RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 H7C1Q1 480 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 ADH1AP07327 375 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 LYL1P12980 280 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 HOXA5P20719 270 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 RPS10P46783 165 aaKnown RBP12.88□□□□□ -0.35
SMG6-215ENST00000574501 ZNF616Q08AN1 781 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 UNC119Q13432 240 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 HMGN3Q15651 99 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 GUK1Q16774 197 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 ACTBL2Q562R1 376 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 TEX30Q5JUR7 227 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 PTCRAQ6ISU1 281 aaPredicted RBP12.88□□□□□ -0.35
SMG6-215ENST00000574501 CLEC9AQ6UXN8 241 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 UNQ6494/PRO21346Q6UXR6 183 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 NPSR1Q6W5P4 371 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 THRSPQ92748 146 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 ZNF524Q96C55 264 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 TM4SF19Q96DZ7 209 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 ZDHHC12Q96GR4 267 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 TOX2Q96NM4 488 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 MESP1Q9BRJ9 268 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 OPA3Q9H6K4 179 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 STARD5Q9NSY2 213 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 PILRAQ9UKJ1 303 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 FLVCR1Q9Y5Y0 555 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 NOTCH4Q99466 2003 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 A0A1B0GV50 99 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 SERINC4A6NH21 518 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 CEACAM5P06731 702 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 SFTPBP07988 381 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 HKR1P10072 659 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 NDUFB7P17568 137 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 S100A2P29034 98 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 EGR4Q05215 589 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 FDX2Q6P4F2 183 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 LILRA6Q6PI73 481 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 ANKRD9Q96BM1 317 aaPredicted RBP12.88□□□□□ -0.35
SMG6-215ENST00000574501 S100PBPQ96BU1 408 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 RAB18Q9NP72 206 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 GDE1Q9NZC3 331 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 EMC9Q9Y3B6 208 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 POMT1Q9Y6A1 747 aa12.88□□□□□ -0.35
SMG6-215ENST00000574501 MED19A0JLT2 244 aaPredicted RBP12.87□□□□□ -0.35
SMG6-215ENST00000574501 FKTNO75072 461 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 OR6A2O95222 327 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 ASAH2BP0C7U1 165 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 ATXN8OSP0DMR3 200 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 SNCAP37840 140 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 FHITP49789 147 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 TAS2R31P59538 309 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 EIF5AP63241 154 aaKnown RBP12.87□□□□□ -0.35
SMG6-215ENST00000574501 SUPT4H1P63272 117 aaKnown RBP12.87□□□□□ -0.35
SMG6-215ENST00000574501 ZNF141Q15928 474 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 POMZP3Q6PJE2 187 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 OR56B1Q8NGI3 324 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 OR13C9Q8NGT0 318 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 TERB2Q8NHR7 220 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 MALSU1Q96EH3 234 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 KLHDC3Q9BQ90 382 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 CHST5Q9GZS9 411 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 SLC26A1Q9H2B4 701 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 PRDM13Q9H4Q3 707 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.87□□□□□ -0.35
SMG6-215ENST00000574501 STARD10Q9Y365 291 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 LOC101059948A0A1B0GTJ6 334 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 OTOL1A6NHN0 477 aaPredicted RBP12.87□□□□□ -0.35
SMG6-215ENST00000574501 NUDT21O43809 227 aaKnown RBP12.87□□□□□ -0.35
SMG6-215ENST00000574501 SFT2D2O95562 160 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 OR13C7P0DN81 318 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 CDX1P47902 265 aaPredicted RBP12.87□□□□□ -0.35
SMG6-215ENST00000574501 PDZD11Q5EBL8 140 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 TMEM268Q5VZI3 342 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 ANGPTL5Q86XS5 388 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 TMEM104Q8NE00 496 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 OR10G6Q8NH81 332 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 RAB22AQ9UL26 194 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 MAFFQ9ULX9 164 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 LRP12Q9Y561 859 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 SPACA6W5XKT8 324 aa12.87□□□□□ -0.35
SMG6-215ENST00000574501 FOXS1O43638 330 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 ZNF354AO60765 605 aaPredicted RBP12.86□□□□□ -0.35
SMG6-215ENST00000574501 TXNDC12O95881 172 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 CST4P01036 141 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 S1PR1P21453 382 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 GDI1P31150 447 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 RIDAP52758 137 aaKnown RBP12.86□□□□□ -0.35
SMG6-215ENST00000574501 SPEM2Q0P670 501 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 SLC18B1Q6NT16 456 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 CBLN3Q6UW01 205 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 CATSPERDQ86XM0 798 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 OR9K2Q8NGE7 335 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 OR10D4PQ8NGN7 298 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 ST7LQ8TDW4 575 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 WFIKKN2Q8TEU8 576 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 TIMM29Q9BSF4 260 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 SRMSQ9H3Y6 488 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 LYRM4Q9HD34 91 aa12.86□□□□□ -0.35
SMG6-215ENST00000574501 PHPT1Q9NRX4 125 aaPredicted RBP12.86□□□□□ -0.35
SMG6-215ENST00000574501 MRPL22Q9NWU5 206 aaKnown RBP12.86□□□□□ -0.35
SMG6-215ENST00000574501 GAR1Q9NY12 217 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms