RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 HLA-DQA2P01906 255 aa23.17■■□□□ 1.3
UBFD1-206ENST00000566669 SEMG1P04279 462 aa23.17■■□□□ 1.3
UBFD1-206ENST00000566669 RNASE1P07998 156 aaKnown RBP23.17■■□□□ 1.3
UBFD1-206ENST00000566669 HIST1H1CP16403 213 aaKnown RBP23.17■■□□□ 1.3
UBFD1-206ENST00000566669 CD80P33681 288 aa23.17■■□□□ 1.3
UBFD1-206ENST00000566669 RAD23AP54725 363 aa23.17■■□□□ 1.3
UBFD1-206ENST00000566669 TRAP1Q12931 704 aaKnown RBP23.17■■□□□ 1.3
UBFD1-206ENST00000566669 GK2Q14410 553 aaPredicted RBP23.17■■□□□ 1.3
UBFD1-206ENST00000566669 SAMD4BQ5PRF9 694 aaKnown RBP23.17■■□□□ 1.3
UBFD1-206ENST00000566669 OTPQ5XKR4 325 aa23.17■■□□□ 1.3
UBFD1-206ENST00000566669 CORO6Q6QEF8 472 aa23.17■■□□□ 1.3
UBFD1-206ENST00000566669 DCDC5Q6ZRR9 648 aa23.17■■□□□ 1.3
UBFD1-206ENST00000566669 PGAP1Q75T13 922 aa23.17■■□□□ 1.3
UBFD1-206ENST00000566669 PARP8Q8N3A8 854 aa23.17■■□□□ 1.3
UBFD1-206ENST00000566669 FAM86B1Q8N7N1 296 aa23.17■■□□□ 1.3
UBFD1-206ENST00000566669 BHLHE23Q8NDY6 225 aa23.17■■□□□ 1.3
UBFD1-206ENST00000566669 OR4K13Q8NH42 304 aa23.17■■□□□ 1.3
UBFD1-206ENST00000566669 ZNF420Q8TAQ5 688 aaPredicted RBP23.17■■□□□ 1.3
UBFD1-206ENST00000566669 TMEM246Q9BRR3 403 aa23.17■■□□□ 1.3
UBFD1-206ENST00000566669 F5H5P2 479 aa23.16■■□□□ 1.3
UBFD1-206ENST00000566669 KRT36O76013 467 aa23.16■■□□□ 1.3
UBFD1-206ENST00000566669 CYB5R3P00387 301 aaPredicted RBP23.16■■□□□ 1.3
UBFD1-206ENST00000566669 FABP3P05413 133 aa23.16■■□□□ 1.3
UBFD1-206ENST00000566669 CD200P41217 278 aa23.16■■□□□ 1.3
UBFD1-206ENST00000566669 GSSP48637 474 aa23.16■■□□□ 1.3
UBFD1-206ENST00000566669 PITPNBP48739 271 aa23.16■■□□□ 1.3
UBFD1-206ENST00000566669 NPY4RP50391 375 aa23.16■■□□□ 1.3
UBFD1-206ENST00000566669 IL13RA1P78552 427 aa23.16■■□□□ 1.3
UBFD1-206ENST00000566669 TSPAN31Q12999 210 aa23.16■■□□□ 1.3
UBFD1-206ENST00000566669 RSPO1Q2MKA7 263 aaPredicted RBP23.16■■□□□ 1.3
UBFD1-206ENST00000566669 PLPP7Q8NBV4 271 aa23.16■■□□□ 1.3
UBFD1-206ENST00000566669 OR52L1Q8NGH7 329 aa23.16■■□□□ 1.3
UBFD1-206ENST00000566669 OR4C15Q8NGM1 316 aa23.16■■□□□ 1.3
UBFD1-206ENST00000566669 GNPDA2Q8TDQ7 276 aa23.16■■□□□ 1.3
UBFD1-206ENST00000566669 SPRYD4Q8WW59 207 aaPredicted RBP23.16■■□□□ 1.3
UBFD1-206ENST00000566669 NSMCE2Q96MF7 247 aa23.16■■□□□ 1.3
UBFD1-206ENST00000566669 ELAC2Q9BQ52 826 aaKnown RBP23.16■■□□□ 1.3
UBFD1-206ENST00000566669 IL1RAPQ9NPH3 570 aa23.16■■□□□ 1.3
UBFD1-206ENST00000566669 TRIM36Q9NQ86 728 aa23.16■■□□□ 1.3
UBFD1-206ENST00000566669 NDE1Q9NXR1 346 aa23.16■■□□□ 1.3
UBFD1-206ENST00000566669 CLN8Q9UBY8 286 aa23.16■■□□□ 1.3
UBFD1-206ENST00000566669 KIR2DS1A0A191URI9 304 aa23.15■■□□□ 1.3
UBFD1-206ENST00000566669 POM121CA8CG34 1229 aa23.15■■□□□ 1.3
UBFD1-206ENST00000566669 LCATP04180 440 aa23.15■■□□□ 1.3
UBFD1-206ENST00000566669 ZNF823P16415 610 aa23.15■■□□□ 1.3
UBFD1-206ENST00000566669 CFAP77Q6ZQR2 320 aa23.15■■□□□ 1.3
UBFD1-206ENST00000566669 H0YL77 283 aa23.14■■□□□ 1.29
UBFD1-206ENST00000566669 GMDSO60547 372 aa23.14■■□□□ 1.29
UBFD1-206ENST00000566669 GPANK1O95872 356 aa23.14■■□□□ 1.29
UBFD1-206ENST00000566669 PLATP00750 562 aa23.14■■□□□ 1.29
UBFD1-206ENST00000566669 GGT2P36268 569 aa23.14■■□□□ 1.29
UBFD1-206ENST00000566669 PRR31Q5SQ13 230 aa23.14■■□□□ 1.29
UBFD1-206ENST00000566669 ZNF620Q6ZNG0 422 aa23.14■■□□□ 1.29
UBFD1-206ENST00000566669 MRPL21Q7Z2W9 205 aaKnown RBP23.14■■□□□ 1.29
UBFD1-206ENST00000566669 PGAM4Q8N0Y7 254 aa23.14■■□□□ 1.29
UBFD1-206ENST00000566669 RNF148Q8N7C7 305 aa23.14■■□□□ 1.29
UBFD1-206ENST00000566669 DACT3Q96B18 629 aaPredicted RBP23.14■■□□□ 1.29
UBFD1-206ENST00000566669 OPA3Q9H6K4 179 aa23.14■■□□□ 1.29
UBFD1-206ENST00000566669 ZNF696Q9H7X3 374 aa23.14■■□□□ 1.29
UBFD1-206ENST00000566669 KIF17Q9P2E2 1029 aa23.14■■□□□ 1.29
UBFD1-206ENST00000566669 MZT1Q08AG7 82 aa23.13■■□□□ 1.29
UBFD1-206ENST00000566669 CD276Q5ZPR3 534 aa23.13■■□□□ 1.29
UBFD1-206ENST00000566669 LINC00346Q8IVM7 164 aa23.13■■□□□ 1.29
UBFD1-206ENST00000566669 SPERTQ8NA61 448 aa23.13■■□□□ 1.29
UBFD1-206ENST00000566669 OR2T4Q8NH00 348 aa23.13■■□□□ 1.29
UBFD1-206ENST00000566669 WDR76Q9H967 626 aa23.13■■□□□ 1.29
UBFD1-206ENST00000566669 FN3KRPQ9HA64 309 aa23.13■■□□□ 1.29
UBFD1-206ENST00000566669 PCDHGB1Q9Y5G3 927 aa23.13■■□□□ 1.29
UBFD1-206ENST00000566669 OR6C68A6NDL8 312 aa23.12■■□□□ 1.29
UBFD1-206ENST00000566669 M0R135 149 aa23.12■■□□□ 1.29
UBFD1-206ENST00000566669 NDUFA2O43678 99 aa23.12■■□□□ 1.29
UBFD1-206ENST00000566669 LIPFP07098 398 aa23.12■■□□□ 1.29
UBFD1-206ENST00000566669 RRM2P31350 389 aa23.12■■□□□ 1.29
UBFD1-206ENST00000566669 HNRNPA0Q13151 305 aaKnown RBP23.12■■□□□ 1.29
UBFD1-206ENST00000566669 SDR9C7Q8NEX9 313 aa23.12■■□□□ 1.29
UBFD1-206ENST00000566669 SLCO4A1Q96BD0 722 aa23.12■■□□□ 1.29
UBFD1-206ENST00000566669 ZNF799Q96GE5 643 aa23.12■■□□□ 1.29
UBFD1-206ENST00000566669 NUDT16L1Q9BRJ7 211 aaKnown RBP23.12■■□□□ 1.29
UBFD1-206ENST00000566669 PNRC2Q9NPJ4 139 aaKnown RBP23.12■■□□□ 1.29
UBFD1-206ENST00000566669 V9GYQ6 96 aa23.12■■□□□ 1.29
UBFD1-206ENST00000566669 ENSAO43768 121 aaKnown RBP23.11■■□□□ 1.29
UBFD1-206ENST00000566669 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.11■■□□□ 1.29
UBFD1-206ENST00000566669 MAB21L1Q13394 359 aa23.11■■□□□ 1.29
UBFD1-206ENST00000566669 OR8G1Q15617 311 aa23.11■■□□□ 1.29
UBFD1-206ENST00000566669 C11orf91Q3C1V1 193 aa23.11■■□□□ 1.29
UBFD1-206ENST00000566669 DRAM2Q6UX65 266 aa23.11■■□□□ 1.29
UBFD1-206ENST00000566669 BCL6BQ8N143 479 aaPredicted RBP23.11■■□□□ 1.29
UBFD1-206ENST00000566669 MRPL15Q9P015 296 aaKnown RBP23.11■■□□□ 1.29
UBFD1-206ENST00000566669 CD300AQ9UGN4 299 aa23.11■■□□□ 1.29
UBFD1-206ENST00000566669 CDH10Q9Y6N8 788 aa23.11■■□□□ 1.29
UBFD1-206ENST00000566669 SNX3O60493 162 aa23.1■■□□□ 1.29
UBFD1-206ENST00000566669 ZNF205O95201 554 aa23.1■■□□□ 1.29
UBFD1-206ENST00000566669 PTBP3O95758 552 aaKnown RBP23.1■■□□□ 1.29
UBFD1-206ENST00000566669 HLA-DPB1P04440 258 aa23.1■■□□□ 1.29
UBFD1-206ENST00000566669 HMGA2P52926 109 aa23.1■■□□□ 1.29
UBFD1-206ENST00000566669 WDR25Q64LD2 544 aaPredicted RBP23.1■■□□□ 1.29
UBFD1-206ENST00000566669 PROKR2Q8NFJ6 384 aa23.1■■□□□ 1.29
UBFD1-206ENST00000566669 ZNF48Q96MX3 618 aaPredicted RBP23.1■■□□□ 1.29
UBFD1-206ENST00000566669 RNF7Q9UBF6 113 aa23.1■■□□□ 1.29
UBFD1-206ENST00000566669 CD300LBA8K4G0 201 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms