RNA–Protein interactions for RNA: ENST00000570086.5

CMC2-222, Transcript of C-X9-C motif containing 2, human

TSL 3

Gene CMC2, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-222	ENST00000570086	C1QTNF6	Q9BXI9	259 aa		13.65	□□□□□ -0.22
CMC2-222	ENST00000570086	C1QTNF5	Q9BXJ0	243 aa		13.65	□□□□□ -0.22
CMC2-222	ENST00000570086	PBOV1	Q9GZY1	135 aa		13.65	□□□□□ -0.22
CMC2-222	ENST00000570086	COMMD4	Q9H0A8	199 aa		13.65	□□□□□ -0.22
CMC2-222	ENST00000570086	NDUFB11	Q9NX14	153 aa		13.65	□□□□□ -0.22
CMC2-222	ENST00000570086	NPAP1	Q9NZP6	1156 aa		13.65	□□□□□ -0.22
CMC2-222	ENST00000570086	GTF2A1L	Q9UNN4	478 aa		13.65	□□□□□ -0.22
CMC2-222	ENST00000570086	LCAT	P04180	440 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	ISG15	P05161	165 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	UBC	P0CG48	685 aa	Known RBP	13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	EPX	P11678	715 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	PLA2G2A	P14555	144 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	PSMA1	P25786	263 aa	Known RBP	13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	PCSK6	P29122	969 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	GABRA5	P31644	462 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	ZNF83	P51522	516 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	HGFAC	Q04756	655 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	SSX1	Q16384	188 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	UNQ6126/PRO20091	Q6UXV3	157 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	C22orf34	Q6ZV56	151 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	FAM57B	Q71RH2	274 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	MS4A15	Q8N5U1	240 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	OR5AK2	Q8NH90	309 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	APOBEC3D	Q96AK3	386 aa	Predicted RBP	13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	TMIGD2	Q96BF3	282 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	YIPF6	Q96EC8	236 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	PGAM5	Q96HS1	289 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	PGLYRP3	Q96LB9	341 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	OR10A2	Q9H208	303 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	BRD7	Q9NPI1	651 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	TBCCD1	Q9NVR7	557 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	EIF3K	Q9UBQ5	218 aa	Known RBP	13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	ZNF391	Q9UJN7	358 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	ZNF281	Q9Y2X9	895 aa		13.64	□□□□□ -0.23
CMC2-222	ENST00000570086	SMG1	Q96Q15	3661 aa	Known RBP	13.64	□□□□□ -0.23
CMC2-222	ENST00000570086		A0A0U1RQV5	110 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	PNMA8C	A0A1B0GUJ8	204 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	TUBAL3	A6NHL2	446 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086		M0R1B8	84 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	ZFPL1	O95159	310 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	TTR	P02766	147 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	SLC2A1	P11166	492 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	CCL2	P13500	99 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	ZNF35	P13682	527 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	CD36	P16671	472 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	CCNO	P22674	350 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	PTAFR	P25105	342 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	GRN	P28799	593 aa	Known RBP	13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	TGFBR2	P37173	567 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	NAAA	Q02083	359 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	SLC3A1	Q07837	685 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	TMEM244	Q5VVB8	128 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	TMEM108	Q6UXF1	575 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	NAA40	Q86UY6	237 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	WFDC8	Q8IUA0	241 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	C1orf174	Q8IYL3	243 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	ZNF676	Q8N7Q3	588 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	OR8B12	Q8NGG6	310 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	GHSR	Q92847	366 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	DACH2	Q96NX9	599 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	PDCD1LG2	Q9BQ51	273 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	RGCC	Q9H4X1	137 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	SLC22A13	Q9Y226	551 aa		13.63	□□□□□ -0.23
CMC2-222	ENST00000570086	IGHV2OR16-5	A0A0B4J2B6	119 aa		13.62	□□□□□ -0.23
CMC2-222	ENST00000570086		J3QKU1	62 aa		13.62	□□□□□ -0.23
CMC2-222	ENST00000570086	XRCC2	O43543	280 aa		13.62	□□□□□ -0.23
CMC2-222	ENST00000570086	CRYAA	P02489	173 aa		13.62	□□□□□ -0.23
CMC2-222	ENST00000570086	ACHE	P22303	614 aa		13.62	□□□□□ -0.23
CMC2-222	ENST00000570086	GAL	P22466	123 aa		13.62	□□□□□ -0.23
CMC2-222	ENST00000570086	TUBG1	P23258	451 aa		13.62	□□□□□ -0.23
CMC2-222	ENST00000570086	WNT5A	P41221	380 aa		13.62	□□□□□ -0.23
CMC2-222	ENST00000570086	SNAI3	Q3KNW1	292 aa		13.62	□□□□□ -0.23
CMC2-222	ENST00000570086	TIMM50	Q3ZCQ8	353 aa		13.62	□□□□□ -0.23
CMC2-222	ENST00000570086	YIF1B	Q5BJH7	314 aa		13.62	□□□□□ -0.23
CMC2-222	ENST00000570086	SATL1	Q86VE3	508 aa		13.62	□□□□□ -0.23
CMC2-222	ENST00000570086	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.62	□□□□□ -0.23
CMC2-222	ENST00000570086	CCDC54	Q8NEL0	328 aa		13.62	□□□□□ -0.23
CMC2-222	ENST00000570086	OR5L1	Q8NGL2	311 aa		13.62	□□□□□ -0.23
CMC2-222	ENST00000570086	ITFG2	Q969R8	447 aa		13.62	□□□□□ -0.23
CMC2-222	ENST00000570086	ZC3HAV1L	Q96H79	300 aa	Known RBP	13.62	□□□□□ -0.23
CMC2-222	ENST00000570086	KCNS3	Q9BQ31	491 aa		13.62	□□□□□ -0.23
CMC2-222	ENST00000570086	TUBG2	Q9NRH3	451 aa		13.62	□□□□□ -0.23
CMC2-222	ENST00000570086	SF3B6	Q9Y3B4	125 aa	Known RBP	13.62	□□□□□ -0.23
CMC2-222	ENST00000570086	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.62	□□□□□ -0.23
CMC2-222	ENST00000570086	TBX1	O43435	398 aa		13.61	□□□□□ -0.23
CMC2-222	ENST00000570086	SERPINA3	P01011	423 aa		13.61	□□□□□ -0.23
CMC2-222	ENST00000570086	IGLV3-1	P01715	115 aa		13.61	□□□□□ -0.23
CMC2-222	ENST00000570086	HLA-DPB1	P04440	258 aa		13.61	□□□□□ -0.23
CMC2-222	ENST00000570086	CFL1	P23528	166 aa	Known RBP	13.61	□□□□□ -0.23
CMC2-222	ENST00000570086	CD40	P25942	277 aa		13.61	□□□□□ -0.23
CMC2-222	ENST00000570086	RAD52	P43351	418 aa		13.61	□□□□□ -0.23
CMC2-222	ENST00000570086	ALKBH2	Q6NS38	261 aa		13.61	□□□□□ -0.23
CMC2-222	ENST00000570086	LINC01560	Q8TB33	94 aa		13.61	□□□□□ -0.23
CMC2-222	ENST00000570086	SSC4D	Q8WTU2	575 aa		13.61	□□□□□ -0.23
CMC2-222	ENST00000570086	THRSP	Q92748	146 aa		13.61	□□□□□ -0.23
CMC2-222	ENST00000570086	PPP1R14A	Q96A00	147 aa		13.61	□□□□□ -0.23
CMC2-222	ENST00000570086	FUNDC2	Q9BWH2	189 aa		13.61	□□□□□ -0.23
CMC2-222	ENST00000570086	OPA3	Q9H6K4	179 aa		13.61	□□□□□ -0.23
CMC2-222	ENST00000570086	BATF3	Q9NR55	127 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms