RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 SOX2P48431 317 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 ECH1Q13011 328 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 SGCAQ16586 387 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 SLC25A35Q3KQZ1 300 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 OTPQ5XKR4 325 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 CFAP77Q6ZQR2 320 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 SYT9Q86SS6 491 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 LRRTM1Q86UE6 522 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 OR8H2Q8N162 312 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 SAMD12Q8N8I0 201 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 POC5Q8NA72 575 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 OR10S1Q8NGN2 331 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 NABP1Q96AH0 204 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 RBM24Q9BX46 236 aaKnown RBP12.86□□□□□ -0.35
COMMD4-221ENST00000567935 PPP1R3EQ9H7J1 279 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 BCO1Q9HAY6 547 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 FBXL3Q9UKT7 428 aa12.86□□□□□ -0.35
COMMD4-221ENST00000567935 LOC107986453A0A1B0GWG9 222 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 IL7P13232 177 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 RFC3P40938 356 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 CAPZA1P52907 286 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 PCBD1P61457 104 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 PITPNAQ00169 270 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 SCRN3Q0VDG4 424 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 ENDOGQ14249 297 aaKnown RBP12.85□□□□□ -0.35
COMMD4-221ENST00000567935 PYDC2Q56P42 97 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 UBE2NLQ5JXB2 153 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 PHYHD1Q5SRE7 291 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 HACD4Q5VWC8 232 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 PYHIN1Q6K0P9 492 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 ASB5Q8WWX0 329 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 PPP1R14BQ96C90 147 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 KCNJ15Q99712 375 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 SMAD5Q99717 465 aaKnown RBP12.85□□□□□ -0.35
COMMD4-221ENST00000567935 ZNF416Q9BWM5 594 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 PBOV1Q9GZY1 135 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 LDAHQ9H6V9 325 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 BRD7Q9NPI1 651 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 PNRC2Q9NPJ4 139 aaKnown RBP12.85□□□□□ -0.35
COMMD4-221ENST00000567935 EXTL2Q9UBQ6 330 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 SLC5A6Q9Y289 635 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 NOSIPQ9Y314 301 aaKnown RBP12.85□□□□□ -0.35
COMMD4-221ENST00000567935 ZNF175Q9Y473 711 aa12.85□□□□□ -0.35
COMMD4-221ENST00000567935 MRPL33O75394 65 aaKnown RBP12.84□□□□□ -0.35
COMMD4-221ENST00000567935 IGHG3P01860 377 aa12.84□□□□□ -0.35
COMMD4-221ENST00000567935 HLA-DQB1P01920 261 aa12.84□□□□□ -0.35
COMMD4-221ENST00000567935 SLC2A2P11168 524 aaPredicted RBP12.84□□□□□ -0.35
COMMD4-221ENST00000567935 FCGR2AP12318 317 aa12.84□□□□□ -0.35
COMMD4-221ENST00000567935 ELK1P19419 428 aa12.84□□□□□ -0.35
COMMD4-221ENST00000567935 IL18Q14116 193 aa12.84□□□□□ -0.35
COMMD4-221ENST00000567935 RDH10Q8IZV5 341 aa12.84□□□□□ -0.35
COMMD4-221ENST00000567935 ZNF433Q8N7K0 673 aaPredicted RBP12.84□□□□□ -0.35
COMMD4-221ENST00000567935 NKAIN3Q8N8D7 197 aa12.84□□□□□ -0.35
COMMD4-221ENST00000567935 OR13C3Q8NGS6 347 aa12.84□□□□□ -0.35
COMMD4-221ENST00000567935 OR10AC1Q8NH08 325 aa12.84□□□□□ -0.35
COMMD4-221ENST00000567935 ABHD3Q8WU67 409 aa12.84□□□□□ -0.35
COMMD4-221ENST00000567935 C15orf40Q8WUR7 153 aa12.84□□□□□ -0.35
COMMD4-221ENST00000567935 RAB40AQ8WXH6 277 aa12.84□□□□□ -0.35
COMMD4-221ENST00000567935 ZNF845Q96IR2 970 aaPredicted RBP12.84□□□□□ -0.35
COMMD4-221ENST00000567935 PRRG4Q9BZD6 226 aa12.84□□□□□ -0.35
COMMD4-221ENST00000567935 HDHD2Q9H0R4 259 aa12.84□□□□□ -0.35
COMMD4-221ENST00000567935 SLCO5A1Q9H2Y9 848 aa12.84□□□□□ -0.35
COMMD4-221ENST00000567935 EXO5Q9H790 373 aa12.84□□□□□ -0.35
COMMD4-221ENST00000567935 TMEM38BQ9NVV0 291 aa12.84□□□□□ -0.35
COMMD4-221ENST00000567935 LUZP4Q9P127 313 aa12.84□□□□□ -0.35
COMMD4-221ENST00000567935 A0A1B0GVI7 797 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 RPL36A-HNRNPH2H7BZ11 118 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 TFECO14948 347 aaPredicted RBP12.83□□□□□ -0.36
COMMD4-221ENST00000567935 RER1O15258 196 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 FARS2O95363 451 aaKnown RBP12.83□□□□□ -0.36
COMMD4-221ENST00000567935 TTRP02766 147 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 ACSM4P0C7M7 580 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 CD37P11049 281 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 ZNF24P17028 368 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 IGFBP3P17936 291 aaPredicted RBP12.83□□□□□ -0.36
COMMD4-221ENST00000567935 PITPNBP48739 271 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 ASAH1Q13510 395 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 RAB35Q15286 201 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 ELFN2Q5R3F8 820 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 TRIQKQ629K1 86 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 GLT8D1Q68CQ7 371 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 IGFL3Q6UXB1 125 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 LUZP2Q86TE4 346 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 Q8N402 240 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 ZADH2Q8N4Q0 377 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 OR51A4Q8NGJ6 313 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 SPTSSAQ969W0 71 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 FOXRED1Q96CU9 486 aaPredicted RBP12.83□□□□□ -0.36
COMMD4-221ENST00000567935 GFI1Q99684 422 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 CRLF2Q9HC73 371 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 NCOA6Q14686 2063 aaPredicted RBP12.83□□□□□ -0.36
COMMD4-221ENST00000567935 ABCA2Q9BZC7 2435 aa12.83□□□□□ -0.36
COMMD4-221ENST00000567935 PHF3Q92576 2039 aaKnown RBP12.83□□□□□ -0.36
COMMD4-221ENST00000567935 SYT7O43581 403 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 KRT33AO76009 404 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 UBL3O95164 117 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 EIF4EP06730 217 aaKnown RBP12.82□□□□□ -0.36
COMMD4-221ENST00000567935 YES1P07947 543 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 CSF3P09919 207 aa12.82□□□□□ -0.36
COMMD4-221ENST00000567935 ADRA2CP18825 462 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms