RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 ZNF275Q9NSD4 429 aaPredicted RBP12.63□□□□□ -0.39
NPLOC4-207ENST00000572346 MRPL22Q9NWU5 206 aaKnown RBP12.63□□□□□ -0.39
NPLOC4-207ENST00000572346 CLN6Q9NWW5 311 aa12.63□□□□□ -0.39
NPLOC4-207ENST00000572346 PLEK2Q9NYT0 353 aa12.63□□□□□ -0.39
NPLOC4-207ENST00000572346 TREM2Q9NZC2 230 aa12.63□□□□□ -0.39
NPLOC4-207ENST00000572346 DNAJC27Q9NZQ0 273 aa12.63□□□□□ -0.39
NPLOC4-207ENST00000572346 DUSP13Q9UII6 198 aa12.63□□□□□ -0.39
NPLOC4-207ENST00000572346 COMMD3-BMI1R4GMX3 469 aa12.63□□□□□ -0.39
NPLOC4-207ENST00000572346 DYSFO75923 2080 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 H0YJX3 145 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 SGCEO43556 437 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 DOK2O60496 412 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 SERPINA5P05154 406 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 SLC2A5P22732 501 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 CFPP27918 469 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 APLNRP35414 380 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 ATP6V1E1P36543 226 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 VHLP40337 213 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 AQP4P55087 323 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 SNRPGP62308 76 aaKnown RBP12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 MRPS11P82912 194 aaKnown RBP12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 EFNB1P98172 346 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 PSG4Q00888 419 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 TBC1D28Q2M2D7 210 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 AADACL4Q5VUY2 407 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 MEDAGQ5VYS4 303 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 ZNF774Q6NX45 483 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 TMEM154Q6P9G4 183 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 CORO6Q6QEF8 472 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 SHFQ7M4L6 423 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 OR1J2Q8NGS2 313 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 ZFAND2BQ8WV99 257 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 Q96MT0 163 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 TEAD3Q99594 435 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 WDR76Q9H967 626 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 CDH20Q9HBT6 801 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 GRIP1Q9Y3R0 1128 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 LHFPL6Q9Y693 200 aa12.62□□□□□ -0.39
NPLOC4-207ENST00000572346 A0A1W2PPW3 197 aa12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 E9PQ18 207 aa12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 H0YAE9 185 aa12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 RER1O15258 196 aa12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 PPIHO43447 177 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 RP2O75695 350 aa12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 CLIC3O95833 236 aa12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 CCNOP22674 350 aa12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 NAA10P41227 235 aaPredicted RBP12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 RPS27P42677 84 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 MAGEB1P43366 347 aa12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 HTR5AP47898 357 aa12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 GDI2P50395 445 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 LMO4P61968 165 aa12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 ADARB1P78563 741 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 IL18R1Q13478 541 aa12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 ALKBH6Q3KRA9 238 aa12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 RGS7BPQ6MZT1 257 aaPredicted RBP12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 IZUMO2Q6UXV1 221 aa12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 SLC30A7Q8NEW0 376 aa12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 ZNF582Q96NG8 517 aaPredicted RBP12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 WNT5BQ9H1J7 359 aa12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 WARS2Q9UGM6 360 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 CYB5R1Q9UHQ9 305 aa12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 TENM1Q9UKZ4 2725 aa12.61□□□□□ -0.39
NPLOC4-207ENST00000572346 CCDC182A6NF36 153 aa12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 SELENOFO60613 162 aa12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 ENTPD6O75354 484 aa12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 CLPTM1O96005 669 aa12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 MRPL3P09001 348 aaKnown RBP12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 FAM157BP0CG42 384 aa12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 STOMP27105 288 aa12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 HTR1FP30939 366 aa12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 HSPA13P48723 471 aa12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 EIF2B1Q14232 305 aaKnown RBP12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 TAF13Q15543 124 aa12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 SNCBQ16143 134 aa12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 OCLNQ16625 522 aa12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 NKPD1Q17RQ9 610 aa12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 TEX30Q5JUR7 227 aa12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 ZNF691Q5VV52 312 aa12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 SLC18B1Q6NT16 456 aa12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 DPY19L4Q7Z388 723 aa12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 ENTHD1Q8IYW4 607 aa12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 C8orf59Q8N0T1 100 aaPredicted RBP12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 PAQR4Q8N4S7 273 aaPredicted RBP12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 OR51F2Q8NH61 342 aa12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 CNN2Q99439 309 aaKnown RBP12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 MARCH7Q9H992 704 aa12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 TAAR3PQ9P1P4 343 aa12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 AASSQ9UDR5 926 aa12.6□□□□□ -0.39
NPLOC4-207ENST00000572346 IGLV3-9A0A075B6K5 115 aa12.59□□□□□ -0.39
NPLOC4-207ENST00000572346 C17orf100A8MU93 164 aa12.59□□□□□ -0.39
NPLOC4-207ENST00000572346 RGS9O75916 674 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-207ENST00000572346 CCL2P13500 99 aa12.59□□□□□ -0.39
NPLOC4-207ENST00000572346 SCGB2A2Q13296 93 aa12.59□□□□□ -0.39
NPLOC4-207ENST00000572346 TMED1Q13445 227 aa12.59□□□□□ -0.39
NPLOC4-207ENST00000572346 CCDC92Q53HC0 331 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-207ENST00000572346 FAHD2BQ6P2I3 314 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-207ENST00000572346 C1orf229Q6ZS94 237 aaPredicted RBP12.59□□□□□ -0.39
NPLOC4-207ENST00000572346 VASH1Q7L8A9 365 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms