RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 H2BFMP0C1H6 154 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 SELEP16581 610 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 ALOX5APP20292 161 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 HSD11B1P28845 292 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 OTX1P32242 354 aaPredicted RBP9.45□□□□□ -0.9
CHD3-216ENST00000573936 NAA10P41227 235 aaPredicted RBP9.45□□□□□ -0.9
CHD3-216ENST00000573936 DSCR9P59020 149 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 SNRPGP62308 76 aaKnown RBP9.45□□□□□ -0.9
CHD3-216ENST00000573936 MALLQ13021 153 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 OCLNQ16625 522 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 NKPD1Q17RQ9 610 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 MSMPQ1L6U9 139 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 RSPO1Q2MKA7 263 aaPredicted RBP9.45□□□□□ -0.9
CHD3-216ENST00000573936 Q5PR19 223 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 SPATA46Q5T0L3 261 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 TTC23Q5W5X9 447 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 KCTD18Q6PI47 426 aaPredicted RBP9.45□□□□□ -0.9
CHD3-216ENST00000573936 DEGS2Q6QHC5 323 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 BCDIN3DQ7Z5W3 292 aaKnown RBP9.45□□□□□ -0.9
CHD3-216ENST00000573936 LRP11Q86VZ4 500 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 ZNF283Q8N7M2 679 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 OR10S1Q8NGN2 331 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 SPATA3Q8NHX4 192 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 Q96MT0 163 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 ZNF582Q96NG8 517 aaPredicted RBP9.45□□□□□ -0.9
CHD3-216ENST00000573936 CNN2Q99439 309 aaKnown RBP9.45□□□□□ -0.9
CHD3-216ENST00000573936 APOL4Q9BPW4 351 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 ADI1Q9BV57 179 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 NIPAL2Q9H841 368 aa9.45□□□□□ -0.9
CHD3-216ENST00000573936 MYOZ1Q9NP98 299 aaPredicted RBP9.45□□□□□ -0.9
CHD3-216ENST00000573936 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.45□□□□□ -0.9
CHD3-216ENST00000573936 DSCAMO60469 2012 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 ATRQ13535 2644 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 PLSCR5A0PG75 271 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 KIAA1324LA8MWY0 1029 aaPredicted RBP9.44□□□□□ -0.9
CHD3-216ENST00000573936 ZNF670-ZNF695F2Z2N8 137 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 LY6G6DO95868 133 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 IGHV4-39P01824 125 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 MRPL3P09001 348 aaKnown RBP9.44□□□□□ -0.9
CHD3-216ENST00000573936 CSF3P09919 207 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 PSKH1P11801 424 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 RAC2P15153 192 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 KITLGP21583 273 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 ATP6V1E1P36543 226 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 ALDH3B1P43353 468 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 SLC6A9P48067 706 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 PRKXP51817 358 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 ADARB1P78563 741 aaKnown RBP9.44□□□□□ -0.9
CHD3-216ENST00000573936 ZMAT1Q5H9K5 638 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 C6orf52Q5T4I8 152 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 FBXW12Q6X9E4 464 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 KRT77Q7Z794 578 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 DHRSXQ8N5I4 330 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 CYGBQ8WWM9 190 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 HAVCR1Q96D42 359 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 CMBLQ96DG6 245 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 DIRC2Q96SL1 478 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 ZNF184Q99676 751 aaPredicted RBP9.44□□□□□ -0.9
CHD3-216ENST00000573936 MROQ9BYG7 248 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 CLN6Q9NWW5 311 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 PTTG3PQ9NZH4 202 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 MYEF2Q9P2K5 600 aaKnown RBP9.44□□□□□ -0.9
CHD3-216ENST00000573936 CADP27708 2225 aa9.44□□□□□ -0.9
CHD3-216ENST00000573936 HIVEP2P31629 2446 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 H0YAE9 185 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 SMAD7O15105 426 aaKnown RBP9.43□□□□□ -0.9
CHD3-216ENST00000573936 TIMM8AO60220 97 aaPredicted RBP9.43□□□□□ -0.9
CHD3-216ENST00000573936 SSX4O60224 188 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 ZNF254O75437 659 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 SBK2P0C263 348 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 OR2T7P0C7T2 308 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 MPV17P39210 176 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 CAPGP40121 348 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 OPRL1P41146 370 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 HSPA13P48723 471 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 CX3CR1P49238 355 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 ZNF81P51508 661 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 PSG7Q13046 419 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 MAD2L1BPQ15013 274 aaPredicted RBP9.43□□□□□ -0.9
CHD3-216ENST00000573936 CLEC12BQ2HXU8 276 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 PCGF3Q3KNV8 242 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 FAM209AQ5JX71 171 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 CLEC2AQ6UVW9 174 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 SPATC1Q76KD6 591 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 NAA40Q86UY6 237 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 PRIMA1Q86XR5 153 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 SLC35F2Q8IXU6 374 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 OR51G2Q8NGK0 314 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 OR2T27Q8NH04 317 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 RHOXF1Q8NHV9 184 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 TFAP2CQ92754 450 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 UBE2FQ969M7 185 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 SORCS2Q96PQ0 1159 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 MYCBPQ99417 103 aaPredicted RBP9.43□□□□□ -0.9
CHD3-216ENST00000573936 RHNO1Q9BSD3 238 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 OPA3Q9H6K4 179 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 ADGRL4Q9HBW9 690 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 NKIRAS2Q9NYR9 191 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 DNAJC27Q9NZQ0 273 aa9.43□□□□□ -0.9
CHD3-216ENST00000573936 PURGQ9UJV8 347 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms