RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 PIP4P2Q8N4L2 257 aa7.42□□□□□ -1.22
SMG6-218ENST00000575454 LRRC75AQ8NAA5 344 aa7.42□□□□□ -1.22
SMG6-218ENST00000575454 OR10A6Q8NH74 314 aa7.42□□□□□ -1.22
SMG6-218ENST00000575454 TSPEARQ8WU66 669 aa7.42□□□□□ -1.22
SMG6-218ENST00000575454 SPRYD4Q8WW59 207 aaPredicted RBP7.42□□□□□ -1.22
SMG6-218ENST00000575454 SGCDQ92629 289 aa7.42□□□□□ -1.22
SMG6-218ENST00000575454 C7orf26Q96N11 449 aa7.42□□□□□ -1.22
SMG6-218ENST00000575454 ZNRD1Q9P1U0 126 aa7.42□□□□□ -1.22
SMG6-218ENST00000575454 POLR1DQ9Y2S0 133 aa7.42□□□□□ -1.22
SMG6-218ENST00000575454 TRAV27A0A087WT01 109 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 H7C1C5 153 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 RER1O15258 196 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 SLC16A7O60669 478 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 PTBP3O95758 552 aaKnown RBP7.41□□□□□ -1.22
SMG6-218ENST00000575454 CD14P08571 375 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 DBHP09172 617 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 CTLA4P16410 223 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 KIR2DS4P43632 304 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 LCN6P62502 163 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 EMX1Q04741 257 aaPredicted RBP7.41□□□□□ -1.22
SMG6-218ENST00000575454 NFYCQ13952 458 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 OR8G1Q15617 311 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 KCNMB1Q16558 191 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 CCDC92Q53HC0 331 aaPredicted RBP7.41□□□□□ -1.22
SMG6-218ENST00000575454 COLCA1Q6ZS62 124 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 PGAP1Q75T13 922 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 VMO1Q7Z5L0 202 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 BOLLQ8N9W6 283 aaKnown RBP7.41□□□□□ -1.22
SMG6-218ENST00000575454 C19orf18Q8NEA5 215 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 OR4C13Q8NGP0 309 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 LZICQ8WZA0 190 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 CFHR4Q92496 578 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 ZNF570Q96NI8 536 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 FAM234AQ9H0X4 552 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 RASSF4Q9H2L5 321 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 NMNAT1Q9HAN9 279 aaPredicted RBP7.41□□□□□ -1.22
SMG6-218ENST00000575454 RAB18Q9NP72 206 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 UFSP2Q9NUQ7 469 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 KAAG1Q9UBP8 84 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 CTSZQ9UBR2 303 aa7.41□□□□□ -1.22
SMG6-218ENST00000575454 RPUSD1Q9UJJ7 312 aaKnown RBP7.41□□□□□ -1.22
SMG6-218ENST00000575454 DVL1O14640 695 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 NPFFO15130 113 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 OR10H3O60404 316 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 CRYBA2P53672 197 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 PRKCDQ05655 676 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 ACSM1Q08AH1 577 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 CYLC2Q14093 348 aaPredicted RBP7.4□□□□□ -1.22
SMG6-218ENST00000575454 SELPLGQ14242 412 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 GK2Q14410 553 aaPredicted RBP7.4□□□□□ -1.22
SMG6-218ENST00000575454 TRAM2Q15035 370 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 MPPED2Q15777 294 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 PRAMEF6Q5VXH4 476 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 GPR139Q6DWJ6 353 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 ERICH5Q6P6B1 374 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 DNM1P34Q6PK57 102 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 C1orf122Q6ZSJ8 110 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 ADCK1Q86TW2 530 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 NRMQ8IXM6 262 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 PDZD9Q8IXQ8 264 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 OR2T6Q8NHC8 308 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 ST8SIA4Q92187 359 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 SLCO4A1Q96BD0 722 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 PRRC1Q96M27 445 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 FNDC11Q9BVV2 318 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 PPA2Q9H2U2 334 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 RERGLQ9H628 205 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 RANBP3Q9H6Z4 567 aaPredicted RBP7.4□□□□□ -1.22
SMG6-218ENST00000575454 WDR76Q9H967 626 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 SMURF1Q9HCE7 757 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 C14orf119Q9NWQ9 140 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 VSX1Q9NZR4 365 aaPredicted RBP7.4□□□□□ -1.22
SMG6-218ENST00000575454 ONECUT1Q9UBC0 465 aa7.4□□□□□ -1.22
SMG6-218ENST00000575454 COA3Q9Y2R0 106 aaPredicted RBP7.4□□□□□ -1.22
SMG6-218ENST00000575454 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.39□□□□□ -1.23
SMG6-218ENST00000575454 SHOX2O60902 331 aaPredicted RBP7.39□□□□□ -1.23
SMG6-218ENST00000575454 GYPAP02724 150 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 LCATP04180 440 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 MUC1P15941 1255 aaPredicted RBP7.39□□□□□ -1.23
SMG6-218ENST00000575454 TNFRSF1BP20333 461 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 CA6P23280 308 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 CRABP1P29762 137 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 SDHAP31040 664 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 GRK5P34947 590 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 OR1E2P47887 323 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 GZMMP51124 257 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 UBE2E1P51965 193 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 EFNB2P52799 333 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 HIST1H3AP68431 136 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 FHL1Q13642 323 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 MICBQ29980 383 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 ZBED5Q49AG3 693 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 OXLD1Q5BKU9 147 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 MESTQ5EB52 335 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 HIST2H3PS2Q5TEC6 136 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 TEX36Q5VZQ5 186 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 NCR3LG1Q68D85 454 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 TMPRSS11FQ6ZWK6 438 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 HIST2H3AQ71DI3 136 aa7.39□□□□□ -1.23
SMG6-218ENST00000575454 RRM2BQ7LG56 351 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms