RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 FNDC8Q8TC99 324 aa8.28□□□□□ -1.08
NPLOC4-216ENST00000574344 S100ZQ8WXG8 99 aa8.28□□□□□ -1.08
NPLOC4-216ENST00000574344 RDH5Q92781 318 aa8.28□□□□□ -1.08
NPLOC4-216ENST00000574344 BORCS5Q969J3 196 aa8.28□□□□□ -1.08
NPLOC4-216ENST00000574344 TSPAN32Q96QS1 320 aa8.28□□□□□ -1.08
NPLOC4-216ENST00000574344 SIGLEC11Q96RL6 698 aa8.28□□□□□ -1.08
NPLOC4-216ENST00000574344 SOX7Q9BT81 388 aa8.28□□□□□ -1.08
NPLOC4-216ENST00000574344 ALG12Q9BV10 488 aa8.28□□□□□ -1.08
NPLOC4-216ENST00000574344 WDR12Q9GZL7 423 aaKnown RBP8.28□□□□□ -1.08
NPLOC4-216ENST00000574344 NAA50Q9GZZ1 169 aaKnown RBP8.28□□□□□ -1.08
NPLOC4-216ENST00000574344 EGLN3Q9H6Z9 239 aa8.28□□□□□ -1.08
NPLOC4-216ENST00000574344 SIAEQ9HAT2 523 aa8.28□□□□□ -1.08
NPLOC4-216ENST00000574344 PLGRKTQ9HBL7 147 aa8.28□□□□□ -1.08
NPLOC4-216ENST00000574344 HMG20AQ9NP66 347 aa8.28□□□□□ -1.08
NPLOC4-216ENST00000574344 SLCO1C1Q9NYB5 712 aa8.28□□□□□ -1.08
NPLOC4-216ENST00000574344 H2AFY2Q9P0M6 372 aaPredicted RBP8.28□□□□□ -1.08
NPLOC4-216ENST00000574344 EIF3KQ9UBQ5 218 aaKnown RBP8.28□□□□□ -1.08
NPLOC4-216ENST00000574344 DIMT1Q9UNQ2 313 aaKnown RBP8.28□□□□□ -1.08
NPLOC4-216ENST00000574344 EXOSC1Q9Y3B2 195 aaKnown RBP8.28□□□□□ -1.08
NPLOC4-216ENST00000574344 SVEP1Q4LDE5 3571 aa8.27□□□□□ -1.08
NPLOC4-216ENST00000574344 DNHD1Q96M86 4753 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 IGKV1D-43A0A0B4J1Z2 117 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 C5orf49A4QMS7 147 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 A6NIZ1 184 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 RIIAD1A6NNX1 92 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 H7C1C5 153 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 CCRL2O00421 344 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 XKRYO14609 159 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 PPIHO43447 177 aaKnown RBP8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 LILRA1O75019 489 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 NCR1O76036 304 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 IFNGP01579 166 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 IGHMP01871 453 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 MMP7P09237 267 aaPredicted RBP8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 TSPAN19P0C672 248 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 HSMCR30P0CW71 290 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 PAICSP22234 425 aaKnown RBP8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 STOMP27105 288 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 GCH1P30793 250 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 SLC6A6P31641 620 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 SOX6P35712 828 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 SRP14P37108 136 aaKnown RBP8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 SLC9A3P48764 834 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 GDI2P50395 445 aaKnown RBP8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 ZNF133P52736 654 aaPredicted RBP8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 UCP2P55851 309 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 RAP1BP61224 184 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 LCN6P62502 163 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 RAP1AP62834 184 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 CCL8P80075 99 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 PRKCDQ05655 676 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 CR1LQ2VPA4 569 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 ARMCX4Q5H9R4 360 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 CLEC12AQ5QGZ9 265 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 ELFN2Q5R3F8 820 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 SPATA46Q5T0L3 261 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 THEM4Q5T1C6 240 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 RNLSQ5VYX0 342 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 UNQ6126/PRO20091Q6UXV3 157 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 ZNF519Q8TB69 540 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 HPS1Q92902 700 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 UBE2FQ969M7 185 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 NABP1Q96AH0 204 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 ZNF416Q9BWM5 594 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 AMBNQ9NP70 447 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 PALMDQ9NP74 551 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 HINT3Q9NQE9 182 aaKnown RBP8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 ZNF275Q9NSD4 429 aaPredicted RBP8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 DECR2Q9NUI1 292 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 GRHPRQ9UBQ7 328 aa8.27□□□□□ -1.09
NPLOC4-216ENST00000574344 PLSCR5A0PG75 271 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 C17orf100A8MU93 164 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 PRKYO43930 277 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 CDC14BO60729 498 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 ZNF250P15622 560 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 ZNF182P17025 639 aaPredicted RBP8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 ZNF3P17036 446 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 FUT4P22083 530 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 COL8A2P25067 703 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 LAP3P28838 519 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 C21orf33P30042 268 aaPredicted RBP8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 ATP6V1E1P36543 226 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 TGFBR2P37173 567 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 MAGEB1P43366 347 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 SLC15A1P46059 708 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 MTNR1AP48039 350 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 PCBD1P61457 104 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 IRF3Q14653 427 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 ZNF846Q147U1 533 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 CTF1Q16619 201 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 MOGQ16653 247 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 PCGF3Q3KNV8 242 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 ZNF718Q3SXZ3 478 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 ANKDD1AQ495B1 522 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 SLC25A47Q6Q0C1 308 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 SMARCD3Q6STE5 483 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 GLCCI1Q86VQ1 547 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 PHC2Q8IXK0 858 aa8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 CPEB3Q8NE35 698 aaKnown RBP8.26□□□□□ -1.09
NPLOC4-216ENST00000574344 CLDND2Q8NHS1 167 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms