000576353 SLC30A2Q9BRI3 323 aa19.92■□□□□ 0.78
SNF8-217ENST00000576353 TMEM100Q9NV29 134 aa19.92■□□□□ 0.78
SNF8-217ENST00000576353 H2AFY2Q9P0M6 372 aaPredicted RBP19.92■□□□□ 0.78
SNF8-217ENST00000576353 CACNG2Q9Y698 323 aa19.92■□□□□ 0.78
SNF8-217ENST00000576353 CHD3Q12873 2000 aaKnown RBP19.92■□□□□ 0.78
SNF8-217ENST00000576353 CRLF1O75462 422 aa19.91■□□□□ 0.78
SNF8-217ENST00000576353 LYNP07948 512 aa19.91■□□□□ 0.78
SNF8-217ENST00000576353 ZNF16P17020 682 aaPredicted RBP19.91■□□□□ 0.78
SNF8-217ENST00000576353 EPHA2P29317 976 aa19.91■□□□□ 0.78
SNF8-217ENST00000576353 OPRL1P41146 370 aa19.91■□□□□ 0.78
SNF8-217ENST00000576353 NAA10P41227 235 aaPredicted RBP19.91■□□□□ 0.78
SNF8-217ENST00000576353 CX3CR1P49238 355 aa19.91■□□□□ 0.78
SNF8-217ENST00000576353 SNAI3Q3KNW1 292 aa19.91■□□□□ 0.78
SNF8-217ENST00000576353 C12orf73Q69YU5 71 aa19.91■□□□□ 0.78
SNF8-217ENST00000576353 FAM166AQ6J272 317 aa19.91■□□□□ 0.78
SNF8-217ENST00000576353 SLC16A9Q7RTY1 509 aa19.91■□□□□ 0.78
SNF8-217ENST00000576353 PEG10Q86TG7 708 aaKnown RBP19.91■□□□□ 0.78
SNF8-217ENST00000576353 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.91■□□□□ 0.78
SNF8-217ENST00000576353 TCEANCQ8N8B7 351 aa19.91■□□□□ 0.78
SNF8-217ENST00000576353 BHLHE23Q8NDY6 225 aa19.91■□□□□ 0.78
SNF8-217ENST00000576353 SPRYD4Q8WW59 207 aaPredicted RBP19.91■□□□□ 0.78
SNF8-217ENST00000576353 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.91■□□□□ 0.78
SNF8-217ENST00000576353 N6AMT1Q9Y5N5 214 aa19.91■□□□□ 0.78
SNF8-217ENST00000576353 TGFAP01135 160 aa19.9■□□□□ 0.78
SNF8-217ENST00000576353 H2BFMP0C1H6 154 aa19.9■□□□□ 0.78
SNF8-217ENST00000576353 SLC2A1P11166 492 aa19.9■□□□□ 0.78
SNF8-217ENST00000576353 IL2RGP31785 369 aa19.9■□□□□ 0.78
SNF8-217ENST00000576353 EFNB1P98172 346 aa19.9■□□□□ 0.78
SNF8-217ENST00000576353 MVKQ03426 396 aa19.9■□□□□ 0.78
SNF8-217ENST00000576353 LINC01356Q8N9X3 169 aa19.9■□□□□ 0.78
SNF8-217ENST00000576353 CLDND2Q8NHS1 167 aa19.9■□□□□ 0.78
SNF8-217ENST00000576353 TMEM163Q8TC26 289 aa19.9■□□□□ 0.78
SNF8-217ENST00000576353 AMELYQ99218 206 aa19.9■□□□□ 0.78
SNF8-217ENST00000576353 REPIN1Q9BWE0 567 aaKnown RBP19.9■□□□□ 0.78
SNF8-217ENST00000576353 YIPF3Q9GZM5 350 aa19.9■□□□□ 0.78
SNF8-217ENST00000576353 OPA3Q9H6K4 179 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms