RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 AMDHD2Q9Y303 409 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 SF3B6Q9Y3B4 125 aaKnown RBP20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 SLC25A15Q9Y619 301 aa20.9■□□□□ 0.94
ATPAF1-213ENST00000574428 OR4C45A6NMZ5 311 aa20.89■□□□□ 0.93
ATPAF1-213ENST00000574428 ANXA2P07355 339 aaKnown RBP20.89■□□□□ 0.93
ATPAF1-213ENST00000574428 ACSM4P0C7M7 580 aa20.89■□□□□ 0.93
ATPAF1-213ENST00000574428 ZNF14P17017 642 aaPredicted RBP20.89■□□□□ 0.93
ATPAF1-213ENST00000574428 GABRA5P31644 462 aa20.89■□□□□ 0.93
ATPAF1-213ENST00000574428 TGFBR1P36897 503 aa20.89■□□□□ 0.93
ATPAF1-213ENST00000574428 ALKBH2Q6NS38 261 aa20.89■□□□□ 0.93
ATPAF1-213ENST00000574428 FAM57BQ71RH2 274 aa20.89■□□□□ 0.93
ATPAF1-213ENST00000574428 OR51E2Q9H255 320 aa20.89■□□□□ 0.93
ATPAF1-213ENST00000574428 C5orf49A4QMS7 147 aa20.88■□□□□ 0.93
ATPAF1-213ENST00000574428 SERPINA5P05154 406 aa20.88■□□□□ 0.93
ATPAF1-213ENST00000574428 COX5BP10606 129 aa20.88■□□□□ 0.93
ATPAF1-213ENST00000574428 CBR1P16152 277 aa20.88■□□□□ 0.93
ATPAF1-213ENST00000574428 CCNOP22674 350 aa20.88■□□□□ 0.93
ATPAF1-213ENST00000574428 CCR9P51686 369 aa20.88■□□□□ 0.93
ATPAF1-213ENST00000574428 TPTEP56180 551 aa20.88■□□□□ 0.93
ATPAF1-213ENST00000574428 OR13C5Q8NGS8 318 aa20.88■□□□□ 0.93
ATPAF1-213ENST00000574428 OR5AK2Q8NH90 309 aa20.88■□□□□ 0.93
ATPAF1-213ENST00000574428 PBOV1Q9GZY1 135 aa20.88■□□□□ 0.93
ATPAF1-213ENST00000574428 C5orf63A6NC05 138 aa20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 ZG16O60844 167 aa20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 TAB1Q15750 504 aa20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 ZNF544Q6NX49 715 aa20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 PRSS45Q7RTY3 260 aa20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 RDH10Q8IZV5 341 aa20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 ZNF676Q8N7Q3 588 aa20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 SLC30A7Q8NEW0 376 aa20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 POM121L2Q96KW2 1035 aa20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 HIVEP3Q5T1R4 2406 aa20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 H3BSH0 61 aa20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 APLNRP35414 380 aa20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 INSL4Q14641 139 aa20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 DRAM2Q6UX65 266 aa20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 C22orf34Q6ZV56 151 aa20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 OR8B12Q8NGG6 310 aa20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 TBC1D15Q8TC07 691 aa20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 RGP1Q92546 391 aaPredicted RBP20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 DCLRE1CQ96SD1 692 aaKnown RBP20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 CHCHD6Q9BRQ6 235 aa20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 MOB1AQ9H8S9 216 aa20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 ZNF319Q9P2F9 582 aa20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 NUFIP1Q9UHK0 495 aaKnown RBP20.87■□□□□ 0.93
ATPAF1-213ENST00000574428 TMEM212A6NML5 194 aa20.86■□□□□ 0.93
ATPAF1-213ENST00000574428 IGKV3-15P01624 115 aa20.86■□□□□ 0.93
ATPAF1-213ENST00000574428 APOC1P02654 83 aa20.86■□□□□ 0.93
ATPAF1-213ENST00000574428 PSMA1P25786 263 aaKnown RBP20.86■□□□□ 0.93
ATPAF1-213ENST00000574428 FABP5Q01469 135 aa20.86■□□□□ 0.93
ATPAF1-213ENST00000574428 PPA1Q15181 289 aa20.86■□□□□ 0.93
ATPAF1-213ENST00000574428 FBXL19-AS1Q494R0 122 aa20.86■□□□□ 0.93
ATPAF1-213ENST00000574428 PAQR4Q8N4S7 273 aaPredicted RBP20.86■□□□□ 0.93
ATPAF1-213ENST00000574428 MUCL1Q96DR8 90 aa20.86■□□□□ 0.93
ATPAF1-213ENST00000574428 TRMT61AQ96FX7 289 aaKnown RBP20.86■□□□□ 0.93
ATPAF1-213ENST00000574428 PGAM5Q96HS1 289 aa20.86■□□□□ 0.93
ATPAF1-213ENST00000574428 COMMD4Q9H0A8 199 aa20.86■□□□□ 0.93
ATPAF1-213ENST00000574428 ZNF462Q96JM2 2506 aa20.86■□□□□ 0.93
ATPAF1-213ENST00000574428 LOC100506127A0A0U1RQW1 187 aa20.85■□□□□ 0.93
ATPAF1-213ENST00000574428 GPX5O75715 221 aa20.85■□□□□ 0.93
ATPAF1-213ENST00000574428 TTRP02766 147 aa20.85■□□□□ 0.93
ATPAF1-213ENST00000574428 CD1AP06126 327 aa20.85■□□□□ 0.93
ATPAF1-213ENST00000574428 CD53P19397 219 aa20.85■□□□□ 0.93
ATPAF1-213ENST00000574428 CRYBB2P43320 205 aa20.85■□□□□ 0.93
ATPAF1-213ENST00000574428 ELMOD2Q8IZ81 293 aa20.85■□□□□ 0.93
ATPAF1-213ENST00000574428 DYNC2LI1Q8TCX1 351 aa20.85■□□□□ 0.93
ATPAF1-213ENST00000574428 STUB1Q9UNE7 303 aa20.85■□□□□ 0.93
ATPAF1-213ENST00000574428 ZNF281Q9Y2X9 895 aa20.85■□□□□ 0.93
ATPAF1-213ENST00000574428 CHD6Q8TD26 2715 aa20.85■□□□□ 0.93
ATPAF1-213ENST00000574428 GPRIN2O60269 458 aa20.85■□□□□ 0.93
ATPAF1-213ENST00000574428 LCATP04180 440 aa20.85■□□□□ 0.93
ATPAF1-213ENST00000574428 DYNC1I2Q13409 638 aaKnown RBP20.85■□□□□ 0.93
ATPAF1-213ENST00000574428 SNAI3Q3KNW1 292 aa20.85■□□□□ 0.93
ATPAF1-213ENST00000574428 OR10AC1Q8NH08 325 aa20.85■□□□□ 0.93
ATPAF1-213ENST00000574428 RNASE6Q93091 150 aaKnown RBP20.85■□□□□ 0.93
ATPAF1-213ENST00000574428 EXOSC4Q9NPD3 245 aaKnown RBP20.85■□□□□ 0.93
ATPAF1-213ENST00000574428 KCNJ16Q9NPI9 418 aa20.85■□□□□ 0.93
ATPAF1-213ENST00000574428 PYCARD-AS1I3L0S3 204 aa20.84■□□□□ 0.93
ATPAF1-213ENST00000574428 P2RY10O00398 339 aa20.84■□□□□ 0.93
ATPAF1-213ENST00000574428 TBX1O43435 398 aa20.84■□□□□ 0.93
ATPAF1-213ENST00000574428 CLPXO76031 633 aa20.84■□□□□ 0.93
ATPAF1-213ENST00000574428 GRNP28799 593 aaKnown RBP20.84■□□□□ 0.93
ATPAF1-213ENST00000574428 ZNF83P51522 516 aa20.84■□□□□ 0.93
ATPAF1-213ENST00000574428 RPS11P62280 158 aaKnown RBP eCLIP20.84■□□□□ 0.93
ATPAF1-213ENST00000574428 TBC1D28Q2M2D7 210 aa20.84■□□□□ 0.93
ATPAF1-213ENST00000574428 GFOD2Q3B7J2 385 aa20.84■□□□□ 0.93
ATPAF1-213ENST00000574428 OR51A4Q8NGJ6 313 aa20.84■□□□□ 0.93
ATPAF1-213ENST00000574428 NPAP1Q9NZP6 1156 aa20.84■□□□□ 0.93
ATPAF1-213ENST00000574428 DIDO1Q9BTC0 2240 aaKnown RBP20.84■□□□□ 0.93
ATPAF1-213ENST00000574428 IGLV1-44P01699 117 aa20.83■□□□□ 0.93
ATPAF1-213ENST00000574428 CECR9P0C854 216 aa20.83■□□□□ 0.93
ATPAF1-213ENST00000574428 MS4A15Q8N5U1 240 aa20.83■□□□□ 0.93
ATPAF1-213ENST00000574428 ABHD4Q8TB40 342 aa20.83■□□□□ 0.93
ATPAF1-213ENST00000574428 ITLN2Q8WWU7 325 aaPredicted RBP20.83■□□□□ 0.93
ATPAF1-213ENST00000574428 USB1Q9BQ65 265 aaKnown RBP20.83■□□□□ 0.93
ATPAF1-213ENST00000574428 CENPOQ9BU64 300 aa20.83■□□□□ 0.93
ATPAF1-213ENST00000574428 CRNNQ9UBG3 495 aaPredicted RBP20.83■□□□□ 0.93
ATPAF1-213ENST00000574428 RTTNQ86VV8 2226 aa20.83■□□□□ 0.92
ATPAF1-213ENST00000574428 IGHV1-18A0A0C4DH31 117 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 ACOD1A6NK06 481 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms