RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 SGK494Q96LW2 274 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 PPP3R2Q96LZ3 170 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 FOPNLQ96NB1 174 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 FRG2BQ96QU4 278 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 OR2M4Q96R27 311 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 PHB2Q99623 299 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 NDC1Q9BTX1 674 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 ALG8Q9BVK2 526 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 MND1Q9BWT6 205 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 BEX2Q9BXY8 128 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 SLC29A3Q9BZD2 475 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 DPY30Q9C005 99 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 OR10A5Q9H207 317 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 SEMA6CQ9H3T2 930 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 CLMPQ9H6B4 373 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 GAREM1Q9H706 876 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 CXorf36Q9H7Y0 433 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 NT5DC2Q9H857 520 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 NANOGQ9H9S0 305 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 CDH20Q9HBT6 801 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 IL1RAPQ9NPH3 570 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 SLC2A4RGQ9NR83 387 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 ACSS1Q9NUB1 689 aaPredicted RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 SLC25A37Q9NYZ2 338 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 MAT2BQ9NZL9 334 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 GSKIPQ9P0R6 139 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 TMEM181Q9P2C4 612 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 GLS2Q9UI32 602 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 KCNG2Q9UJ96 466 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 MRTO4Q9UKD2 239 aaKnown RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 ELF5Q9UKW6 265 aaPredicted RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 FZD4Q9ULV1 537 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 MOKQ9UQ07 419 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 FARSAQ9Y285 508 aaKnown RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 SLC17A4Q9Y2C5 497 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 CEPT1Q9Y6K0 416 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 V9GYY9 64 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 DOCK10Q96BY6 2186 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 DNAH14Q0VDD8 3507 aa3.16□□□□□ -1.9
SMG6-208ENST00000570874 YLPM1P49750 1951 aaKnown RBP3.16□□□□□ -1.9
SMG6-208ENST00000570874 PTPRBP23467 1997 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 SPTBN5Q9NRC6 3674 aaKnown RBP3.15□□□□□ -1.91
SMG6-208ENST00000570874 TRBV5-3A0A0A0MS03 114 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 IGHV1OR15-9A0A0B4J2B8 117 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 hCG_38984A0A1B0GV85 526 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 A0A1W2PP18 115 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 TCRBV5S2A0A599 114 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 A6NNC1 897 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 E9PLN8 166 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 CXCR6O00574 342 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 DLEU1O43261 78 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 PAX4O43316 350 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 ZNF749O43361 778 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 LAMTOR5O43504 91 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 CHST1O43916 411 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 SRPX2O60687 465 aaPredicted RBP3.15□□□□□ -1.91
SMG6-208ENST00000570874 PRAMEF10O60809 474 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 CEACAM4O75871 244 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 CPSF4O95639 269 aaKnown RBP3.15□□□□□ -1.91
SMG6-208ENST00000570874 HLA-HP01893 362 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 HPXP02790 462 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 IFNW1P05000 195 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 ALDOBP05062 364 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 ISG15P05161 165 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 ADH4P08319 380 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 ADRB1P08588 477 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 SLC35G4P0C7Q5 338 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 C1GALT1C1LP0DN25 315 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 LAMP1P11279 417 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 GYPEP15421 78 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 CELP19835 753 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 CD33P20138 364 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 FASP25445 335 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 CD1CP29017 333 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 SLC6A1P30531 599 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 PTGER1P34995 402 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 VEGFCP49767 419 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 GSK3BP49841 420 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 HLCSP50747 726 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 CCR6P51684 374 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 NR0B1P51843 470 aaKnown RBP3.15□□□□□ -1.91
SMG6-208ENST00000570874 RAG2P55895 527 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 RAB2AP61019 212 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 RANP62826 216 aaKnown RBP3.15□□□□□ -1.91
SMG6-208ENST00000570874 MRPS11P82912 194 aaKnown RBP3.15□□□□□ -1.91
SMG6-208ENST00000570874 NHLH2Q02577 135 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 CFHR1Q03591 330 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 ST3GAL3Q11203 375 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 ZP4Q12836 540 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 TPBGQ13641 420 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 MAPK14Q16539 360 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 DUSP7Q16829 419 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 ST3GAL2Q16842 350 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 DGUOKQ16854 277 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 FGD3Q5JSP0 725 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 TIMM23BQ5SRD1 257 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 HLA-DQA1Q5Y7H0 255 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 C22orf42Q6IC83 251 aa3.15□□□□□ -1.91
SMG6-208ENST00000570874 MFSD12Q6NUT3 480 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms